BAC Information

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BAC

Clone NameB6Ng01-083K03
Chromosome8 (Build37)
Map Location 45,351,398 - 45,498,157
singlet/doubletdoublet
Overlap genenone
Upstream geneZfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Downstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083K03.bB6Ng01-083K03.g
ACCDH897841DH897842
length1,1481,003
definitionDH897841|Mus musculus domesticus DNA, BAC clone: B6Ng01-083K03, 5' end.DH897842|Mus musculus domesticus DNA, BAC clone: B6Ng01-083K03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,496,997 - 45,498,157)(45,351,398 - 45,352,417)
sequence
gaattcatactgctatattgacttgtaaacttctacatagtatttctgct
tccctgtcctagtattaccaatcattttacaggggacttcattgtaaata
gtgtattgttataaagttttccatttagtctgatttccaacagtgttgct
gcatggtaccagcttgtcttgcataggaaatgagacatatttaattctct
ggttttaggcaacattgtgtttggctgagatttatttttgaagtcttaac
tgcagaatgtgatagtgacagaattgcatttgtgcttctgtgcaatttct
tttaatttgtgttttataatttttatttccttctaagttttttttaaaaa
aatctcaaggactgtcttatggattatgactggagccttctgtagtcatg
tgtatatgttcaagatcaagccttttatcagattacagatcctttcattt
acatttgtcattaaagtctatagcagatacttatctccattttatgatac
ttaaacattcattagctgctgtttgtaatgatacatttccttaataacac
agtacttatttcccaaccaacacagcctttattaaagcacagttgtctgt
agccccacagtgactaagggcagccattcacacagagccaggacacagga
gcaatgtatcttcctacagtatttgcaaatctacgtgagctcctggcctt
cattttccattttaagagtgcattttaattttaaaaatgaatataattgt
ttattctctaaacctgaaatagacattcctacaaatatgcatttcttata
tttatttatatctactatgagcatttcattttttttgacttcaatcataa
tacatctttcaagctatatatggaaacatattattttgtcttttatgcca
agattaagagtatgaatatttcaatatgtaagctttaatagctgagaaat
atgtttttcatcattcattatagtaggattccaatacaaaactatgtaat
ctactgactactcaccatccattatgaactaggtggcaaataaatctctg
gacttcatgtatgtatgaattatatatgtgtatgacatattggtatacaa
tatctggcattggaacttatgtggaatgaattaactaatatattgtgt
gaattcagaataattaaatttttttctcaaatttacatttaggcttctat
acatttcaaaagccatatattttatattagttggaattttttttctcatt
ggtaccgttagaaaagctgtatcgtagagaaggggaatgaaagtaatcaa
aactcattataggagttatcaaagaataactatatagatatatgcatata
tatacacacatatatacatatatacacatatatgtgtatatatatatata
tatatatatatatatatatatatatatatatatgtatatatctctatata
tgggggttcactcctcatatactgcttaccagaattgcggtctgccattt
caagtgtcttaccacactgtagaaaggtcatacttcttgcacctttcact
ttcttctgatctttctacacataaagaaaactgatcctaaacacgtttac
taaggcactcgaccgttactatccagtaagtatttgaaaactaatttcca
acactgaaacgagtttaaaacttggaacttgcttcctgtgtctgttccat
gtttccctcacaagaagccttggaaagactgctgcagctggatccatcag
ataactgaagcctctgagaggagggtatttttccacatatcttattttgg
gccaaaccctaaaattatccaaacatttactttttgatttgctggaaaga
ttaagttatttcttacaactttggctaaatgcatcccatagctcaaattt
aaattttttggctgaagaattcagttttacccagtgatccatagtttata
accaagaaaaacctgttgtaacactcacagttcctttggatcaagaaagc
tcttgtacacttgtttctcagtggacttatttctattcaagaagcaaagt
tggtataaaaaatgactgtttttaggttgtcttgaagggaaactgcatct
tattttcttatgtaactgcattgcctttacagaacagtccccatcactga
tta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45496997_45498157
seq2: B6Ng01-083K03.b_45_1192 (reverse)

seq1  ACACATATATATTATGTATATTCATCCATACATAAGTATACAAATAGACA  50
      ||||| |||||||| ||  |||||| |  |||||||| | |||   | ||
seq2  ACACA-ATATATTA-GTTAATTCATTC-CACATAAGT-TCCAA--TGCCA  44

seq1  GATATATGTATATACATATAGTCATACACATATATAAATTCATACATACA  100
      ||||| ||||||   |||| ||||||||||||||| ||||||||||||||
seq2  GATAT-TGTATACCAATAT-GTCATACACATATAT-AATTCATACATACA  91

seq1  TGAAGTCAAGGAGATATTATTTTGCAACCTAGTTCATAATGGATGGTGAG  150
      ||||||| | ||||| ||| ||||| ||||||||||||||||||||||||
seq2  TGAAGTCCA-GAGAT-TTA-TTTGCCACCTAGTTCATAATGGATGGTGAG  138

seq1  TAGTCAGTAGATTACATAGTTTTGTATTTGGAAT-CTACTATATTGAATG  199
      |||||||||||||||||||||||||| ||||||| |||||||| ||||||
seq2  TAGTCAGTAGATTACATAGTTTTGTA-TTGGAATCCTACTATAATGAATG  187

seq1  ATGAAAAACATACTTTCTCAGCTATTAAAGCTTACATATTGAAATATTCA  249
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAACATA-TTTCTCAGCTATTAAAGCTTACATATTGAAATATTCA  236

seq1  TACTCTTAATCTTGGCATAAAAGACAAAATAATATGTTTCCATATATAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTAATCTTGGCATAAAAGACAAAATAATATGTTTCCATATATAGC  286

seq1  TTGAAAGATGTATTATGATTGAAGTCAAAAAAAATGAAATGCTCATAGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGATGTATTATGATTGAAGTCAAAAAAAATGAAATGCTCATAGTA  336

seq1  GATATAAATAAATATAAGAAATGCATATTTGTAGGAATGTCTATTTCAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAATAAATATAAGAAATGCATATTTGTAGGAATGTCTATTTCAGG  386

seq1  TTTAGAGAATAAACAATTATATTCATTTTTAAAATTAAAATGCACTCTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGAATAAACAATTATATTCATTTTTAAAATTAAAATGCACTCTTA  436

seq1  AAATGGAAAATGAAGGCCAGGAGCTCACGTAGATTTGCAAATACTGTAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAAAATGAAGGCCAGGAGCTCACGTAGATTTGCAAATACTGTAGG  486

seq1  AAGATACATTGCTCCTGTGTCCTGGCTCTGTGTGAATGGCTGCCCTTAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACATTGCTCCTGTGTCCTGGCTCTGTGTGAATGGCTGCCCTTAGT  536

seq1  CACTGTGGGGCTACAGACAACTGTGCTTTAATAAAGGCTGTGTTGGTTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGGGGCTACAGACAACTGTGCTTTAATAAAGGCTGTGTTGGTTGG  586

seq1  GAAATAAGTACTGTGTTATTAAGGAAATGTATCATTACAAACAGCAGCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGTACTGTGTTATTAAGGAAATGTATCATTACAAACAGCAGCTA  636

seq1  ATGAATGTTTAAGTATCATAAAATGGAGATAAGTATCTGCTATAGACTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTTTAAGTATCATAAAATGGAGATAAGTATCTGCTATAGACTTT  686

seq1  AATGACAAATGTAAATGAAAGGATCTGTAATCTGATAAAAGGCTTGATCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAAATGTAAATGAAAGGATCTGTAATCTGATAAAAGGCTTGATCT  736

seq1  TGAACATATACACATGACTACAGAAGGCTCCAGTCATAATCCATAAGACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATATACACATGACTACAGAAGGCTCCAGTCATAATCCATAAGACA  786

seq1  GTCCTTGAGATTTTTTTAAAAAAAACTTAGAAGGAAATAAAAATTATAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGAGATTTTTTTAAAAAAAACTTAGAAGGAAATAAAAATTATAAA  836

seq1  ACACAAATTAAAAGAAATTGCACAGAAGCACAAATGCAATTCTGTCACTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATTAAAAGAAATTGCACAGAAGCACAAATGCAATTCTGTCACTA  886

seq1  TCACATTCTGCAGTTAAGACTTCAAAAATAAATCTCAGCCAAACACAATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTCTGCAGTTAAGACTTCAAAAATAAATCTCAGCCAAACACAATG  936

seq1  TTGCCTAAAACCAGAGAATTAAATATGTCTCATTTCCTATGCAAGACAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAAAACCAGAGAATTAAATATGTCTCATTTCCTATGCAAGACAAG  986

seq1  CTGGTACCATGCAGCAACACTGTTGGAAATCAGACTAAATGGAAAACTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACCATGCAGCAACACTGTTGGAAATCAGACTAAATGGAAAACTTT  1036

seq1  ATAACAATACACTATTTACAATGAAGTCCCCTGTAAAATGATTGGTAATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATACACTATTTACAATGAAGTCCCCTGTAAAATGATTGGTAATA  1086

seq1  CTAGGACAGGGAAGCAGAAATACTATGTAGAAGTTTACAAGTCAATATAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACAGGGAAGCAGAAATACTATGTAGAAGTTTACAAGTCAATATAG  1136

seq1  CAGTATGAATTC  1161
      ||||||||||||
seq2  CAGTATGAATTC  1148

seq1: chr8_45351398_45352417
seq2: B6Ng01-083K03.g_67_1069

seq1  GAATTCAGAATAATTAAATTTTTTTCTCAAATTTACATTTAGGCTTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATAATTAAATTTTTTTCTCAAATTTACATTTAGGCTTCTAT  50

seq1  ACATTTCAAAAGCCATATATTTTATATTAGTTGGAATTTTTTTTCTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAAAAGCCATATATTTTATATTAGTTGGAATTTTTTTTCTCATT  100

seq1  GGTACCGTTAGAAAAGCTGTATCGTAGAGAAGGGGAATGAAAGTAATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCGTTAGAAAAGCTGTATCGTAGAGAAGGGGAATGAAAGTAATCAA  150

seq1  AACTCATTATAGGAGTTATCAAAGAATAACTATATAGATATATGCATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTATAGGAGTTATCAAAGAATAACTATATAGATATATGCATATA  200

seq1  TATACACACATATATACATATATACACATATATGTGTATATATATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACATATATACATATATACACATATATGTGTATATATATATATA  250

seq1  TATATATATATATATATATATATATAGTTATCTGTCCTGTGATTTGTGCA  300
      ||||||||||||||||||||||||||  ||| |||  | | || | |  |
seq2  TATATATATATATATATATATATATATATATATGT-ATAT-ATCTCTATA  298

seq1  CA--GAGTATCACTCTTCTGCCCACTGCTTATCAGAATTGCTGTCTGCCA  348
       |  | |  |||||| ||     |||||||| ||||||||| ||||||||
seq2  TATGGGGGTTCACTCCTC-ATATACTGCTTACCAGAATTGCGGTCTGCCA  347

seq1  TTTCAAGTGTCTTACCACACTGTAGAAAGGTCATACTTCTTGCACCTTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGTGTCTTACCACACTGTAGAAAGGTCATACTTCTTGCACCTTTC  397

seq1  ACTTTCTTCTGATCTTTCTACACATAAAGAAAACTGATCCTAAACACGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTCTGATCTTTCTACACATAAAGAAAACTGATCCTAAACACGTT  447

seq1  TACTAAGGCACTCGACCGTTACTATCCAGTAAGTATTTGAAAACTAATTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGGCACTCGACCGTTACTATCCAGTAAGTATTTGAAAACTAATTT  497

seq1  CCAACACTGAAACGAGTTTAAAACTTGGAACTTGCTTCCTGTGTCTGTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACTGAAACGAGTTTAAAACTTGGAACTTGCTTCCTGTGTCTGTTC  547

seq1  CATGTTTCCCTCACAAGAAGCCTTGGAAAGACTGCTGCAGCTGGATCCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCCCTCACAAGAAGCCTTGGAAAGACTGCTGCAGCTGGATCCAT  597

seq1  CAGATAACTGAAGCCTCTGAGAGGAGGGTA-TTTTCCACATATCTTATTT  647
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAGATAACTGAAGCCTCTGAGAGGAGGGTATTTTTCCACATATCTTATTT  647

seq1  TGGGCCAAACCCTAAAATTATCCAAACATTTAC-TTTTGATTTGCTGGAA  696
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGGGCCAAACCCTAAAATTATCCAAACATTTACTTTTTGATTTGCTGGAA  697

seq1  AGATTAAGTTATTTCTTACAACTTTGGCTAAATGCATCCCATAGCTCAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAGTTATTTCTTACAACTTTGGCTAAATGCATCCCATAGCTCAAA  747

seq1  TTTAAA-TTTTTGGCTGAAGAATTCAGTTTTACCCAAGTGATCCATAGTT  795
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTAAATTTTTTGGCTGAAGAATTCAGTTTTACCC-AGTGATCCATAGTT  796

seq1  TATAACCAAGAAAAACCTGTTGTAAACACTCACAG-TCCTTTGGATCAAG  844
      ||||||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  TATAACCAAGAAAAACCTGTTGT-AACACTCACAGTTCCTTTGGATCAAG  845

seq1  AAAGCTCTTGTAACACTTGTTTTCTCAGTGGGACTTATTTTCTAATTCAA  894
      ||||||||||| ||||||| ||||||||| ||||||| ||||| ||||||
seq2  AAAGCTCTTGT-ACACTTG-TTTCTCAGT-GGACTTA-TTTCT-ATTCAA  890

seq1  GAAGCAAAGTTGGTATAAAAAAAAGAGAACTGTTTTTAGGTTGTTCTTGA  944
      |||||||||||||||||||||    |  ||||||||||||||| ||||||
seq2  GAAGCAAAGTTGGTATAAAAA----ATGACTGTTTTTAGGTTG-TCTTGA  935

seq1  AGGGGAAAACTGCATCTTTATTTTCTTATTGTTAACTGCAATGCCATAAA  994
      ||||  |||||||||| ||||||||||||   |||||||| |||| | | 
seq2  AGGG--AAACTGCATC-TTATTTTCTTAT--GTAACTGCATTGCCTTTA-  979

seq1  CAAGAACAGTTCCCCATCACTGAGTA  1020
        ||||||| ||||||||||||| ||
seq2  -CAGAACAG-TCCCCATCACTGATTA  1003