BAC Information

Click to search

BAC

Clone NameB6Ng01-085E15
Chromosome8 (Build37)
Map Location 44,496,407 - 44,497,121
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628212, Triml1, LOC622082, EG622117, LOC100039417, Zfp42
Downstream geneAdam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085E15.bB6Ng01-085E15.g
ACCDH899004DH899005
length1,258715
definitionDH899004|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E15, 5' end.DH899005|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagtagaaagtttgaaaatgagaagagcttggagcaatgagtt
ccaagtcctaaaaccctacaactgctacaatctagaataattcacagagt
aaaacaattccatgattaaagaaaaaagaagaagagaatccatgacataa
acagcttaaaaaatgttatagctaacaaaccaagcctgaagaaaataaag
gaaataatagtttgaccaaaagaaatgagtgagcatagcatatacaacat
gaatataaatatagcacaaggtaccaattaatacacaattgttgacttca
caatagccacaaataatgtcaaatagcctggggtaactctaaccaatcaa
gtgaaagatctgtatgacaataacttcaagtctctcaagaaagaaatcaa
agaagatctcagaaaacggagagtccgcccatgctcatggatggcagaat
taacatagtaaaaatggccatcctaccaaaggcaatctgcaatcttaagt
ttcactatatagcaatagtgataagaactgcatggtattggtacagagac
agacatgttaatcaatggactagaattgaagacccagaaataaaaccaca
cacttatggacacttgatctttggcaaagaagccaaacataaacattgga
aaaaagaaaacatcttcaacaaatggtgctggtctaactggctgtatgga
gaaaaatgaaaatagatccatatttatcaccttgcccaaagctcaagtcc
aagtggatcaaggacctcaacataaaaccatattagactgaatctaatag
aagaaaaagtaggaaagagccttgaactccttggcacagggagaaatttt
ctaaacagaactccaatggctcacactttaagatcaagaattcataaatg
ggacctcatgaaactaaaaagcttttgtaaggcaaggacatagtcaataa
gataaattggcaacctaaagatatggaaatgtatagaactcagagctaac
caccaaaaaaaaaaaaaaaaacatccaatgaaaaatggggtataggacta
aactgagtatcacaacacaccccgatggctgagagcacctaagaatgttc
aaagtcttacttatcgaggaatgccatcaaatgacctgagattcatctta
aacatcgattgcttagatcaaacctcaggtacaacagttgtagactgaag
gtaccctgtcttgctgtgatgtaatgtacatgctcatctggtaactcatc
ctcgcagt
gaattcccatgttatagcttcccctccaattaagggtcacctaaggggga
aatatttctattatttaggtggatgctaggacatttaaagtagattagga
aacccttaagaacactagttatttatggatttggacaaaaatacaacaaa
caacaatagaaccatggcagcttgtggaccagactgtgtggcactttctt
tattgatgattgatggtgggaggagcttggctgatggtagttcactgtga
gtgatgacaatctgtttagtggtccacagtcagataagcaagctgttcaa
gtaaggcatcaggagcaagccagtaagcagtgtaccatcatggcatctct
gttcagtgcctgcctttagtacctgcccttcagtcatagcatgtgatctg
agaatgacaagaggaaatagtgtctttcctctttaagcaacttttgtata
aaactagataaaacattgtggtagagacttaaaaatgagtttttcagctt
atatcttctatgattaacaaatctaacatcacattcaaattgtaaatctc
ttattatatcccatctttggtcagtgttatcaattttgcttccatagagc
acatgctatcgactcacaataaaactttcaacattaatacataactcaca
tagatgtaatatatatatatgtgtgtatatatatatatatatatatatat
gtatatgtgtgtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44496407_44497121
seq2: B6Ng01-085E15.g_71_785

seq1  GAATTCCCATGTTATAGCTTCCCCTCCAATTAAGGGTCACCTAAGGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGTTATAGCTTCCCCTCCAATTAAGGGTCACCTAAGGGGGA  50

seq1  AATATTTCTATTATTTAGGTGGATGCTAGGACATTTAAAGTAGATTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCTATTATTTAGGTGGATGCTAGGACATTTAAAGTAGATTAGGA  100

seq1  AACCCTTAAGAACACTAGTTATTTATGGATTTGGACAAAAATACAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTAAGAACACTAGTTATTTATGGATTTGGACAAAAATACAACAAA  150

seq1  CAACAATAGAACCATGGCAGCTTGTGGACCAGACTGTGTGGCACTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATAGAACCATGGCAGCTTGTGGACCAGACTGTGTGGCACTTTCTT  200

seq1  TATTGATGATTGATGGTGGGAGGAGCTTGGCTGATGGTAGTTCACTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATGATTGATGGTGGGAGGAGCTTGGCTGATGGTAGTTCACTGTGA  250

seq1  GTGATGACAATCTGTTTAGTGGTCCACAGTCAGATAAGCAAGCTGTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGACAATCTGTTTAGTGGTCCACAGTCAGATAAGCAAGCTGTTCAA  300

seq1  GTAAGGCATCAGGAGCAAGCCAGTAAGCAGTGTACCATCATGGCATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGCATCAGGAGCAAGCCAGTAAGCAGTGTACCATCATGGCATCTCT  350

seq1  GTTCAGTGCCTGCCTTTAGTACCTGCCCTTCAGTCATAGCATGTGATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTGCCTGCCTTTAGTACCTGCCCTTCAGTCATAGCATGTGATCTG  400

seq1  AGAATGACAAGAGGAAATAGTGTCTTTCCTCTTTAAGCAACTTTTGTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGACAAGAGGAAATAGTGTCTTTCCTCTTTAAGCAACTTTTGTATA  450

seq1  AAACTAGATAAAACATTGTGGTAGAGACTTAAAAATGAGTTTTTCAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGATAAAACATTGTGGTAGAGACTTAAAAATGAGTTTTTCAGCTT  500

seq1  ATATCTTCTATGATTAACAAATCTAACATCACATTCAAATTGTAAATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTCTATGATTAACAAATCTAACATCACATTCAAATTGTAAATCTC  550

seq1  TTATTATATCCCATCTTTGGTCAGTGTTATCAATTTTGCTTCCATAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATATCCCATCTTTGGTCAGTGTTATCAATTTTGCTTCCATAGAGC  600

seq1  ACATGCTATCGACTCACAATAAAACTTTCAACATTAATACATAACTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTATCGACTCACAATAAAACTTTCAACATTAATACATAACTCACA  650

seq1  TAGATGTAATATATATATATGTGTGTATATATATATATATATATATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTAATATATATATATGTGTGTATATATATATATATATATATATAT  700

seq1  GTATATGTGTGTGTG  715
      ||||||||||||| |
seq2  GTATATGTGTGTGAG  715