BAC Information

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BAC

Clone NameB6Ng01-084H07
Chromosome6 (Build37)8 (Build37)
Map Location 18,835,442 - 18,835,968104,024,938 - 104,026,125
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084H07.bB6Ng01-084H07.g
ACCDH898407DH898408
length1,0181,170
definitionDH898407|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H07, 5' end.DH898408|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(104,024,938 - 104,026,125)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgtagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagatgactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcatgccagatattttatattatt
tgtgactatgagatggtgtgtttccctaatttcttttctcagcctgttta
tctttgtatagagaaagg
gaattcttatatatattgcttacttacatttaatctatatgtttagtgtt
gtcctgtagtaatttatcactgatttgcctttgacattttctgcatggtt
gagatattaaaaataataatgaagagaaatatccacaaatgaaaaagatg
tgaattataactaaaagagtctagaccagtgtttatttagatcttcatgt
gtatcaaagatcaaatatctaccaacatcgtcatttattgatagaacttt
aattttcctatttgactgatgataatgaagttttgagatgcaattaactc
tatgttacattaaataaaagatgggttgttatttgtatatattgtatttt
taattcatgaaaatctttacattttttactttgtttttatatgtggtgct
tctcctaatacatttctacattgcaaatagaattcaaacatcatctggcc
aaattcattaaggaagaattgtatagtttctgggtaagtatcttatacat
attggtggctaaccagtaagatatacatgtgctcttatttctcactcaat
tgttttagggtcagctaaccaattccagtctttcctctgaaaccaagact
aacatgaactacttgaaacttagaatagaagtgtgctttctcctattcct
atcccatctgcctcagtagcactggaaactttcttctatagaatgaataa
caagatgaaagtaaccagaagtcctaagaaacaggttcagtatgttaaaa
gaaagtagactttggtttaaacagaaaaataagtacatacacgcagttta
actttagatcttaagtgagtataatttgaggaccatttttggttttgttt
ggtttgtgtctactatgagaagtaacttgtcctatcttgacaaactgaag
ctacacacaacttaacctgatatgccttaggcaaccttgagttcaatttg
atggctacattcaaacaggttgaaactggaggagtatattctgattcaaa
cagctcacctcaagacaccaagctaggtagtatttatgatagacatagaa
cattgagttttgtaggatggaccttttgacgttttatggacttattattg
aagtggctcatgacacaatgtgacaaactaatatagggagaggtaagcat
gcatttctctcatccattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-084H07.b_51_578 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | ||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGATCGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTACAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr8_104024938_104026125
seq2: B6Ng01-084H07.g_67_1236 (reverse)

seq1  ATAATGGAATGAAGAGAATATGCATGCTTACCCTCTTGCCTTAT-TTATG  49
      ||||||| ||| |||||| ||||||||||| |||||  || ||| |||  
seq2  ATAATGG-ATG-AGAGAA-ATGCATGCTTA-CCTCT--CCCTATATTAGT  44

seq1  TTGTCAACAATGGTTGTCATTGGAGCACTTTCAATAAATAGTTCCACTAA  99
      ||||| ||| ||  ||||||  ||||   |||||| ||||  |||| |||
seq2  TTGTC-ACATTG--TGTCAT--GAGCCACTTCAAT-AATAAGTCCA-TAA  87

seq1  AACGTCCAAAAGTTCCATTCCTACAAAACTCAATGTTCTATGTCTATCAT  149
      ||||| |||||| |||| ||||||||||||||||||||||||||||||||
seq2  AACGT-CAAAAGGTCCA-TCCTACAAAACTCAATGTTCTATGTCTATCAT  135

seq1  AAATACTACCTAGCTTGGTGTCTTGAGGTGGAGCTGTTTTGAATTCAGAT  199
      ||||||||||||||||||||||||||||| |||||| |||||| ||||| 
seq2  AAATACTACCTAGCTTGGTGTCTTGAGGT-GAGCTG-TTTGAA-TCAGAA  182

seq1  TATACTCCTCCAGTTTCAACCCTGTTTGAATGTAGCCATCAAATTGAACT  249
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TATACTCCTCCAGTTTCAA-CCTGTTTGAATGTAGCCATCAAATTGAACT  231

seq1  CAAGGTTGCCTAAGGCATATCAGGTTAAGTTGTGTGTAGCTTCAGTTTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTGCCTAAGGCATATCAGGTTAAGTTGTGTGTAGCTTCAGTTTGT  281

seq1  CAAGATAGGACAAGTTACTTCTCATAGTAGACACAAACCAAACAAAACCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATAGGACAAGTTACTTCTCATAGTAGACACAAACCAAACAAAACCA  331

seq1  AAAATGGTCCTCAAATTATACTCACTTAAGATCTAAAGTTAAACTGCGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTCCTCAAATTATACTCACTTAAGATCTAAAGTTAAACTGCGTG  381

seq1  TATGTACTTATTTTTCTGTTTAAACCAAAGTCTACTTTCTTTTAACATAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACTTATTTTTCTGTTTAAACCAAAGTCTACTTTCTTTTAACATAC  431

seq1  TGAACCTGTTTCTTAGGACTTCTGGTTACTTTCATCTTGTTATTCATTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTGTTTCTTAGGACTTCTGGTTACTTTCATCTTGTTATTCATTCT  481

seq1  ATAGAAGAAAGTTTCCAGTGCTACTGAGGCAGATGGGATAGGAATAGGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGAAAGTTTCCAGTGCTACTGAGGCAGATGGGATAGGAATAGGAG  531

seq1  AAAGCACACTTCTATTCTAAGTTTCAAGTAGTTCATGTTAGTCTTGGTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACACTTCTATTCTAAGTTTCAAGTAGTTCATGTTAGTCTTGGTTT  581

seq1  CAGAGGAAAGACTGGAATTGGTTAGCTGACCCTAAAACAATTGAGTGAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAAGACTGGAATTGGTTAGCTGACCCTAAAACAATTGAGTGAGA  631

seq1  AATAAGAGCACATGTATATCTTACTGGTTAGCCACCAATATGTATAAGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAGCACATGTATATCTTACTGGTTAGCCACCAATATGTATAAGAT  681

seq1  ACTTACCCAGAAACTATACAATTCTTCCTTAATGAATTTGGCCAGATGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACCCAGAAACTATACAATTCTTCCTTAATGAATTTGGCCAGATGAT  731

seq1  GTTTGAATTCTATTTGCAATGTAGAAATGTATTAGGAGAAGCACCACATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAATTCTATTTGCAATGTAGAAATGTATTAGGAGAAGCACCACATA  781

seq1  TAAAAACAAAGTAAAAAATGTAAAGATTTTCATGAATTAAAAATACAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAAGTAAAAAATGTAAAGATTTTCATGAATTAAAAATACAATA  831

seq1  TATACAAATAACAACCCATCTTTTATTTAATGTAACATAGAGTTAATTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAATAACAACCCATCTTTTATTTAATGTAACATAGAGTTAATTGC  881

seq1  ATCTCAAAACTTCATTATCATCAGTCAAATAGGAAAATTAAAGTTCTATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAAACTTCATTATCATCAGTCAAATAGGAAAATTAAAGTTCTATC  931

seq1  AATAAATGACGATGTTGGTAGATATTTGATCTTTGATACACATGAAGATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGACGATGTTGGTAGATATTTGATCTTTGATACACATGAAGATC  981

seq1  TAAATAAACACTGGTCTAGACTCTTTTAGTTATAATTCACATCTTTTTCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAACACTGGTCTAGACTCTTTTAGTTATAATTCACATCTTTTTCA  1031

seq1  TTTGTGGATATTTCTCTTCATTATTATTTTTAATATCTCAACCATGCAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGATATTTCTCTTCATTATTATTTTTAATATCTCAACCATGCAGA  1081

seq1  AAATGTCAAAGGCAAATCAGTGATAAATTACTACAGGACAACACTAAACA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCAAAGGCAAATCAGTGATAAATTACTACAGGACAACACTAAACA  1131

seq1  TATAGATTAAATGTAAGTAAGCAATATATATAAGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||
seq2  TATAGATTAAATGTAAGTAAGCAATATATATAAGAATTC  1170