BAC Information

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BAC

Clone NameB6Ng01-079K15
Chromosome8 (Build37)
Map Location 112,149,277 - 112,281,577
singlet/doubletdoublet
Overlap genePkd1l3, 2400003C14Rik, 4930566A11Rik, D8Ertd587e, LOC668089
Upstream geneAtbf1, 4922502B01Rik, Gm1943, LOC100042829, Pmfbp1, Dhx38, Txnl4b, Hp, Dhodh
Downstream geneLOC672735, Ap1g1, Phlppl, Marveld3, LOC100041884, Tat, Chst4, Zfp612, Gm1467, Calb2, BC025546, Hydin, LOC672398, Vac14, BC060632, 2010004A03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079K15.bB6Ng01-079K15.g
ACCDH895007DH895008
length1,116172
definitionDH895007|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K15, 5' end.DH895008|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,149,277 - 112,150,418)(112,281,407 - 112,281,577)
sequence
gaattcagtgacgtcgcccaactcaagatatgtgtgcaacagtgagaaaa
taagacacaagcaagtgatgtagcagacacctttatcccagtactcagca
ggctgaggcaggaggattgtcaatttaaggccagcctgggctacataaat
attaagatatgccatatgatgtggcccagggtgcaaataccaaatgaggt
atgtgtctccacagctgcctatagctaggatagcatccagaaagcccagc
tactagtgggtcatgggatggcagctacagctcaccctcacatcatcatc
ttatttgcacctcagtcaaagcctcaatagagtggttctcagtctagggt
ccttctggaagtgacctctcccaggaagtgaggaataacctagtgaacca
tttagcccatgaggatggtgtgctgaggaggtggtctagcttatgacacc
ttgacacaagctagagtcatcggaaaggagaggacctcaattgagaagat
ttctccataagacccagctgtaaggcattttcttgattagtgattaaaga
ttaaccactaacgattaattagtggtgccatctctgggctggcggccctg
agttctataagaaagcaggatgagcgagccatgctgagggagccagtaag
ggacagcctttcatggcctctgcatcagctcctgcctccaggttccagcc
ccgtttgagttcccagtcccagcttccttcagtgacggactatgatgtgg
aagtgcctgcctttcctccttgaattgcctttttgtcggggaagagtttg
acaccccacctcctgctacaaaggtttttttttttcccctttgaacatga
attctttgccccattgttgagtcttgaactcagaacctagtatttctagg
taagctctctgcaaactcatgcctataatcctaccacaacatcatctact
tttatcctattcattccataagtcctactcatctctctcatgtatgaaga
ttctccctaaagtaacagcactttgagcctgtagttcatgaaactagaag
atatctgcagtgttcattacatgtaaactaactcaatgcatgaaataatt
tgtaatatttgatgaa
ttttaaacataaatccatatgtaactatctcgtggcgtgagtacatgttt
tctatacacacatgtgtaatcatgtgtgcatatatatttttatatatgct
gaaggaataggtattgcatttatgttctttctcccttccttccttctttc
cttccttccttccttacttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_112149277_112150418
seq2: B6Ng01-079K15.b_48_1163

seq1  GAATTCAGTGACGTCGCCCAACTCAAGATATGTGTGCAACAGTGAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGACGTCGCCCAACTCAAGATATGTGTGCAACAGTGAGAAAA  50

seq1  TAAGACACAAGCAAGTGATGTAGCAGACACCTTTATCCCAGTACTCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACACAAGCAAGTGATGTAGCAGACACCTTTATCCCAGTACTCAGCA  100

seq1  GGCTGAGGCAGGAGGATTGTCAATTTAAGGCCAGCCTGGGCTACATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGGCAGGAGGATTGTCAATTTAAGGCCAGCCTGGGCTACATAAAT  150

seq1  ATTAAGATATGCCATATGATGTGGCCCAGGGTGCAAATACCAAATGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGATATGCCATATGATGTGGCCCAGGGTGCAAATACCAAATGAGGT  200

seq1  ATGTGTCTCCACAGCTGCCTATAGCTAGGATAGCATCCAGAAAGCCCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTCCACAGCTGCCTATAGCTAGGATAGCATCCAGAAAGCCCAGC  250

seq1  TACTAGTGGGTCATGGGATGGCAGCTACAGCTCACCCTCACATCATCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTGGGTCATGGGATGGCAGCTACAGCTCACCCTCACATCATCATC  300

seq1  TTATTTGCACCTCAGTCAAAGCCTCAATAGAGTGGTTCTCAGTCTAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGCACCTCAGTCAAAGCCTCAATAGAGTGGTTCTCAGTCTAGGGT  350

seq1  CCTTCTGGAAGTGACCTCTCCCAGGAAGTGAGGAATAACCTAGTGAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGAAGTGACCTCTCCCAGGAAGTGAGGAATAACCTAGTGAACCA  400

seq1  TTTAGCCCATGAGGATGGTGTGCTGAGGAGGTGGTCTAGCTTATGACACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCCATGAGGATGGTGTGCTGAGGAGGTGGTCTAGCTTATGACACC  450

seq1  TTGACACAAGCTAGAGTCATCGGAAAGGAGAGGACCTCAATTGAGAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACAAGCTAGAGTCATCGGAAAGGAGAGGACCTCAATTGAGAAGAT  500

seq1  TTCTCCATAAGACCCAGCTGTAAGGCATTTTCTTGATTAGTGATTAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATAAGACCCAGCTGTAAGGCATTTTCTTGATTAGTGATTAAAGA  550

seq1  TTAACCACTAACGATTAATTAGTGGTGCCATCTCTGGGCTGGCGGCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCACTAACGATTAATTAGTGGTGCCATCTCTGGGCTGGCGGCCCTG  600

seq1  AGTTCTATAAGAAAGCAGGATGAGCGAGCCATGCTGAGGGAGCCAGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTATAAGAAAGCAGGATGAGCGAGCCATGCTGAGGGAGCCAGTAAG  650

seq1  GGACAGCCTTTCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTTCCAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCTTTCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTTCCAGCC  700

seq1  CCGTTTGAGTTCCCAGTCCCAGCTTCCTTCAGTGACGGACTATGATGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTGAGTTCCCAGTCCCAGCTTCCTTCAGTGACGGACTATGATGTGG  750

seq1  AAGTGCCTGCCTTTCCTCCTTGAATTGCCTTTTTGTCGGGGAAGAGTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCTGCCTTTCCTCCTTGAATTGCCTTTTTGTCGGGGAAGAGTTTG  800

seq1  ACACCCCACCTCCTGCTACAAAGGTTTTTTTTTTTCCCCTTTTGAACATG  850
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACACCCCACCTCCTGCTACAAAGGTTTTTTTTTTTCCCC-TTTGAACATG  849

seq1  AATTCTTTGCCCCATTGTTGAGTCTTGAACTCAGAACCTAGTATTTCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTGCCCCATTGTTGAGTCTTGAACTCAGAACCTAGTATTTCTAG  899

seq1  GTAAGCTCTCTGCAAACTCATGCCTATAATCCTACCAACAACATCATCTA  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTAAGCTCTCTGCAAACTCATGCCTATAATCCTACC-ACAACATCATCTA  948

seq1  CTTTTATCCTATTCATTCCATAAAAGTCCTACTCATCTTCTCTCATGTAT  1000
      |||||||||||||||||||||  |||||||||||||| ||||||||||||
seq2  CTTTTATCCTATTCATTCCAT--AAGTCCTACTCATC-TCTCTCATGTAT  995

seq1  GAAGGATTCTCCCTAAAGTAACAGCACTTTTGAAGCCTGTAGTTCATGAA  1050
      ||| ||||||||||||||||||||||||||   |||||||||||||||||
seq2  GAA-GATTCTCCCTAAAGTAACAGCACTTT--GAGCCTGTAGTTCATGAA  1042

seq1  ACCTAGAAGATTATCCTTGGCCAGTGTTCATTAACATGGTATACCAAACT  1100
      | |||||||| ||||  ||  ||||||||||| |||| ||| | | ||||
seq2  A-CTAGAAGA-TATC--TG--CAGTGTTCATT-ACAT-GTA-AACTAACT  1083

seq1  CCAAATGCATGAAAATAATTTTGTATAAATAATTTTGATGAA  1142
      |  |||||||| |||||| |||||   ||||  |||||||||
seq2  C--AATGCATG-AAATAA-TTTGT---AATA--TTTGATGAA  1116

seq1: chr8_112281407_112281577
seq2: B6Ng01-079K15.g_76_246 (reverse)

seq1  GGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGGAGAAAGAACAT  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGGAGAAAGAACAT  50

seq1  AAATGCAATACCTATTCCTTCAGCATATATAAAAATATATATGCACACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAATACCTATTCCTTCAGCATATATAAAAATATATATGCACACAT  100

seq1  GATTACACATGTGTGTATAGAAAACATGTACTCACGCCACGAGATAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACACATGTGTGTATAGAAAACATGTACTCACGCCACGAGATAGTTA  150

seq1  CATATGGATTTATGTTTAAAA  171
      |||||||||||||||||||||
seq2  CATATGGATTTATGTTTAAAA  171