BAC Information

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BAC

Clone NameB6Ng01-078F16
Chromosome8 (Build37)
Map Location 42,834,524 - 43,068,098
singlet/doubletdoublet
Overlap geneLOC671994
Upstream geneAdam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl, Mtus1, Fgl1, Pcm1, Asah1, Frg1, LOC100039376, Gm1815
Downstream geneZfp353, EG620772, LOC628212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078F16.bB6Ng01-078F16.g
ACCDH894074DH894075
length1,174704
definitionDH894074|Mus musculus domesticus DNA, BAC clone: B6Ng01-078F16, 5' end.DH894075|Mus musculus domesticus DNA, BAC clone: B6Ng01-078F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,834,524 - 42,835,707)(43,067,399 - 43,068,098)
sequence
gaattctgggagaccctagaggacaggtctgctttgataggtaaaatttg
cacctcagtcccttgtcccagaactgaaaccaaacaaaggttaccaccaa
agcccaagttggggagcagattagtttttttttagtgttacttataagag
tgtaggcaaaatgttacttacaggagcccaaatacctcaaaaaatatgtc
accgaaaacctatgcagcatgtgtaatgatagcttgcttacaaatgctgg
aaccccagagttcactaaataactagaaggcacctccacaggttagagag
attctctgcaaggtagcttggctaatctgagaatatctgaggactctggt
cagtttcagggacttcctaaagcttcttatttgttcacttcctgagtctc
ccttttgtacaacctaagttttaagtcacttctttgtgggacagaatgtt
tcatgtccttttagcacatctagtcttaatcagcttttcttcaagatgga
aagtgttaacttggacatatttatacaacaaacactcagcatttagaatg
taaatgtgtatctaataatctgcatttgcctatttacattgtatacacag
acattgcacactcacaaatgatgggtcattacatgtgttacgttccaaga
aaatgatgcacataagttgtttagactagcttatgagaactgtggaagct
gaagccaacccttaccaattgcaggggattttagcttagcatggagaaat
gaagttcccacaggatgaaaaggtcagccaacttgtttctgagctctctg
ttcagccatttcaaaggagcatgggaaataatgaaacacactatattctt
aagaaaagaattagcttgtttgaagatgggactaatttagtcaatagtgg
caaactttagagagaatgaggtacattttaacacattgcaagtgttgatt
gttaaacgtgttttgacctttggcagtaaggaaccacctgaggtttattt
tgtaggagattgacacatgcaaattatgttttgttgaaaaagatgcatta
gagcagccatagttggaatgaagttgaaacttgaggtattgtaaggcaaa
tggattggatgtatcagccctggggaagtcaaaaacttacatggtgaggc
gctgttttagtatggggctagtga
gaattctccgaattaaagaatggcaaccttattgatgaaaatatcttatt
tgtgtgacactacactcgtagtttcaccactgttactgcctaaacatgaa
cggaagaaggacaacatctggcatgctgaagtggacaggcatgggtcctc
aaccaaacacaaagaactgcgggctgctaaggaatgctgagagtggggga
aatgatcttccttcagtaggaaagagcataccaaatggttacccaatacc
aaatgaagctctgaaaacatgcataacaagaaacatctaatgtttcttga
gcaggactgagcaggtagtatttaggaatatatgcctataaaaacaatta
atgaaagggagccatgaattttgaagagagcaaggaggagtagataggag
agtttggagggggaaatgatataattataatatcaaaagaataaaagtaa
taacttttaaaactggctcaaaatatgtttaaacttcaaaatacaatcca
cgtgtttctgtcttcttaacgtttgctctgatgattatgagcagaaacat
gtcactgaaagacaaaaagaaaaactaaaaatataataggtcatgcctga
tatatcaactaacatctgggaaaattatgttttattaaagagtaaagcct
ttgtaaaaatatgaaatagcatcaatgtgtagtggcattttctgaaatta
atat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_42834524_42835707
seq2: B6Ng01-078F16.b_49_1222

seq1  GAATTCTGGGAGACCCTAGAGGACAGGTCTGCTTTGATAGGTAAAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAGACCCTAGAGGACAGGTCTGCTTTGATAGGTAAAATTTG  50

seq1  CACCTCAGTCCCTTGTCCCAGAACTGAAACCAAACAAAGGTTACCACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAGTCCCTTGTCCCAGAACTGAAACCAAACAAAGGTTACCACCAA  100

seq1  AGCCCAAGTTGGGGAGCAGATTAGTTTTTTTTTAGTGTTACTTATAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAGTTGGGGAGCAGATTAGTTTTTTTTTAGTGTTACTTATAAGAG  150

seq1  TGTAGGCAAAATGTTACTTACAGGAGCCCAAATACCTCAAAAAATATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCAAAATGTTACTTACAGGAGCCCAAATACCTCAAAAAATATGTC  200

seq1  ACCGAAAACCTATGCAGCATGTGTAATGATAGCTTGCTTACAAATGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAAAACCTATGCAGCATGTGTAATGATAGCTTGCTTACAAATGCTGG  250

seq1  AACCCCAGAGTTCACTAAATAACTAGAAGGCACCTCCACAGGTTAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAGAGTTCACTAAATAACTAGAAGGCACCTCCACAGGTTAGAGAG  300

seq1  ATTCTCTGCAAGGTAGCTTGGCTAATCTGAGAATATCTGAGGACTCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGCAAGGTAGCTTGGCTAATCTGAGAATATCTGAGGACTCTGGT  350

seq1  CAGTTTCAGGGACTTCCTAAAGCTTCTTATTTGTTCACTTCCTGAGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCAGGGACTTCCTAAAGCTTCTTATTTGTTCACTTCCTGAGTCTC  400

seq1  CCTTTTGTACAACCTAAGTTTTAAGTCACTTCTTTGTGGGACAGAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTACAACCTAAGTTTTAAGTCACTTCTTTGTGGGACAGAATGTT  450

seq1  TCATGTCCTTTTAGCACATCTAGTCTTAATCAGCTTTTCTTCAAGATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCCTTTTAGCACATCTAGTCTTAATCAGCTTTTCTTCAAGATGGA  500

seq1  AAGTGTTAACTTGGACATATTTATACAACAAACACTCAGCATTTAGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTAACTTGGACATATTTATACAACAAACACTCAGCATTTAGAATG  550

seq1  TAAATGTGTATCTAATAATCTGCATTTGCCTATTTACATTGTATACACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGTATCTAATAATCTGCATTTGCCTATTTACATTGTATACACAG  600

seq1  ACATTGCACACTCACAAATGATGGGTCATTACATGTGTTACGTTCCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCACACTCACAAATGATGGGTCATTACATGTGTTACGTTCCAAGA  650

seq1  AAATGATGCACATAAGTTGTTTAGACTAGCTTATGAGAACTGTGGAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGCACATAAGTTGTTTAGACTAGCTTATGAGAACTGTGGAAGCT  700

seq1  GAAGCCAACCCTTACCAATTGCAGGGGATTTTAGCTTAGCATGGAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAACCCTTACCAATTGCAGGGGATTTTAGCTTAGCATGGAGAAAT  750

seq1  GAAGTTCCCACAGGATGAAAAGGTCAGCCAACTTGTTTCTGAGCTCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCCCACAGGATGAAAAGGTCAGCCAACTTGTTTCTGAGCTCTCTG  800

seq1  TTCAGCCATTTCAAAGGAGCATGGGAAATAATGAAACACACTATATTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCATTTCAAAGGAGCATGGGAAATAATGAAACACACTATATTCTT  850

seq1  AAGAAAAGAATTAGCTTGTTTGAAGATGGGACTAATTTAGGTCAATAGTG  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAGAAAAGAATTAGCTTGTTTGAAGATGGGACTAATTTA-GTCAATAGTG  899

seq1  GCAAAACTTTAGAGAGAATGAGGTACATTTTAACACATTGCAAGTGTTGA  950
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GC-AAACTTTAGAGAGAATGAGGTACATTTTAACACATTGCAAGTGTTGA  948

seq1  TTTGTTAAACGTGTTTTGACCTTTGGCAGTAAGGAACCACCTGAGGTTTA  1000
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTGTTAAACGTGTTTTGACCTTTGGCAGTAAGGAACCACCTGAGGTTTA  997

seq1  TTTTGTAGGAGATTGACACATGCAAATTATGTTTTGTGAAAAAGGATTGC  1050
      |||||||||||||||||||||||||||||||||||||  |||| || |||
seq2  TTTTGTAGGAGATTGACACATGCAAATTATGTTTTGTTGAAAAAGA-TGC  1046

seq1  ATTAGAAGCAGCCATAGTTGGAATGAAGTTGAAAACTTGAGGTATTG-AA  1099
      ||||| ||||||||||||||||||||||||| ||||||||||||||| ||
seq2  ATTAG-AGCAGCCATAGTTGGAATGAAGTTG-AAACTTGAGGTATTGTAA  1094

seq1  GGCAAATGGGATTGGATGGTATCAG-CCTGGGGAAGTCAAAATCTTACAA  1148
      ||||||| ||||||||| ||||||| |||||||||||||||| ||||| |
seq2  GGCAAAT-GGATTGGAT-GTATCAGCCCTGGGGAAGTCAAAAACTTAC-A  1141

seq1  TGGTGAGGCGCTGTTATAAGGTATGGGGTCTAGTGA  1184
      ||||||||||||||| ||  |||||||| |||||||
seq2  TGGTGAGGCGCTGTTTTA--GTATGGGG-CTAGTGA  1174

seq1: chr8_43067399_43068098
seq2: B6Ng01-078F16.g_64_767 (reverse)

seq1  ATATTAATTTCAGAAAATGCCACTACACATTGATGCTATTTCATATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATTTCAGAAAATGCCACTACACATTGATGCTATTTCATATTTTT  50

seq1  ACAAAGGCTTTACTCTTTAAT-AAACATAA-TTTCCCAGATGTTAGTTGA  98
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  ACAAAGGCTTTACTCTTTAATAAAACATAATTTTCCCAGATGTTAGTTGA  100

seq1  TATATCAGGCATGACCTATTATATTTTTAGTTTTTCTTTTTGTCTTTCAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGGCATGACCTATTATATTTTTAGTTTTTCTTTTTGTCTTTCAG  150

seq1  TGACATGTTTCTGCTCATAATCATCAGAGCAAACGTTAAGAAGACAG-AA  197
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGACATGTTTCTGCTCATAATCATCAGAGCAAACGTTAAGAAGACAGAAA  200

seq1  CACGTGGATTGTATTTTGAAGTTTAAACATATTTTGAGCCAGTTTTAAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGGATTGTATTTTGAAGTTTAAACATATTTTGAGCCAGTTTTAAAA  250

seq1  GTTATTACTTTTATTCTTTTGATATTATAATTATATCATTTCCCCCTCCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTACTTTTATTCTTTTGATATTATAATTATATCATTTCCCCCTCCA  300

seq1  AACTCTCCTATCTACTCCTCCTTGCTCTCTTCAAAATTCATGGCTCCCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCCTATCTACTCCTCCTTGCTCTCTTCAAAATTCATGGCTCCCTT  350

seq1  TCATTAATTGTTTTTATAGGCATATATTCCTAAATACTACCTGCTCAGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATTGTTTTTATAGGCATATATTCCTAAATACTACCTGCTCAGTC  400

seq1  CTGCTCAAGAAACATTAGATGTTTCTTGTTATGCATGTTTTCAGAGCTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAAGAAACATTAGATGTTTCTTGTTATGCATGTTTTCAGAGCTTC  450

seq1  ATTTGGTATTGGGTAACCATTTGGTATGCTCTTTCCTACTGAAGGAAGAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTATTGGGTAACCATTTGGTATGCTCTTTCCTACTGAAGGAAGAT  500

seq1  CATTTCCCCCACTCTCAGCATTCCTTAGCAGCCCGCAGTTCTTTGTGTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCCCACTCTCAGCATTCCTTAGCAGCCCGCAGTTCTTTGTGTTT  550

seq1  GGTTGAGGACCCATGCCTGTCCACTTCAGCATGCCAGATGTTGTCCTTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGGACCCATGCCTGTCCACTTCAGCATGCCAGATGTTGTCCTTCT  600

seq1  TCCGTTCATGTTTAGGCAGTAACAGTGGTGAAACTACGAGTGTAGTGTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTTCATGTTTAGGCAGTAACAGTGGTGAAACTACGAGTGTAGTGTCA  650

seq1  CACAAATAAGATATTTTCATCAATAAGGTTGCCATTCTTTAATTC-AAGA  696
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  CACAAATAAGATATTTTCATCAATAAGGTTGCCATTCTTTAATTCGGAGA  700

seq1  ATTC  700
      ||||
seq2  ATTC  704