BAC Information

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BAC

Clone NameB6Ng01-084A07
Chromosome8 (Build37)
Map Location 26,117,538 - 26,118,544
singlet/doubletsinglet
Overlap geneAdam9
Upstream geneZmat4, 1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32
Downstream geneTm2d2, Htra4, Plekha2, LOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1, Bag4, Lsm1, Star, Ash2l, Kcnu1, Hgsnat, 4930444A02Rik, Fnta
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084A07.bB6Ng01-084A07.g
ACCDH898108DH898109
length1,016232
definitionDH898108|Mus musculus domesticus DNA, BAC clone: B6Ng01-084A07, 5' end.DH898109|Mus musculus domesticus DNA, BAC clone: B6Ng01-084A07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacaggcccatgcattgcatttggtgctaattttataatttat
gaaatccccaacttccttttttttgtgcttaagtagatgtgtctgtgctc
ctccctcagcactgagctctgaaagtccatagatggtgaccttctctgag
ctctgaaggtccgtagatgatgaccagtgaccatctactgcattagactt
cactgaaagaatgttttactgtgggtgtggtggtgagctcctgtaatctc
aacacttggcccactgagggcaggaggtcatgagttcaaggtcatcttga
ataactagtgagatcttgtctcaaaagcaacaaacaataaagacagcaac
agaaaagaattgttatgccctttgtaatgatactgaaagagaaagctatt
ttgtgttgggctctgagagactatatcctactacagcattgttcctggtg
gtagtttttttgctttttgtttttttttgttttttttttttttgtttttt
ttttaaagatagggcttgttatgtgttactatgtatccctggctggccct
gaactcagagaaatccacctgtgtctatctacctcccaagtgctgactga
gattaacttggactatcaggtctggcccctggttttacagataactttag
attctcagggtgcatgactggagttcttaacagtagtttttgtgcaaaag
cccttgtgatggactcgtggtatagtcattccagatgagatagttggtac
ttgttagtatatactagagttgacccattagatattaaaagcatcctacc
cttcttatcaacttctgtccagcttcttagggtgtcattcaaggtgcata
gaaaggagggagagaggggtccatgtaatatattatatttatagtcagtg
tatgtgagttgtcttcagtcacaacagaaggaggggcattggattccttt
ttagatggctattgaacaaccatgtagttgcctgggaattgaactcagga
ccctttggaagaacat
caaccccataggaagaacattatcatctaacttgacctcttctcagctcc
cagagactaaactaccaaccagagtacacatgggctgatccatggcccgc
actacatatgtagcagaggattgccttatctggttggcatcagtgggagg
ggaggcgcttggtcctgtggaggcttgttgccccaccatagggggatgct
agaggggtgaggtgggagtcttgggttgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_26117538_26118544
seq2: B6Ng01-084A07.b_43_1058 (reverse)

seq1  ATGTTCTTCCAAA-GGTCCTGAGTTCAATTCCCA-GCAACTACATGGTGG  48
      ||||||||||||| |||||||||||||||||||| ||||||||||||| |
seq2  ATGTTCTTCCAAAGGGTCCTGAGTTCAATTCCCAGGCAACTACATGGTTG  50

seq1  TTC-ATAGCCATCTATAATGGAATCCAATGCCC--TCTTCTGGTGTGACT  95
      ||| ||||||||||| || ||||||||||||||   |||||| |||||||
seq2  TTCAATAGCCATCTAAAAAGGAATCCAATGCCCCTCCTTCTGTTGTGACT  100

seq1  GAAGACAACTCACATACACTGACTATAAATAT-ATATATTACATGGA-CC  143
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  GAAGACAACTCACATACACTGACTATAAATATAATATATTACATGGACCC  150

seq1  CTCTCTCCCTCCTTTCTATGCACCTTGAATGACACCCTAAG-AGCTGGAC  192
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCTCTCCCTCCTTTCTATGCACCTTGAATGACACCCTAAGAAGCTGGAC  200

seq1  AG-AGTTGATAAGAAGGGTAGGATGCTTTTAATATCTAATGGGTCAACTC  241
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGATAAGAAGGGTAGGATGCTTTTAATATCTAATGGGTCAACTC  250

seq1  TAGTATATACTAACAAGTACCAACTATCTCATCTGGAATGACTATACCAC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATATACTAACAAGTACCAACTATCTCATCTGGAATGACTATACCAC  300

seq1  GAGTCCATCACAAGGGCTTTTGCACAAAAACTACTGTTAAGAACTCCAGT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCATCACAAGGGCTTTTGCACAAAAACTACTGTTAAGAACTCCAGT  350

seq1  CATGCACCCTGAGAATCTAAAGTTATCTGTAAAACCAGGGGCCAGACCTG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACCCTGAGAATCTAAAGTTATCTGTAAAACCAGGGGCCAGACCTG  400

seq1  ATAGTCCAAGTTAATCTCAGTCAGCACTTGGGAGGTAGATAGACACAGGT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCAAGTTAATCTCAGTCAGCACTTGGGAGGTAGATAGACACAGGT  450

seq1  GGATTTCTCTGAGTTCAGGGCCAGCCAGGGATACATAGTAACACATAACA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTCTGAGTTCAGGGCCAGCCAGGGATACATAGTAACACATAACA  500

seq1  AGCCCTATCTTTAAAAAAAAAACAAAAAAAAAAAAAACAAAAAAAAACAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTATCTTTAAAAAAAAAACAAAAAAAAAAAAAACAAAAAAAAACAA  550

seq1  AAAGCAAAAAAACTACCACCAGGAACAATGCTGTAGTAGGATATAGTCTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAAAAACTACCACCAGGAACAATGCTGTAGTAGGATATAGTCTC  600

seq1  TCAGAGCCCAACACAAAATAGCTTTCTCTTTCAGTATCATTACAAAGGGC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCCCAACACAAAATAGCTTTCTCTTTCAGTATCATTACAAAGGGC  650

seq1  ATAACAATTCTTTTCTGTTGCTGTCTTTATTGTTTGTTGCTTTTGAGACA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATTCTTTTCTGTTGCTGTCTTTATTGTTTGTTGCTTTTGAGACA  700

seq1  AGATCTCACTAGTTATTCAAGATGACCTTGAACTCATGACCTCCTGCCCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCACTAGTTATTCAAGATGACCTTGAACTCATGACCTCCTGCCCT  750

seq1  CAGTGGGCCAAGTGTTGAGATTACAGGAGCTCACCACCACACCCACAGTA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGCCAAGTGTTGAGATTACAGGAGCTCACCACCACACCCACAGTA  800

seq1  AAACATTCTTTCAGTGAAGTCTAATGCAGTAGATGGTCACTGGTCATCAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCTTTCAGTGAAGTCTAATGCAGTAGATGGTCACTGGTCATCAT  850

seq1  CTACGGACCTTCAGAGCTCAGAGAAGGTCACCATCTATGGACTTTCAGAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGGACCTTCAGAGCTCAGAGAAGGTCACCATCTATGGACTTTCAGAG  900

seq1  CTCAGTGCTGAGGGAGGAGCACAGACACATCTACTTAAGCACAAAAAAAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGCTGAGGGAGGAGCACAGACACATCTACTTAAGCACAAAAAAAA  950

seq1  GGAAGTTGGGGATTTCATAAATTATAAAATTAGCACCAAATGCAATGCAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTGGGGATTTCATAAATTATAAAATTAGCACCAAATGCAATGCAT  1000

seq1  GGGCCTGTTTGAATTC  1007
      ||||||||||||||||
seq2  GGGCCTGTTTGAATTC  1016