BAC Information

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BAC

Clone NameB6Ng01-080O10
Chromosome8 (Build37)
Map Location 25,975,048 - 26,075,707
singlet/doubletdoublet
Overlap geneAdam32, Adam9
Upstream geneZmat4, 1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5
Downstream geneTm2d2, Htra4, Plekha2, LOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1, Bag4, Lsm1, Star, Ash2l, Kcnu1, Hgsnat
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080O10.bB6Ng01-080O10.g
ACCDH895910DH895911
length1,0581,118
definitionDH895910|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O10, 5' end.DH895911|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,074,659 - 26,075,707)(25,975,048 - 25,976,182)
sequence
gaattctgtataagggtaacactagctttgcagaatgatgctcgacgctt
tccttcccgttgtagtgcatggagaaatgtgaggaaacagattaaataga
aaaatgctaatgtgagccgtgtataatcacctggtgtgttctgtgtggag
aagttgacagctaatgtaactgcccatcactgtcaatcctgtctttccag
caaagagcacagcactgagggacgggcttctggtcttcttcttcctaatc
gtcccccttgttgcggctgccattttcctctttatcaagagagatgaact
acggaaaaccttcaggaagaagagatcacaaatgtatgagtgcttagttt
tttcttcttaatgtgtactaagtaatttagaataatttaagtaatttaaa
gtaattattaatgatctagcatagaagttggcaatcttaaaaatagggtt
ctacgatatcttactgttcttctgatgtgatggcatgtagtggtgaatca
gccatgatggcgtaggcttgtgtaacgcacttggaaggctgaggcaggag
gattgtgaattccaggcttgtctggactatctattggacaacctactgag
accttattacttatttacttacacacacacacacacacacacacacaaag
aaagactggtggcttagctctcagaccaggcagggaagggtgtgagcagc
ctatactgtaagcagtggtccttggggctccttttgccttacactgattt
ttttttatataatatatctcttgaatttattcttttttaaattaatcatt
ccatttgtttatatctcatgatattccacttcccggttacccctccacca
acacttccatcccacatccaccatcctccctccccttggcctgtattctt
gatagatgcaaatgggctttagggcttggcatttgacttaaggttttcta
actagggaaaacatggataaagatagacatgtgtgggaaatttccatgtc
tctttatggatccattctacataggagtttgactctcagtttgaacagat
tagaaata
gaattccatagagggaatatctggtttcttaggctaaaactcacacatca
aaggaagacatgtttaaaaactgcgaagagagacttatatttgtatgaag
aaactgtagtgaattcaaatgtttgcccttaaatttagagagcagtttca
ggcacatagatcatctctaaacctggcagtgtgttgcaggcagtaggcca
gatgtcagcatctgtcttttcccttgtctaggttctgtagactgtcggct
gtttcagccatcagcctttacaaggaaagacctggaccttccccaggctg
attgtgaatcatttactagcaattggatgcttttcctgttactcagctta
atgccatcttaactggatctaaatcgaaacaaaaaaaaaaaaaaaaacct
cagcaacttccatgagaataaattttctaaatgcaaagaaattgagattt
gggggcagggagccaaatgaaaattattggcaatgaaaaaaaatcacagt
gagaagcaccatcaacagactagttcacacagaaagtcctcacatcatcg
tcccgagttcatcactcagataaacaataattcaaacatgatccatcgtg
gccttacttttgaggactctggtgtgaacatcaggggctagaaggacctg
atgctgtaatctttagttgaaagcccattcaactaaattacagcagagca
ttagccatatatagagagaagtagtgtgcaaaaggacatttagagccaca
gacaggcatcactacaaagtctcctccatgggactttagagatgcactgc
tgggaaggatgcagaagaacctttaaagccaaagccaggtgtggaggcac
aagcctagaaccccagcactcacacggctaaagcagaaaagacactggtt
cttaggcaggcttgggctccaaagtaggtacttgtctcaaacgtgacagc
aaatactctttaatatcacatgacacaggctggctgatagattactaata
acaaacaacaacaaacgatgactattctcttgaggtgaggtgggacagca
cctgcctgatggacaccagttgtagaaatgaagtgtaagatggtgtattg
aatgttaatctgagtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_26074659_26075707
seq2: B6Ng01-080O10.b_46_1087 (reverse)

seq1  AAACTGAGAGTTCAAACTTCCTATGTAAGAATGGATCCATTAAAGGAAGA  50
      |||||||||| |||||| |||||||| |||||||||||| |||||  |||
seq2  AAACTGAGAG-TCAAAC-TCCTATGT-AGAATGGATCCA-TAAAG--AGA  44

seq1  CATGGAAATTTCCCAACACATGTCTTATCTTTATCCCATGTTTTCCCTAG  100
      |||||||||||||| ||||||||| ||||||||| |||||||||||||||
seq2  CATGGAAATTTCCC-ACACATGTC-TATCTTTAT-CCATGTTTTCCCTAG  91

seq1  TTAGAAAACC-TAAGTCAAATGCCAAGCCCTAAAGCCCATTTGCATCTAT  149
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAACCTTAAGTCAAATGCCAAGCCCTAAAGCCCATTTGCATCTAT  141

seq1  CAAGAATACAGGCCAAGGGGAGGGAGGATGGTGGATGTGGGATGGAAGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATACAGGCCAAGGGGAGGGAGGATGGTGGATGTGGGATGGAAGTG  191

seq1  TTGGTGGAGGGGTAACCGGGAAGTGGAATATCATGAGATATAAACAAATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGAGGGGTAACCGGGAAGTGGAATATCATGAGATATAAACAAATG  241

seq1  GAATGATTAATTTAAAAAAGAATAAATTCAAGAGATATATTATAT-AAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAATGATTAATTTAAAAAAGAATAAATTCAAGAGATATATTATATAAAAA  291

seq1  AAAATCAGTGTAAGGCAAAAGGAGCCCCAAGGACCACTGCTTACAGTATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGTGTAAGGCAAAAGGAGCCCCAAGGACCACTGCTTACAGTATA  341

seq1  GGCTGCTCACACCCTTCCCTGCCTGGTCTGAGAGCTAAGCCACCAGTCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTCACACCCTTCCCTGCCTGGTCTGAGAGCTAAGCCACCAGTCTT  391

seq1  TCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGTAAATAAGTAATAAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGTAAATAAGTAATAAGG  441

seq1  TCTCAGTAGGTTGTCCAATAGATAGTCCAGACAAGCCTGGAATTCACAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTAGGTTGTCCAATAGATAGTCCAGACAAGCCTGGAATTCACAAT  491

seq1  CCTCCTGCCTCAGCCTTCCAAGTGCGTTACACAAGCCTACGCCATCATGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCCTCAGCCTTCCAAGTGCGTTACACAAGCCTACGCCATCATGG  541

seq1  CTGATTCACCACTACATGCCATCACATCAGAAGAACAGTAAGATATCGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCACCACTACATGCCATCACATCAGAAGAACAGTAAGATATCGTA  591

seq1  GAACCCTATTTTTAAGATTGCCAACTTCTATGCTAGATCATTAATAATTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTATTTTTAAGATTGCCAACTTCTATGCTAGATCATTAATAATTA  641

seq1  CTTTAAATTACTTAAATTATTCTAAATTACTTAGTACACATTAAGAAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAATTACTTAAATTATTCTAAATTACTTAGTACACATTAAGAAGAA  691

seq1  AAAACTAAGCACTCATACATTTGTGATCTCTTCTTCCTGAAGGTTTTCCG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAGCACTCATACATTTGTGATCTCTTCTTCCTGAAGGTTTTCCG  741

seq1  TAGTTCATCTCTCTTGATAAAGAGGAAAATGGCAGCCGCAACAAGGGGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATCTCTCTTGATAAAGAGGAAAATGGCAGCCGCAACAAGGGGGA  791

seq1  CGATTAGGAAGAAGAAGACCAGAAGCCCGTCCCTCAGTGCTGTGCTCTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTAGGAAGAAGAAGACCAGAAGCCCGTCCCTCAGTGCTGTGCTCTTT  841

seq1  GCTGGAAAGACAGGATTGACAGTGATGGGCAGTTACATTAGCTGTCAACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAAGACAGGATTGACAGTGATGGGCAGTTACATTAGCTGTCAACT  891

seq1  TCTCCACACAGAACACACCAGGTGATTATACACGGCTCACATTAGCATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACACAGAACACACCAGGTGATTATACACGGCTCACATTAGCATTT  941

seq1  TTCTATTTAATCTGTTTCCTCACATTTCTCCATGCACTACAACGGGAAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTAATCTGTTTCCTCACATTTCTCCATGCACTACAACGGGAAGG  991

seq1  AAAGCGTCGAGCATCATTCTGCAAAGCTAGTGTTACCCTTATACAGAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGTCGAGCATCATTCTGCAAAGCTAGTGTTACCCTTATACAGAATT  1041

seq1  C  1049
      |
seq2  C  1042

seq1: chr8_25975048_25976182
seq2: B6Ng01-080O10.g_69_1186

seq1  GAATTCCATAGAGGGAATATCTGGTTTCTTAGGCTAAAACTCACACATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGAGGGAATATCTGGTTTCTTAGGCTAAAACTCACACATCA  50

seq1  AAGGAAGACATGTTTAAAAACTGCGAAGAGAGACTTATATTTGTATGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGACATGTTTAAAAACTGCGAAGAGAGACTTATATTTGTATGAAG  100

seq1  AAACTGTAGTGAATTCAAATGTTTGCCCTTAAATTTAGAGAGCAGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTAGTGAATTCAAATGTTTGCCCTTAAATTTAGAGAGCAGTTTCA  150

seq1  GGCACATAGATCATCTCTAAACCTGGCAGTGTGTTGCAGGCAGTAGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATAGATCATCTCTAAACCTGGCAGTGTGTTGCAGGCAGTAGGCCA  200

seq1  GATGTCAGCATCTGTCTTTTCCCTTGTCTAGGTTCTGTAGACTGTCGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAGCATCTGTCTTTTCCCTTGTCTAGGTTCTGTAGACTGTCGGCT  250

seq1  GTTTCAGCCATCAGCCTTTACAAGGAAAGACCTGGACCTTCCCCAGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGCCATCAGCCTTTACAAGGAAAGACCTGGACCTTCCCCAGGCTG  300

seq1  ATTGTGAATCATTTACTAGCAATTGGATGCTTTTCCTGTTACTCAGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAATCATTTACTAGCAATTGGATGCTTTTCCTGTTACTCAGCTTA  350

seq1  ATGCCATCTTAACTGGATCTAAATCGAAACAAAAAAAAAAAAAAAAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATCTTAACTGGATCTAAATCGAAACAAAAAAAAAAAAAAAAACCT  400

seq1  CAGCAACTTCCATGAGAATAAATTTTCTAAATGCAAAGAAATTGAGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACTTCCATGAGAATAAATTTTCTAAATGCAAAGAAATTGAGATTT  450

seq1  GGGGGCAGGGAGCCAAATGAAAATTATTGGCAATGAAAAAAAATCACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCAGGGAGCCAAATGAAAATTATTGGCAATGAAAAAAAATCACAGT  500

seq1  GAGAAGCACCATCAACAGACTAGTTCACACAGAAAGTCCTCACATCATCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCACCATCAACAGACTAGTTCACACAGAAAGTCCTCACATCATCG  550

seq1  TCCCGAGTTCATCACTCAGATAAACAATAATTCAAACATGATCCATCGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAGTTCATCACTCAGATAAACAATAATTCAAACATGATCCATCGTG  600

seq1  GCCTTACTTTTGAGGACTCTGGTGTGAACATCAGGGGCTAGAAGGACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACTTTTGAGGACTCTGGTGTGAACATCAGGGGCTAGAAGGACCTG  650

seq1  ATGCTGTAATCTTTAGTTGAAAGCCCATTCAACTAAATTACAGCAGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTAATCTTTAGTTGAAAGCCCATTCAACTAAATTACAGCAGAGCA  700

seq1  TTAGCCATATATAGAGAGAAGTAGTGTGCAAAAGGACATTTAGAGCCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCATATATAGAGAGAAGTAGTGTGCAAAAGGACATTTAGAGCCACA  750

seq1  GACAGGCATCACTACAAAGTCTCCTCCATGGGACTTTAGAGATGCACTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCATCACTACAAAGTCTCCTCCATGGGACTTTAGAGATGCACTGC  800

seq1  TGGGAAGGATGCAGAAGAACCCTTAAAGCCAAAGCCAGGTGTGGAGGCAC  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGGGAAGGATGCAGAAGAACCTTTAAAGCCAAAGCCAGGTGTGGAGGCAC  850

seq1  AAGCCTAGAACCCCAGCACTCACACGGCTAAGGCAGAAAAGACACTGGTT  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGCCTAGAACCCCAGCACTCACACGGCTAAAGCAGAAAAGACACTGGTT  900

seq1  CTTAGGCAGGCTTGGGCTCCAAAGTAGGTACTTGTCTCAAAACGTGACAA  950
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  CTTAGGCAGGCTTGGGCTCCAAAGTAGGTACTTGTCTC-AAACGTGAC-A  948

seq1  GCAAATACTCTTTAATATCACATGACACAGGCTGGCTGATTAGATTTACT  1000
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  GCAAATACTCTTTAATATCACATGACACAGGCTGGCTGA-TAGA-TTACT  996

seq1  AATAAACAAACAAACAAACAAACAGATGACTATTCTC-TGAGGTGAGGGT  1049
      ||| |||||||||   ||||||| ||||||||||||| |||||||| |||
seq2  AAT-AACAAACAA--CAACAAAC-GATGACTATTCTCTTGAGGTGA-GGT  1041

seq1  GGGACAGCACCTGCCCTGATGAGCACACAGGTTTGTAGAAAGGGAAGCGT  1099
      ||||||||||||| |||||||  ||| |||  |||||||||  |||| ||
seq2  GGGACAGCACCTG-CCTGATGGACAC-CAG--TTGTAGAAA-TGAAGTGT  1086

seq1  GAAGATGGTGTAGTGAGATGTTAAATCTTGAGTGTG  1135
       ||||||||||| ||| ||||| |||| ||||||||
seq2  -AAGATGGTGTATTGA-ATGTT-AATC-TGAGTGTG  1118