BAC Information

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BAC

Clone NameB6Ng01-082C08
Chromosome8 (Build37)
Map Location 62,610,049 - 62,611,169
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC436042
Downstream geneAadat, Mfap3l, LOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082C08.bB6Ng01-082C08.g
ACCDH896790DH896791
length1,2341,118
definitionDH896790|Mus musculus domesticus DNA, BAC clone: B6Ng01-082C08, 5' end.DH896791|Mus musculus domesticus DNA, BAC clone: B6Ng01-082C08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaagtggtttttatcagtttgcaatcccccaggcaatgaaata
gtgttcctctttctccacatcctggccagcatttgctgtcacctgagttt
tttaacttagccattctgattggtgtgagtgagccattcaagattcctca
gttgagaattctttgtttagctctgtaccccatttttaattgagttattt
ggttttctagagtctaactttttgagtttcttatgtattctttatattag
ctgtctatgggatatagggttggtaaaaatcttcccaatttgtaggttgc
cattttgtcctcctgacagtgtcctttgctttattctggggaaatcaaca
tccttgacctcaagctttactacacagcaataatgataaaaacaaaacaa
aactgcatggtattggtacagagaaaaacaggtagatcaatggaatacaa
ctgaagacccagaaataaacccacacacctatggccacttgatctttgac
taagaagccaaaacaatacagtggaaaaaagacagcattttcaacaaata
gtgctggtataactggcattctgcatgtagaataatgcaaattgatccat
tttatctccttgtacaaagctcaagtccaaatggatcaaggacctccagt
taaaattagatacactgaatctaatagaagagaaagtgggaaagagcctc
gaccacattaatacagaggaaattttcctggacgccaatgactcacgctc
ttggatcatcaattgacaaaagagacctcatgaaactaaagtttactttt
atcaagagcattttgatgaaaaggagcaagtttagaaaggaaatatacag
aatgtatgattaaagtaattaatggagaccaggaagtgaaacagactgag
tcctgtgttcaagagacaaacatattaaggagtggtgatctggggcagac
ccactaacttactgtttatactttgcagctgacagaaatagttatgtcat
gataatagtatgtcatgtaatagtattattgtttagttatgtttcattga
ctttatctgaataactacatcagaaatgattacacgactttgtaaattat
tatttttactattcattaatgcactcatacaccctcggttaccccttgca
tattctaggcttacctcgctttctctctcaatgtcatgaccttgttcaac
tctcaccgtagggacgacagatgaggcctgacgt
gaattcctcgatgaaaggactacacttatttgtctgtggttagaaagaag
tagcttaagatggtagggagaaattatgctgagtcagtgaagctaagata
tgatttggatgataacaagtagaaaggggtgcacttggggatgggtagat
agcttagggggttaaccatacttactgtgtgaacaggagaacccaagatt
tggtttccagaccatgtgtaaaaatcaagagtggctgtaggcaacattta
accaatgtgccgggcagggagggatgtatcactacagcttgttgacaagg
taatccagtcaaaattaaacagaaaactaagttcatggcatgtaagatac
cctatctcaaggggattaaaaagatagaggagaaaggatcagagaaaaag
ggcaaaaagaagaaggagcaggataaaagtgaggccaaagaggagaaaga
ggaagagaacagaaaacactcaaaacacagaaggaacatcttcattactc
cttcttcctcagtcatgcctgtctctccactgtgtgcctctctgtgcttt
attctcttccttccacttttcttattcagagcaaacatgattcatgatcc
tgtgggttcatagtaactcaggaggcagaagggtaagttcacgagacact
gaacctggctttcctggttctagttttagggataacactcggtctatcat
ctttctgtggtcctaggatgtgctctttagacatttctttgttgtgatat
aatatctgaggaaatattcagcatggattttcaagggccttactaagcca
tttctttcccctgaggatggaggttcctgagagttgtatagatagactag
atccatacttgagcttttgaaagtcatacttcataaatatcttatgcatg
aaatttctgcaaaagattagatttttctctgatcttttaagatttttttt
tttacttgtgtgtgcatgtatgtttgaatatggtagggaagaaaaagtac
tccagatctgtcaatctctatttagaggtctccccactggctggggtcat
cagtttgctaaaatagcttgataaatgaggcaatagaatccttgtgttgg
cctccagtctctaagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62610049_62611169
seq2: B6Ng01-082C08.g_69_1186 (reverse)

seq1  AAACTTAGA-ACTGGGGAGCCAACCACAGGATTCCTATGCCTCATTTATC  49
      ||||||||| ||||| | ||||||   |||||||   |||||||||||||
seq2  AAACTTAGAGACTGGAG-GCCAACACAAGGATTCTATTGCCTCATTTATC  49

seq1  -AGCTATGTTAGCAAAACTGATGACCCCAGGCCAGT-GAGAGACCCTCTA  97
       |||||| ||||| ||||||||||||||| |||||| | |||| ||||| 
seq2  AAGCTATTTTAGC-AAACTGATGACCCCA-GCCAGTGGGGAGA-CCTCT-  95

seq1  AAATAGAGATGGACAGATCTGGAGTACTTTGTCTTCCCTACCATATTCAA  147
      |||||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  AAATAGAGATTGACAGATCTGGAGTACTTTTTCTTCCCTACCATATTCAA  145

seq1  ACATACATGCACACACAAGTAAAAAAAAAAATCTTAAAAGATCAGAGAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATGCACACACAAGTAAAAAAAAAAATCTTAAAAGATCAGAGAAA  195

seq1  AATCTAATCTTTTTGCAGAAATTTCATGCATAAGATATTTATGAAGTATG  247
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAATC-TTTTGCAGAAATTTCATGCATAAGATATTTATGAAGTATG  244

seq1  ACTTTCAAAAGCTCAAGTATGGATCTAGTCTATCTATACAACTCTCAGGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAAAAGCTCAAGTATGGATCTAGTCTATCTATACAACTCTCAGGA  294

seq1  ACCTCCATCCTCAGGGGAAAGAAATGGCTTAGTAAGGCCCTTGAAAATCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATCCTCAGGGGAAAGAAATGGCTTAGTAAGGCCCTTGAAAATCC  344

seq1  ATGCTGAATATTTCCTCAGATATTATATCACAACAAAGAAATGTCTAAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAATATTTCCTCAGATATTATATCACAACAAAGAAATGTCTAAAG  394

seq1  AGCACATCCTAGGACCACAGAAAGATGATAGACCGAGTGTTATCCCTAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATCCTAGGACCACAGAAAGATGATAGACCGAGTGTTATCCCTAAA  444

seq1  ACTAGAACCAGGAAAGCCAGGTTCAGTGTCTCGTGAACTTACCCTTCTGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAACCAGGAAAGCCAGGTTCAGTGTCTCGTGAACTTACCCTTCTGC  494

seq1  CTCCTGAGTTACTATGAACCCACAGGATCATGAATCATGTTTGCTCTGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAGTTACTATGAACCCACAGGATCATGAATCATGTTTGCTCTGAA  544

seq1  TAAGAAAAGTGGAAGGAAGAGAATAAAGCACAGAGAGGCACACAGTGGAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAGTGGAAGGAAGAGAATAAAGCACAGAGAGGCACACAGTGGAG  594

seq1  AGACAGGCATGACTGAGGAAGAAGGAGTAATGAAGATGTTCCTTCTGTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGCATGACTGAGGAAGAAGGAGTAATGAAGATGTTCCTTCTGTGT  644

seq1  TTTGAGTGTTTTCTGTTCTCTTCCTCTTTCTCCTCTTTGGCCTCACTTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTGTTTTCTGTTCTCTTCCTCTTTCTCCTCTTTGGCCTCACTTTT  694

seq1  ATCCTGCTCCTTCTTCTTTTTGCCCTTTTTCTCTGATCCTTTCTCCTCTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCTCCTTCTTCTTTTTGCCCTTTTTCTCTGATCCTTTCTCCTCTA  744

seq1  TCTTTTTAATCCCCTTGAGATAGGGTATCTTACATGCCATGAACTTAGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTAATCCCCTTGAGATAGGGTATCTTACATGCCATGAACTTAGTT  794

seq1  TTCTGTTTAATTTTGACTGGATTACCTTGTCAACAAGCTGTAGTGATACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTAATTTTGACTGGATTACCTTGTCAACAAGCTGTAGTGATACA  844

seq1  TCCCTCCCTGCCCGGCACATTGGTTAAATGTTGCCTACAGCCACTCTTGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTGCCCGGCACATTGGTTAAATGTTGCCTACAGCCACTCTTGA  894

seq1  TTTTTACACATGGTCTGGAAACCAAATCTTGGGTTCTCCTGTTCACACAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACACATGGTCTGGAAACCAAATCTTGGGTTCTCCTGTTCACACAG  944

seq1  TAAGTATGGTTAACCCCCTAAGCTATCTACCCATCCCCAAGTGCACCCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATGGTTAACCCCCTAAGCTATCTACCCATCCCCAAGTGCACCCCT  994

seq1  TTCTACTTGTTATCATCCAAATCATATCTTAGCTTCACTGACTCAGCATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTGTTATCATCCAAATCATATCTTAGCTTCACTGACTCAGCATA  1044

seq1  ATTTCTCCCTACCATCTTAAGCTACTTCTTTCTAACCACAGACAAATAAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCCCTACCATCTTAAGCTACTTCTTTCTAACCACAGACAAATAAG  1094

seq1  TGTAGTCCTTTCATCGAGGAATTC  1121
      ||||||||||||||||||||||||
seq2  TGTAGTCCTTTCATCGAGGAATTC  1118