BAC Information

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BAC

Clone NameB6Ng01-077O06
Chromosome8 (Build37)
Map Location 32,270,675 - 32,271,792
singlet/doubletsinglet
Overlap geneBC019943, Rbm13
Upstream geneEG628189, LOC547008, Dusp26, Rnf122
Downstream geneFut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077O06.bB6Ng01-077O06.g
ACCDH893747DH893748
length1,2761,106
definitionDH893747|Mus musculus domesticus DNA, BAC clone: B6Ng01-077O06, 5' end.DH893748|Mus musculus domesticus DNA, BAC clone: B6Ng01-077O06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgatcttcctgccaatctactgtaggaccacgaaaggcagcct
ggttcttggtcaagcacaggcctgaaacccctgtgaccctgagggatgtc
aggcgctttggcaggctcccggacactagaatcctgacacaaggctgcag
tgtctttcagtcacataaggtcaaggccccaagcccctccacagatagag
gacaagaccacaggtcacatagcatcaagacaaatctccattttaatgaa
atacttaaaggccttcaggacttagccaattaaactccccttccaagaca
ctcctccctgaaaaaggtatttaacctcaggcccaccctgagaaagtgag
atacggttttcactcttctactttcggccatgacaagaaatgccttaaaa
tcaaggactgcctcttttcatcaggatctactgtggggagccatgagaag
aaggcctttgccaaacgagctggccctttcagcgctctcagccacagcct
ccaccaagccaagccaccagcggcacctgggtgcccaagagcctgagaac
cagaaagccccaaactccttgcaggtccagggatcctcgagctagcccaa
taccctccctacaccagcgtggggtaagcacagtcaacgttccaagtccc
acctccccaagtgacccgaaccctgtggcagagtggatgcaggacaccca
aaccctacagtataccaccatacccaattcactatgtacccttgggggcc
ctggaactcactatgaacattagagtagcatcacactcagagatctacct
tcctttgcctccggcgagctaagaagaacgctgtgcaccaccacccaccc
cagccagggctctgatctcacttcttctctcttgtctttgccatagatcc
ctttccagaagcttccataaaagccatcctgttacttcttttgaaaacgt
tcaccaaaacttaccattggccacatgagcctatgactgacaaatttaga
gagccccttcgtaccacccaatcctacttgagctgaactgcagaatggcc
acccattcatggtagaagcctcctccctcgggcactcaaaatggacggct
ccctctctggacgtcaatccaccctcctccttcttagtagcagttacttt
ggaacagaaaacccgcgtgactgagctactctcagaactcaagcttagtc
catttcttaggtgagtacgggttcaaaggcagtaaactctgctggacccg
cacagatatataggttttgagaacac
gaattcatctgttagattccttgggctcaagctgttacagcatgtgttat
aaaaatacgcctctcaactcaaggctcttcatactcactccagatttcgg
ctccactgaagtgacataaatattaacaatataaatactttaggaaacag
aacacacaagagcacagctgccagtgtgaagggaactcatgtggctttga
ctttggccatgggctctgtctcctgttcatactctatttccacataggcc
cgttttttccgtaaaggtcctttcaagggtgctttgcctttgtgcttagc
cttatgagcctcttcatcattggaggattcatcatcctggtcttcctcac
tgtcagtattcagtttatccatatcctaatatgtagaaacagagagtcag
accagggaaagtgcaagccttctcctacgcccctcattgcgcagctggtt
caaaacaaaccatgcgtttgttcctttgctcctgtgttcagacccactcc
cctatccccccttccttgctgtggccacaagccattctttatcccacaga
gctcacctcaaagtcactcaggtcactctcctccacctcctcatcttcta
caaactctcttttccccacatcctagaaggaaacagtcactgggttagga
ataatggtactgaagattgagtcttaacatctaggtttacctcgttccat
aaagtgagtcagtctgcacacacagccaccaaaacctattactctcaagg
ttcacacatacaaattaaaaggaaaaatcagggacacatgtaaaagtcaa
cacagaatcatcacaagatacaaaaggtgatggaaataatgtcgcctctg
ggaacaaaaaaaaaaatttgggaacaaaatacccatggaagagttacaga
gacaaagtttggagctgagacgaaaggatggaccatctagagactgccat
atccgggatctatcccataatcagcctcaaacgctgacacattgcataca
ctagcaagattttgctgaaaggaccctgatacagctgttcttggtgaact
atgctgggcctagcaaatcttatgatgctcatagtcagctatgaatgaat
cacagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32270675_32271792
seq2: B6Ng01-077O06.g_70_1175

seq1  GAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTTAT  50

seq1  AAAAATACGCCTCTCAACTCAAGGCTCTTCATACTCACTCCAGATTTCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACGCCTCTCAACTCAAGGCTCTTCATACTCACTCCAGATTTCGG  100

seq1  CTCCACTGAAGTGACATAAATATTAACAATATAAATACTTTAGGAAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTGAAGTGACATAAATATTAACAATATAAATACTTTAGGAAACAG  150

seq1  AACACACAAGAGCACAGCTGCCAGTGTGAAGGGAACTCATGTGGCTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACAAGAGCACAGCTGCCAGTGTGAAGGGAACTCATGTGGCTTTGA  200

seq1  CTTTGGCCATGGGCTCTGTCTCCTGTTCATACTCTATTTCCACATAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCCATGGGCTCTGTCTCCTGTTCATACTCTATTTCCACATAGGCC  250

seq1  CGTTTTTTCCGTAAAGGTCCTTTCAAGGGTGCTTTGCCTTTGTGCTTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTTCCGTAAAGGTCCTTTCAAGGGTGCTTTGCCTTTGTGCTTAGC  300

seq1  CTTATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCAC  350

seq1  TGTCAGTATTCAGTTTATCCATATCCTAATATGTAGAAACAGAGAGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTATTCAGTTTATCCATATCCTAATATGTAGAAACAGAGAGTCAG  400

seq1  ACCAGGGAAAGTGCAAGCCTTCTCCTACGCCCCTCATTGCGCAGCTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGAAAGTGCAAGCCTTCTCCTACGCCCCTCATTGCGCAGCTGGTT  450

seq1  CAAAACAAACCATGCGTTTGTTCCTTTGCTCCTGTGTTCAGACCCACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAACCATGCGTTTGTTCCTTTGCTCCTGTGTTCAGACCCACTCC  500

seq1  CCTATCCCCCCTTCCTTGCTGTGGCCACAAGCCATTCTTTATCCCACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCCCCCTTCCTTGCTGTGGCCACAAGCCATTCTTTATCCCACAGA  550

seq1  GCTCACCTCAAAGTCACTCAGGTCACTCTCCTCCACCTCCTCATCTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCTCAAAGTCACTCAGGTCACTCTCCTCCACCTCCTCATCTTCTA  600

seq1  CAAACTCTCTTTTCCCCACATCCTAGAAGGAAACAGTCACTGGGTTAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTCTTTTCCCCACATCCTAGAAGGAAACAGTCACTGGGTTAGGA  650

seq1  ATAATGGTACTGAAGATTGAGTCTTAACATCTAGGTTTACCTCGTTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGTACTGAAGATTGAGTCTTAACATCTAGGTTTACCTCGTTCCAT  700

seq1  AAAGTGAGTCAGTCTGCACACACAGCCACCAAAACCTATTACTCTCAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGTCAGTCTGCACACACAGCCACCAAAACCTATTACTCTCAAGG  750

seq1  TTCACACATACAAATTAAAAGGAAAAATCAGGGACACATGTAAAAGTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACATACAAATTAAAAGGAAAAATCAGGGACACATGTAAAAGTCAA  800

seq1  CACAGAATCATCACAAGATACAAAAGGTGATGGAAATAATGTCGCCTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAATCATCACAAGATACAAAAGGTGATGGAAATAATGTCGCCTCTG  850

seq1  GGAACAAAAAAAAAAAATTTGGGAACAAAATACCCATGGAAGGAGTTACA  900
      ||||| ||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGAAC-AAAAAAAAAAATTTGGGAACAAAATACCCATGGAA-GAGTTACA  898

seq1  GAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCC  948

seq1  ATATCCGGGGATCTATCCCATAATCAGCCTCCAAACGCTGACACCATTGC  1000
      |||||| ||||||||||||||||||||||| |||||||||||| ||||||
seq2  ATATCC-GGGATCTATCCCATAATCAGCCT-CAAACGCTGACA-CATTGC  995

seq1  ATACACTAGCAAGATTTTGCTGAAAGGACCCTGATACAGCTGTCTCTT-G  1049
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  ATACACTAGCAAGATTTTGCTGAAAGGACCCTGATACAGCTGT-TCTTGG  1044

seq1  TGACACTATGCTGGGGCCTAGCAAATACATAAGTGGATGCTCATAGTCAG  1099
      ||| |||||||| ||||||||||||| | ||    |||||||||||||||
seq2  TGA-ACTATGCT-GGGCCTAGCAAAT-CTTA---TGATGCTCATAGTCAG  1088

seq1  CTATTGAATGGATCACAGG  1118
      ||| |||||| ||||||||
seq2  CTA-TGAATGAATCACAGG  1106