BAC Information

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BAC

Clone NameB6Ng01-082D13
Chromosome8 (Build37)
Map Location 34,252,486 - 34,253,147
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666589, EG546052, LOC100042715, LOC628408
Downstream geneEG628412, Wrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms, LOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082D13.g
ACCDH896842
length936
definitionDH896842|Mus musculus domesticus DNA, BAC clone: B6Ng01-082D13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttattctatt
ttctggagcccaccttcttgagttctttttatatattggatattagtccc
ctatctgatttgggatagattgggaaaggatctttacctttcccaggtgt
cttagttagggttttattgctgtgaagattctccatgaccatggcaactc
ttataaaggaaaccatttaactgtagctggcttacaggtttaaaggttta
gtccattgtcatcatggcccaaatcatggcggcatgtaggcagacatggt
gctggagaaggagctgagagttatcttgatctgaaggtagcaaaaggaga
tggtgagactatgagccatgctgggcatagctagagcatttgagctctca
aggccttcatccagcgtgacacacatcctccaacaaggccacacctccta
ataatgcccctccctaatggcctggtatttcaaacacttgagtatatgag
gaccattcttattcaaaccaccatagcacgtgatttgagggttgtgtcat
gttgacagttaaactataattccttggctggtgagatggctcatcgggta
agaacactgactgctcttcctcaggtcctgagttcaaatcccagcaacca
catggtggctcacaaccatctgaagtagatctgactccctcttctggagc
gtctgaacacagctactgtgtacttacatataataaattaattaatcttt
aaagaaaaaaaataacaggcttctctgcccatgattgtctctttaaaaat
gtggataaaaggagaccttatcaacaaacctcctctgaagcctaaaatca
gaccctaaagtggtaaacagaaattacacagactaaatgaaacagattta
agtggatcatcttctggagcagggatagttacattt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_34252486_34253147
seq2: B6Ng01-082D13.g_352_1006

seq1  GCATGTAGGCAGACATGGTGCTGGAGAAGGAGCTGAGAGTTATCTTGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTAGGCAGACATGGTGCTGGAGAAGGAGCTGAGAGTTATCTTGATC  50

seq1  TGAAGGTAGCAGAAGGAGATGGTGAGACTATGAGCCATACTGGGCATAGC  100
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  TGAAGGTAGCAAAAGGAGATGGTGAGACTATGAGCCATGCTGGGCATAGC  100

seq1  TAGAGCATTTGAGCTCTCAAAGCCTTCATCCACAGTGACACACATCCTCC  150
      |||||||||||||||||||| |||||||||||  ||||||||||||||||
seq2  TAGAGCATTTGAGCTCTCAAGGCCTTCATCCAGCGTGACACACATCCTCC  150

seq1  AACAAGGCCACACCTCCTAATAGTGCCACTCCCTAAGGGCCTAGTATTTC  200
      |||||||||||||||||||||| |||| |||||||| ||||| |||||||
seq2  AACAAGGCCACACCTCCTAATAATGCCCCTCCCTAATGGCCTGGTATTTC  200

seq1  AAACACTTGAGTATATGAGGACCATTCTTATTCAAACCACCATAGCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAACACTTGAGTATATGAGGACCATTCTTATTCAAACCACCATAGCACGT  250

seq1  GATTTGAGGGTTGTGTCAAGTTGACAGTTAAACTAGCAGTCATTGGCTGG  300
      |||||||||||||||||| ||||||||||||||||  | || ||||||||
seq2  GATTTGAGGGTTGTGTCATGTTGACAGTTAAACTATAATTCCTTGGCTGG  300

seq1  TGAGATGGCTCAGTGGGTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGA  350
      ||||||||||||  |||||||| ||||||||||||||||  |||||||||
seq2  TGAGATGGCTCATCGGGTAAGAACACTGACTGCTCTTCCTCAGGTCCTGA  350

seq1  GTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||| ||  ||||
seq2  GTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG-AAGTAGAT  399

seq1  CTGACTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATA  450
      ||||||||||||||||||| ||||||| |||||||| |||||||||||||
seq2  CTGACTCCCTCTTCTGGAGCGTCTGAACACAGCTACTGTGTACTTACATA  449

seq1  TAATAAATAAATAAATCTTTAAAAAAAAAAACTAACAGTCATATCTGCTC  500
      |||||||| ||| |||||||||| ||||||| |||||| | | ||||| |
seq2  TAATAAATTAATTAATCTTTAAAGAAAAAAAATAACAGGCTTCTCTGCCC  499

seq1  ATGATTGTCTCTTTAAAGAGTGTGGATAATAGGAGACCGTATACAACAAA  550
      ||||||||||||||||| | ||||||||| |||||||| ||| |||||||
seq2  ATGATTGTCTCTTTAAA-AATGTGGATAAAAGGAGACCTTAT-CAACAAA  547

seq1  CCTCCTCTGAGGCCTAAAATCAGACCCTAAAAGTGGTAAACAGAAATTAC  600
      |||||||||| ||||||||||||||||| |||||||||||||||||||||
seq2  CCTCCTCTGAAGCCTAAAATCAGACCCT-AAAGTGGTAAACAGAAATTAC  596

seq1  ACAGACTTAAATGAAACAGAATTTAAGTGGATCATCTTCTGGGAGCAGGG  650
      |||||| |||||||||||| |||||||||||||||||||| |||||||||
seq2  ACAGAC-TAAATGAAACAG-ATTTAAGTGGATCATCTTCT-GGAGCAGGG  643

seq1  ATAGTTACAATT  662
      ||||||||| ||
seq2  ATAGTTACATTT  655