BAC Information

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BAC

Clone NameB6Ng01-081F21
Chromosome6 (Build37)8 (Build37)
Map Location 18,835,451 - 18,835,96868,192,957 - 68,193,956
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081F21.bB6Ng01-081F21.g
ACCDH896244DH896245
length9651,001
definitionDH896244|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F21, 5' end.DH896245|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,451 - 18,835,968)(68,192,957 - 68,193,956)
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgctggtggtctt
tttgtcttattgacggtgtcctttgacttgcagaaactttggagtttcat
taggtcccatttgtcaattcttgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctgtttttttgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggattgattcgca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctggtcttcaattctattccattggtc
tacttgtctgtctctataccagtaccatgcagtttttatcacaattgctc
tgtagtaaagctttaggtcaggcatggtgattcgaccagaggttctttta
tccttgagaagagtttttgctatcctaggttttttgttattccagatgaa
tttgcaaattgctccttctaattcgttgaagaattgagttggaattttga
tggggattgcatttaatctgtagattgcttttggcaagagagccattttt
acaatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttcttaatttctttcttcagagacttgaagtttttatcatacag
atctttcacttccttagtagagtcacgccgagatattttatattatttgc
gactatgagaggtgt
gaattctatttactagtgatttacttaaaatctgcatgaaaataattaaa
attgatctttttttgtttgaaatttgttaggctttgggatgaaagttctg
cttgttctcttcttaaaattagaataatttacaatgtgcttttatcttgt
tgaatattttacagtgcagtgagaatattcattatttaaagctaaggtac
agaataaattttctcagagtctgtttagtcgtctttggaaaatagatctt
tgatcatctttccaaaatatacattaataataaatatatcccttgttttc
tgattgttagcttctaaagatcttttcttcatgtgatttaatattttatt
gcagactgttcttcattgttcttgtgtagtatatatctccacagtttcag
tggtaaccttatcttttgtaactggttgtctttcagtcttagccttataa
gcctcttcctctctaactcagggtttatttgctttgctgaaaccttcaga
gatgtttcaatctttaaacatgtttattctctatagctttaaatatttta
tgctttgatttatattaatttcatcttctaacacttttagtaatttctgt
ttatatcagcgatttccttctgagacttgtgtttttaccagactgccatc
ttttagaacaatggacagacatgcttgtgtttacctaactgcagctcttg
tttcatgcagtttcaggtgacatttttgtctttgcacttggttctctaaa
tctgcatgtttcctatatgcagacccaaccaacctttattccaaatattt
gaagaatgtttgttgtgtgcatgaacagcgttctcatctctagtggttcc
tggttattagtgtttgtttttggactcatctcccattcatgctattgata
tgtaatctctgttggaaaagtctggacatttttttattatttttcgaaag
gacatatttatatatattagacattttaaaacattcttaaggatgaataa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835451_18835968
seq2: B6Ng01-081F21.b_45_562 (reverse)

seq1  AACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAT  50

seq1  CCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGT  100

seq1  TGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACT  150
      ||||||| |||||||||||| ||||| |||||||||||||||| ||||||
seq2  TGTTATCATGTAGAAGAATGCGAATCAATCCATACTTATCTCCTTGTACT  150

seq1  AAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACT  200
      |||||||||||||||||||||||||||||||||| |||| ||||||||||
seq2  AAGGTCAAATCTAAGTGGATCAAGGAACTTCACAAAAAAACAGAGACACT  200

seq1  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAG  250

seq1  GGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGA  299
      ||||||| ||||||||||||||||||||||| |||||||| || |  |||
seq2  GGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCAAGA  300

seq1  ATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGA  349
      || ||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  ATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGTCAAAGGA  350

seq1  CACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTA  399
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CACCGTCAATAAGACAAAAAGACCACCAGCAGATTGGGAAAGGATCTTTA  400

seq1  CCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTC  449
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTATCCTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACTC  450

seq1  AAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTC  499
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAA-AAATGGGGCTC  499

seq1  AGAACTGAACAAAGAATTC  518
      |||||||||||||||||||
seq2  AGAACTGAACAAAGAATTC  518

seq1: chr8_68192957_68193956
seq2: B6Ng01-081F21.g_68_1068

seq1  GAATTCTATTTACTAGTGATTTACTTAAAATCTGCATGAAAATAATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTACTAGTGATTTACTTAAAATCTGCATGAAAATAATTAAA  50

seq1  ATTGATCTTTTTTTGTTTGAAATTTGTTAGGCTTTGGGATGAAAGTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCTTTTTTTGTTTGAAATTTGTTAGGCTTTGGGATGAAAGTTCTG  100

seq1  CTTGTTCTCTTCTTAAAATTAGAATAATTTACAATGTGCTTTTATCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTCTTCTTAAAATTAGAATAATTTACAATGTGCTTTTATCTTGT  150

seq1  TGAATATTTTACAGTGCAGTGAGAATATTCATTATTTAAAGCTAAGGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTTTACAGTGCAGTGAGAATATTCATTATTTAAAGCTAAGGTAC  200

seq1  AGAATAAATTTTCTCAGAGTCTGTTTAGTCGTCTTTGGAAAATAGATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAATTTTCTCAGAGTCTGTTTAGTCGTCTTTGGAAAATAGATCTT  250

seq1  TGATCATCTTTCCAAAATATACATTAATAATAAATATATCCCTTGTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATCTTTCCAAAATATACATTAATAATAAATATATCCCTTGTTTTC  300

seq1  TGATTGTTAGCTTCTAAAGATCTTTTCTTCATGTGATTTAATATTTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTTAGCTTCTAAAGATCTTTTCTTCATGTGATTTAATATTTTATT  350

seq1  GCAGACTGTTCTTCATTGTTCTTGTGTAGTATATATCTCCACAGTTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTGTTCTTCATTGTTCTTGTGTAGTATATATCTCCACAGTTTCAG  400

seq1  TGGTAACCTTATCTTTTGTAACTGGTTGTCTTTCAGTCTTAGCCTTATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACCTTATCTTTTGTAACTGGTTGTCTTTCAGTCTTAGCCTTATAA  450

seq1  GCCTCTTCCTCTCTAACTCAGGGTTTATTTGCTTTGCTGAAACCTTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTCCTCTCTAACTCAGGGTTTATTTGCTTTGCTGAAACCTTCAGA  500

seq1  GATGTTTCAATCTTTAAACATGTTTATTCTCTATAGCTTTAAATATTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTCAATCTTTAAACATGTTTATTCTCTATAGCTTTAAATATTTTA  550

seq1  TGCTTTGATTTATATTAATTTCATCTTCTAACACTTTTAGTAATTTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGATTTATATTAATTTCATCTTCTAACACTTTTAGTAATTTCTGT  600

seq1  TTATATCAGCGATTTCCTTCTGAGACTTGTGTTTTTACCAGACTGCCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCAGCGATTTCCTTCTGAGACTTGTGTTTTTACCAGACTGCCATC  650

seq1  TTTTAGAACAATGGACAGACATGCTTGTGTTTACCTAACTGCAGCTCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAACAATGGACAGACATGCTTGTGTTTACCTAACTGCAGCTCTTG  700

seq1  TTTCATGCAGTTTCAGGTGACATTTTTGTCTTTGCACTTGGTTCTCTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCAGTTTCAGGTGACATTTTTGTCTTTGCACTTGGTTCTCTAAA  750

seq1  TCTGCATGTTTCCTATATGCAGACCCAACCAACCTTTATTCCAAATATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATGTTTCCTATATGCAGACCCAACCAACCTTTATTCCAAATATTT  800

seq1  GAAGAATGTTTGTTGTGTGCATGAACAGCGTTCTCATCTCTAGTGGTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGTTTGTTGTGTGCATGAACAGCGTTCTCATCTCTAGTGGTTCC  850

seq1  TGGTTATTAGTGTTTGTTTTTGGACTCATCTCCCATTCATGCTATTGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGTTATTAGTGTTTGTTTTTGGACTCATCTCCCATTCATGCTATTG-AT  899

seq1  ATGTAATCTCTGTTGGAAAAGTCTGGACA-TTTTTTATTA-TTTTCGAAA  948
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  ATGTAATCTCTGTTGGAAAAGTCTGGACATTTTTTTATTATTTTTCGAAA  949

seq1  GGACATATTTATATCATATTAGACATTTT-AAACA-TCTTAAAGATGATA  996
      |||||||||||||| |||||||||||||| ||||| |||||| ||||| |
seq2  GGACATATTTATAT-ATATTAGACATTTTAAAACATTCTTAAGGATGA-A  997

seq1  TAAA  1000
      ||||
seq2  TAAA  1001