BAC Information

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BAC

Clone NameB6Ng01-080O08
Chromosome8 (Build37)
Map Location 49,646,094 - 49,777,196
singlet/doubletdoublet
Overlap geneOdz3
Upstream geneLOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd
Downstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080O08.bB6Ng01-080O08.g
ACCDH895906DH895907
length1,0501,113
definitionDH895906|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O08, 5' end.DH895907|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,646,094 - 49,647,138)(49,776,068 - 49,777,196)
sequence
gaattcacgtaaggcactgtatgtatctttctttgtctcagaaaactaag
agctacttatttgtgagaaatggcgatggagtgtcatcagagggtttgtc
tgttctggtaccagacccaggtgccagtcggttccttcctccatgtactg
aacacaacacggaagtcatataaattttgacatttaccttttaaatttta
taatgtcaaaaaaaattttccacacgatcagcagtatcaatcatttctgc
atctacttcggaaaacacatgtagataatcagcaacgtgttggcttgtgg
tattttcatgaatcgggtacatgaaatatgtttttaatgagttctcttga
attgtgaacataaagtatgtgtagatttctttttatacttcactttgcta
aatgcttggcaaggctgcttttcacccggccaatcacagcttggtcataa
tgtgacataaaggaatttcctgattggccaggaccagctgaagggtctgg
ctgtgtgcccccattgagttgagcgaatatctttttctatccatcttcac
accatattctgctgcctgtcttcttgcccctaactcctttctgaccataa
acatttcacggagacagagactgttgggtaagggaaatggcaactgcatg
attcctctgcagactccgcaacaggtacaaactaagtaggcagtaagtag
gtgctgtgtagatggatgggtcactagaaacaaatagtccagactagaga
cacaccttgttaaatgaagtagtccagatatttgcctttattagactatg
atgaggtaattgtacttatgagactatgatgacatagctattgtgtctct
ctccctcctccctgccactacaaccccactcacatacaccaatgaagtga
catgcatttgacctatagaagttgtgacctattggaacttaaccgctatt
ggtaagttcaagtcattattgtaaactccataatacatatgttttttgtc
ataaatcaacaaaatatccacattgggatataacatatttacatggatct

gaattcacaatttcttctctccaaagtgatattttcatagcgtacatgat
tactgggggtcatgtgtttatgaaggggcagagggcagagcaggagaaga
agatgcagtcaagatgcctgatagttagtagtcaagactatttggtggcc
cacgtgaaattaggttcgtggtcttcgtctgctccataggtgacaggtgt
ccaatatgcaaaattattacagcaatcagtgctaattggccccctacatg
taaccagaaagtagagggaccaaaaattaaatgagtattaaaataattca
cctcctacctgcagaaatgctatctctagacaggggtagaaacctccaca
gagcccatttaggaagctgagggaaattttcaatggcgcccaaccttgga
aggaattatttgtacaaattagagtccttcaccagtgctactgcaaattt
aattaaaatctctcagcatatagattattaactgacaggacatctattta
tttgtctggttgttggttggttttgttttctcagaacagggtttctctga
attcctttgtagaccaggctggcctcgaactcacaaggatccaccagcct
ctgcttcccaagtggtgcgattaaaggcatgcgccaccacgcctgggtag
catgcccatttttaatgagatgagcagcaaattaaatttatctgacagca
aagccaccatggccagaatgggatcctatcttctagacaattgctggtgc
actttggcaatgcctttccaactgcagaaacacagacaaaattgactcac
ttctcactgttgtggtggctttatatttatcgagtagccacaacttagca
gattacctttgagagtgtggtttgtttgcttgtttgtttttttaaacaat
tgtctgaacacgtcgccctggtatagcagtggcagaagtcagctttgaca
cttggcaggcaggcaggcagccggagacaagtgtggctgactttctctgt
gcgtctactggacattctgcctgcactgcctttggtgataggagagcggg
gaaagatctgcttcagcagacatctgagaagcacagcttcagctgctgcc
agctcactttaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49646094_49647138
seq2: B6Ng01-080O08.b_34_1083

seq1  GAATTCACGTAAGGCACTGTATGTATCTTTCTTTGTCTCAGAAAACTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGTAAGGCACTGTATGTATCTTTCTTTGTCTCAGAAAACTAAG  50

seq1  AGCTACTTATTTGTGAGAAATGGCGATGGAGTGTCATCAGAGGGTTTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTTATTTGTGAGAAATGGCGATGGAGTGTCATCAGAGGGTTTGTC  100

seq1  TGTTCTGGTACCAGACCCAGGTGCCAGTCGGTTCCTTCCTCCATGTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGGTACCAGACCCAGGTGCCAGTCGGTTCCTTCCTCCATGTACTG  150

seq1  AACACAACACGGAAGTCATATAAATTTTGACATTTACCTTTTAAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACACGGAAGTCATATAAATTTTGACATTTACCTTTTAAATTTTA  200

seq1  TAATGTCAAAAAAAATTTTCCACACGATCAGCAGTATCAATCATTTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCAAAAAAAATTTTCCACACGATCAGCAGTATCAATCATTTCTGC  250

seq1  ATCTACTTCGGAAAACACATGTAGATAATCAGCAACGTGTTGGCTTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTCGGAAAACACATGTAGATAATCAGCAACGTGTTGGCTTGTGG  300

seq1  TATTTTCATGAATCGGGTACATGAAATATGTTTTTAATGAGTTCTCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCATGAATCGGGTACATGAAATATGTTTTTAATGAGTTCTCTTGA  350

seq1  ATTGTGAACATAAAGTATGTGTAGATTTCTTTTTATACTTCACTTTGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAACATAAAGTATGTGTAGATTTCTTTTTATACTTCACTTTGCTA  400

seq1  AATGCTTGGCAAGGCTGCTTTTCACCCGGCCAATCACAGCTTGGTCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTGGCAAGGCTGCTTTTCACCCGGCCAATCACAGCTTGGTCATAA  450

seq1  TGTGACATAAAGGAATTTCCTGATTGGCCAGGACCAGCTGAAGGGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATAAAGGAATTTCCTGATTGGCCAGGACCAGCTGAAGGGTCTGG  500

seq1  CTGTGTGCCCCCATTGAGTTGAGCGAATATCTTTTTCTATCCATCTTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCCCCCATTGAGTTGAGCGAATATCTTTTTCTATCCATCTTCAC  550

seq1  ACCATATTCTGCTGCCTGTCTTCTTGCCCCTAACTCCTTTCTGACCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATTCTGCTGCCTGTCTTCTTGCCCCTAACTCCTTTCTGACCATAA  600

seq1  ACATTTCACGGAGACAGAGACTGTTGGGTAAGGGAAATGGCAACTGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCACGGAGACAGAGACTGTTGGGTAAGGGAAATGGCAACTGCATG  650

seq1  ATTCCTCTGCAGACTCCGCAACAGGTACAAACTAAGTAGGCAGTAAGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCTGCAGACTCCGCAACAGGTACAAACTAAGTAGGCAGTAAGTAG  700

seq1  GTGCTGTGTAGATGGATGGGTCACTAGAAACAAATAGTCCAGACTAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGTAGATGGATGGGTCACTAGAAACAAATAGTCCAGACTAGAGA  750

seq1  CACACCTTGTTAAATGAAGTAGTCCAGATATTTGCCTTTATTAGACTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTGTTAAATGAAGTAGTCCAGATATTTGCCTTTATTAGACTATG  800

seq1  ATGAGGTAATTGTACTTATGAGACTATGATGACATAGCTATTGTGTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTAATTGTACTTATGAGACTATGATGACATAGCTATTGTGTCTCT  850

seq1  CTCCCTCCTCCCTGCCACTACAACCCCACTCACATACACCAATGAGGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTCCCTCCTCCCTGCCACTACAACCCCACTCACATACACCAATGAAGTGA  900

seq1  CATGCATTTTGACAATAGAAGTTGTGACCTAATGGAACTT-ACCGCTATT  949
      |||||||||   | ||||||||||||||||| |||||||| |||||||||
seq2  CATGCATTTGACCTATAGAAGTTGTGACCTATTGGAACTTAACCGCTATT  950

seq1  GGT-AGTTCAAGTCATTATTGTAAACTCCATAATACATATG-TTTTTGTC  997
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGTAAGTTCAAGTCATTATTGTAAACTCCATAATACATATGTTTTTTGTC  1000

seq1  ATAAAATCACAAGATTACCACATT-GGATATAAACATA-TTACAT-GATC  1044
      |||||   |||| ||  ||||||| |||||| |||||| |||||| ||||
seq2  ATAAATCAACAAAATATCCACATTGGGATAT-AACATATTTACATGGATC  1049

seq1  T  1045
      |
seq2  T  1050

seq1: chr8_49776068_49777196
seq2: B6Ng01-080O08.g_70_1182 (reverse)

seq1  GTTAAAGTGGAGCTGGGCAGCAGCTGAAGCTGGTGCCTTCTCAGATGTCT  50
      |||||||| ||||| |||||||||||||||| ||| ||||||||||||||
seq2  GTTAAAGT-GAGCT-GGCAGCAGCTGAAGCT-GTG-CTTCTCAGATGTCT  46

seq1  GCTGAAGCAGGATTCTTTCACCGCTCTTCCTGACCACAAAAGGGCAGTGC  100
      ||||||||||   |||||| |||||| |||| | ||| ||| ||||||||
seq2  GCTGAAGCAG--ATCTTTCCCCGCTC-TCCT-ATCACCAAA-GGCAGTGC  91

seq1  AGGCAAGAGTGTTCCAGTAGACGCACAGAGAAAGTCAG-CACACTTGGTT  149
      |||| ||| || |||||||||||||||||||||||||| ||||||||  |
seq2  AGGC-AGAATG-TCCAGTAGACGCACAGAGAAAGTCAGCCACACTTG--T  137

seq1  CTCCGGCTGCCTGCCTGCCTGCCAAGTGTCAAAGCTGGACTTCTGCCACT  199
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTCCGGCTGCCTGCCTGCCTGCCAAGTGTCAAAGCT-GACTTCTGCCACT  186

seq1  GCTTAATACCAGGGCGACGTGTTCAGACAATTGTTTTAAAAAAAACAAAC  249
      |||  |||||||||||||||||||||||||||||||  ||||||||||||
seq2  GCT--ATACCAGGGCGACGTGTTCAGACAATTGTTT--AAAAAAACAAAC  232

seq1  AAGCAAACAAACCACACTCTC-AAGGTAATCTGCTAAGTTGTGGCTACTC  298
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGCAAACAAACCACACTCTCAAAGGTAATCTGCTAAGTTGTGGCTACTC  282

seq1  GATAAATATAAAGCCACCACAACAGTGAGAAGTGAGTCAATTTTGTCTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATATAAAGCCACCACAACAGTGAGAAGTGAGTCAATTTTGTCTGT  332

seq1  GTTTCTGCAGTTGGAAAGGCATTGCCAAAGTGCACCAGCAATTGTCTAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCAGTTGGAAAGGCATTGCCAAAGTGCACCAGCAATTGTCTAGA  382

seq1  AGATAGGATCCCATTCTGGCCATGGTGGCTTTGCTGTCAGATAAATTTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGATCCCATTCTGGCCATGGTGGCTTTGCTGTCAGATAAATTTAA  432

seq1  TTTGCTGCTCATCTCATTAAAAATGGGCATGCTACCCAGGCGTGGTGGCG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGCTCATCTCATTAAAAATGGGCATGCTACCCAGGCGTGGTGGCG  482

seq1  CATGCCTTTAATCGCACCACTTGGGAAGCAGAGGCTGGTGGATCCTTGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTTAATCGCACCACTTGGGAAGCAGAGGCTGGTGGATCCTTGTG  532

seq1  AGTTCGAGGCCAGCCTGGTCTACAAAGGAATTCAGAGAAACCCTGTTCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGAGGCCAGCCTGGTCTACAAAGGAATTCAGAGAAACCCTGTTCTG  582

seq1  AGAAAACAAAACCAACCAACAACCAGACAAATAAATAGATGTCCTGTCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAAAACCAACCAACAACCAGACAAATAAATAGATGTCCTGTCAG  632

seq1  TTAATAATCTATATGCTGAGAGATTTTAATTAAATTTGCAGTAGCACTGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATCTATATGCTGAGAGATTTTAATTAAATTTGCAGTAGCACTGG  682

seq1  TGAAGGACTCTAATTTGTACAAATAATTCCTTCCAAGGTTGGGCGCCATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGACTCTAATTTGTACAAATAATTCCTTCCAAGGTTGGGCGCCATT  732

seq1  GAAAATTTCCCTCAGCTTCCTAAATGGGCTCTGTGGAGGTTTCTACCCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTCCCTCAGCTTCCTAAATGGGCTCTGTGGAGGTTTCTACCCCT  782

seq1  GTCTAGAGATAGCATTTCTGCAGGTAGGAGGTGAATTATTTTAATACTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGAGATAGCATTTCTGCAGGTAGGAGGTGAATTATTTTAATACTCA  832

seq1  TTTAATTTTTGGTCCCTCTACTTTCTGGTTACATGTAGGGGGCCAATTAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTTGGTCCCTCTACTTTCTGGTTACATGTAGGGGGCCAATTAG  882

seq1  CACTGATTGCTGTAATAATTTTGCATATTGGACACCTGTCACCTATGGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATTGCTGTAATAATTTTGCATATTGGACACCTGTCACCTATGGAG  932

seq1  CAGACGAAGACCACGAACCTAATTTCACGTGGGCCACCAAATAGTCTTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACGAAGACCACGAACCTAATTTCACGTGGGCCACCAAATAGTCTTGA  982

seq1  CTACTAACTATCAGGCATCTTGACTGCATCTTCTTCTCCTGCTCTGCCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAACTATCAGGCATCTTGACTGCATCTTCTTCTCCTGCTCTGCCCT  1032

seq1  CTGCCCCTTCATAAACACATGACCCCCAGTAATCATGTACGCTATGAAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTTCATAAACACATGACCCCCAGTAATCATGTACGCTATGAAAA  1082

seq1  TATCACTTTGGAGAGAAGAAATTGTGAATTC  1129
      |||||||||||||||||||||||||||||||
seq2  TATCACTTTGGAGAGAAGAAATTGTGAATTC  1113