BAC Information

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BAC

Clone NameB6Ng01-083I09
Chromosome8 (Build37)
Map Location 79,875,387 - 80,030,332
singlet/doubletdoublet
Overlap geneArhgap10
Upstream geneLOC666226, LOC100039211, LOC384847, Nr3c2
Downstream geneLOC100039235, AI931714, Tmem34, Ednra, EG622803, Ttc29, Pou4f2, LOC100039422, Rbmxrt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083I09.bB6Ng01-083I09.g
ACCDH897764DH897765
length1,144356
definitionDH897764|Mus musculus domesticus DNA, BAC clone: B6Ng01-083I09, 5' end.DH897765|Mus musculus domesticus DNA, BAC clone: B6Ng01-083I09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,875,387 - 79,876,545)(80,029,977 - 80,030,332)
sequence
gaattctaaaatgatctctccctttaacacagatggcaaaaccattaagt
tttcatgtgggaatatttaacgcgtgcacgccatcaaccacaaacctgag
tctttgcacacccacagaatacttactggctggaacaatgaagtctctgt
gtaactcataggtcatgagaggctctggaagactcctggaaaaaaaaaag
aaaaaaaaaaaaacacagcctaattaccaaacaaagccagacatcagctc
taagtttattcacagtgtactgaacctcctgtgcacttctgagctaacat
gccagctctccctgccagatagctttacataccaaaagacgtaaccacaa
tgactgctctactaactgctattccccctagacgcagttaactcttaacc
aaccacaaattcttaccaggtcgatgcacatcaggttgcatatctaatct
tggaaagtatctttatgaacacctagctttgcatatgagttaagcaatac
aggcatagttttgaaaggcatctttaaaatattgatatcaaaagaataca
caggaagtattaaagaaacaaaaacaaagtctctcttgatatttctatta
aaataactttttaattttcatacctaaatacatacatacagaccagtggt
ccccaacccctttggggctggatatcatgtagttacattatgattcataa
ccacagcaaaattatagttataaagtagcaatgcaataagtttatggctg
agggtcaccacaacatgaggaactgtattaaggggctgtagcattaggaa
ggttgagaatcactgataaagaggaaacattaataataataatgataata
ataaaagatgactttgtagtctgtggctatgaaatagtgagacagaatca
gaacggtggccgtgttagtaacacacacagcattttagttttctgcaaac
tgcattatgcaaacagtagcatgatgctgagctctcatcaatcctgctaa
tatgttatatatctttgccaggccgggatgttaactgcatagctccagag
aaaaagtgtcaatcttcagactgctcgggcaggactgtgagcatttgaaa
gcctaaaactggctcgaattactcttgatgttaaacacagtcaa
aatgcatgacgtggacggaaggcagagaatggatatggaggtggcaccac
tgccgaagcctgtacaggcaggcgtcagtgagcatgtggcctctggaagg
cgcaggagaaccaacaatgatgacgagcaatggtcgactctgccagtttg
gagctgaagtttaataaatacacacaaactctacaggtttacatgaggga
gaaaacttagaataacatgtaatctataggtgctaaagaaggccttcggt
tggaagactactttcatccttcacaagccacagcacttcataaaagtagg
atgggctggcacttgtcggtaatgtcagcgttctagaggcgggggggggg
gtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_79875387_79876545
seq2: B6Ng01-083I09.b_46_1189

seq1  GAATTCTAAAATGATCTCTCCCTTTAACACAGATGGCAAAACCATTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAATGATCTCTCCCTTTAACACAGATGGCAAAACCATTAAGT  50

seq1  TTTCATGTGGGAATATTTAACGCGTGCACGCCATCAACCACAAACCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTGGGAATATTTAACGCGTGCACGCCATCAACCACAAACCTGAG  100

seq1  TCTTTGCACACCCACAGAATACTTACTGGCTGGAACAATGAAGTCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCACACCCACAGAATACTTACTGGCTGGAACAATGAAGTCTCTGT  150

seq1  GTAACTCATAGGTCATGAGAGGCTCTGGAAGACTCCTGGAAAAAAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCATAGGTCATGAGAGGCTCTGGAAGACTCCTGGAAAAAAAAAAG  200

seq1  AAAAAAAAAAAAACACAGCCTAATTACCAAACAAAGCCAGACATCAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAACACAGCCTAATTACCAAACAAAGCCAGACATCAGCTC  250

seq1  TAAGTTTATTCACAGTGTACTGAACCTCCTGTGCACTTCTGAGCTAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTATTCACAGTGTACTGAACCTCCTGTGCACTTCTGAGCTAACAT  300

seq1  GCCAGCTCTCCCTGCCAGATAGCTTTACATACCAAAAGACGTAACCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTCTCCCTGCCAGATAGCTTTACATACCAAAAGACGTAACCACAA  350

seq1  TGACTGCTCTACTAACTGCTATTCCCCCTAGACGCAGTTAACTCTTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCTCTACTAACTGCTATTCCCCCTAGACGCAGTTAACTCTTAACC  400

seq1  AACCACAAATTCTTACCAGGTCGATGCACATCAGGTTGCATATCTAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAAATTCTTACCAGGTCGATGCACATCAGGTTGCATATCTAATCT  450

seq1  TGGAAAGTATCTTTATGAACACCTAGCTTTGCATATGAGTTAAGCAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGTATCTTTATGAACACCTAGCTTTGCATATGAGTTAAGCAATAC  500

seq1  AGGCATAGTTTTGAAAGGCATCTTTAAAATATTGATATCAAAAGAATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATAGTTTTGAAAGGCATCTTTAAAATATTGATATCAAAAGAATACA  550

seq1  CAGGAAGTATTAAAGAAACAAAAACAAAGTCTCTCTTGATATTTCTATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTATTAAAGAAACAAAAACAAAGTCTCTCTTGATATTTCTATTA  600

seq1  AAATAACTTTTTAATTTTCATACCTAAATACATACATACAGACCAGTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTTTTTAATTTTCATACCTAAATACATACATACAGACCAGTGGT  650

seq1  CCCCAACCCCTTTGGGGCTGGATATCATGTAGTTACATTATGATTCATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACCCCTTTGGGGCTGGATATCATGTAGTTACATTATGATTCATAA  700

seq1  CCACAGCAAAATTATAGTTATAAAGTAGCAATGCAATAAGTTTATGGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCAAAATTATAGTTATAAAGTAGCAATGCAATAAGTTTATGGCTG  750

seq1  AGGGTCACCACAACATGAGGAACTGTATTAAGGGGCTGTAGCATTAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCACCACAACATGAGGAACTGTATTAAGGGGCTGTAGCATTAGGAA  800

seq1  GGTTGAGAATCACTGATAAAGAGGAAACATTAATAATAATAATGATAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGAATCACTGATAAAGAGGAAACATTAATAATAATAATGATAATA  850

seq1  ATAAAAGATGACTTTGTAGTCTGTGGCTATGAAATAGTGAGACAGAATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGATGACTTTGTAGTCTGTGGCTATGAAATAGTGAGACAGAATCA  900

seq1  GAACGGTGGCCGTGTTAGTAACACACACAGCATTTTAGTTTTCTGCAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGGTGGCCGTGTTAGTAACACACACAGCATTTTAGTTTTCTGCAAAC  950

seq1  TGCATTATGCAAACAGTAGCATGATGCTGAGCTCTCATCAATCCTGCTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTATGCAAACAGTAGCATGATGCTGAGCTCTCATCAATCCTGCTAA  1000

seq1  TATGTTAATATATCTTTGCCAGGCCGGGGATGTTAACTGCATAGCTCCCA  1050
      |||||| |||||||||||||||||| |||||||||||||||||||| |||
seq2  TATGTT-ATATATCTTTGCCAGGCC-GGGATGTTAACTGCATAGCT-CCA  1047

seq1  GAGAACAAGTGTCAATCTACAGAACTGCTCGGGCAGGGGACTGTGAGCAT  1100
      ||||| |||||||||||| ||| ||||||||||||  |||||||||||||
seq2  GAGAAAAAGTGTCAATCTTCAG-ACTGCTCGGGCA--GGACTGTGAGCAT  1094

seq1  TTGAAAGGCTATAAACCTGGGGCTCAGAATTCATCTTGAAATGTTTAAAA  1150
      ||||||| ||| ||||    ||||| |||||  |||||  |||||  |||
seq2  TTGAAAGCCTA-AAAC---TGGCTC-GAATTACTCTTG--ATGTT--AAA  1135

seq1  CACAGTCAA  1159
      |||||||||
seq2  CACAGTCAA  1144

seq1: chr8_80029977_80030332
seq2: B6Ng01-083I09.g_77_432 (reverse)

seq1  CCCCACCCCCCCCCCCGCCTCTAGAACGCTGACATTACCGACAAGTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCCCCCCCGCCTCTAGAACGCTGACATTACCGACAAGTGCCA  50

seq1  GCCCATCCTACTTTTATGAAGTGCTGTGGCTTGTGAAGGATGAAAGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCCTACTTTTATGAAGTGCTGTGGCTTGTGAAGGATGAAAGTAGT  100

seq1  CTTCCAACCGAAGGCCTTCTTTAGCACCTATAGATTACATGTTATTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAACCGAAGGCCTTCTTTAGCACCTATAGATTACATGTTATTCTAA  150

seq1  GTTTTCTCCCTCATGTAAACCTGTAGAGTTTGTGTGTATTTATTAAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTCCCTCATGTAAACCTGTAGAGTTTGTGTGTATTTATTAAACTT  200

seq1  CAGCTCCAAACTGGCAGAGTCGACCATTGCTCGTCATCATTGTTGGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAAACTGGCAGAGTCGACCATTGCTCGTCATCATTGTTGGTTCT  250

seq1  CCTGCGCCTTCCAGAGGCCACATGCTCACTGACGCCTGCCTGTACAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGCCTTCCAGAGGCCACATGCTCACTGACGCCTGCCTGTACAGGCT  300

seq1  TCGGCAGTGGTGCCACCTCCATATCCATTCTCTGCCTTCCGTCCACGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCAGTGGTGCCACCTCCATATCCATTCTCTGCCTTCCGTCCACGTCA  350

seq1  TGCATT  356
      ||||||
seq2  TGCATT  356