BAC Information

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BAC

Clone NameB6Ng01-085H06
Chromosome8 (Build37)
Map Location 67,775,657 - 67,776,780
singlet/doubletsinglet
Overlap genenone
Upstream geneCpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949
Downstream geneLOC665405, Vaultrc-ps1, LOC100040967, March1, LOC100040986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085H06.bB6Ng01-085H06.g
ACCDH899120DH899121
length1,1121,259
definitionDH899120|Mus musculus domesticus DNA, BAC clone: B6Ng01-085H06, 5' end.DH899121|Mus musculus domesticus DNA, BAC clone: B6Ng01-085H06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagacagcagttggttgagaggaagtttcaggaaatcatgatgag
agaggaaatggaggtctttttgtcaggttcatctttaagaccatgtaagt
ctcaagtgttctcacatttagaagccaggacattggataagacttccact
caaatgtttttgccatctagcacaatggaagaacttgaaattgaacctct
taaagttaaattgtatatagaaatactctattcagcttttctatttctga
gatagaactctgtccaaaatcaatgtggaaaagaaaagggttttcaggtc
acaggtgatagtccaccatcaagtaaaggagagcaggaactcaaggcaga
aatctagagtcaggcactgaagcagagatcatggcatgcttccatgcttg
ctcagctctccatcatatattacccatgatcatctgcccctgggtagtac
tgcccacagtggaataagccctcccattcaatcaaatcatcctacaaaca
tctccacaagatggcatagtaggaagaagaggctctagagaagcaagacc
gaagatggaagaatggaagtcaggaagctgtagtgatgtgaggacacacc
cactgccatccttgggtctgggagacagaagtatcgtgagctgaggaagc
agctgggggacagatgcccagtgcagatttgtctcagtgagggctgggga
atgaaacaaatgtccagtgtacaaggtggcagctttccaaagcacatgat
atgaagttggagcaggaaaaaaggcagagaagatgcactgaggcctctta
gtcattggtcagctgctgtacccagctggacatttattctgtccctttga
tggtctcttggtaggattcccaatgttctctctggaaaagcacatttatc
cttcaaatgttcttcaaggcaacttccactttctcctttaggaatctatt
ttttttttttttattgtcccacttgatatccagtcttttgagtttagtgc
tttgctcagatgaatatttaaattctgactatatttcatggaacactcag
aaatgggatatacagtgacacagagtagagtttctcttatgcatggcagc
tctctccttctt
gaattctcaccatttcttatttcaatttgtactacaaagctaaagtaata
aaaaccatatggtattgccatgaagacaatgttgatcaatggaattaaat
tgaagacctacatataaatccatacacttatggacacttggattattaaa
aggtagccagaaatacatattggaaaaaataaatcatcttcaacaaatgg
tgctggtcaaactggagatctgcatgtaaagaatgcaaagagatctatat
ttcaagtctaagtgaatcaaagacttcaacataaaactagatacactaaa
cctgatagaagagagagtagagaatatccttgaactcagtgcaggagatg
actttatgaacagaacaccatagcacatgcagtaagataatcaattaata
aatgggaactcaagaaactgaaaatcatctttaaagtaaaggacaccatc
aattggacaatatggcagcctacagaattggaaagataatctaaatgaga
gataatctaaatgagaggtctccctcaaatttctcctctctgagttcaag
gaacccaaagaagagatggttgaaagattgtaagagccagagggaatgga
ggacaccacaattataaggcctgatgaatcaactaaaaaaaggacacatg
agctcattgagatttaagtagcaagcacagggcctgtattggtctgcacc
aggtcttctgaatatataccatagctattatgccacaacagaccaagtgg
tgggctggttttcctgctctcaagactttgggttcagcttaccaatgtcc
atgccaccagggtcagctctactgtactgcccaggtaaggtgtggggccc
acttttcttgagtgctgcagccagtgagagccagggatactctcatacct
gccacatgcagcagaagggtgaggagtgagagagcatgtcttcctcacca
tcaccaccacagggcagacagagacaatgctagctcttctggtgcttact
aatgcctccacccccaggtcagctctactatgtctcagcaagatgcaggg
tccattttctcaaatgctgcagttggtgaggatgttggctgcttcgcggt
gaaggtgggattagggcaggctctaacagtctttaaacactccacatgtt
tccaggggagaaaaaacacaggggaaattggctgcctgtaggccatatga
gcatgactataagaaaagctcccctgtcggccatgaactcgtggaagccc
acgacaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_67775657_67776780
seq2: B6Ng01-085H06.b_49_1160

seq1  GAATTCAGACAGCAGTTGGTTGAGAGGAAG-GACAGGAAATCATGATGAG  49
      ||||||||||||||||||||||||||||||   |||||||||||||||||
seq2  GAATTCAGACAGCAGTTGGTTGAGAGGAAGTTTCAGGAAATCATGATGAG  50

seq1  AGAGGAAATGGAGGTCTTTTTGTCAGGTTCATCTTTAAGACCATGTAAGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAATGGAGGTCTTTTTGTCAGGTTCATCTTTAAGACCATGTAAGT  100

seq1  CTCAAGTGTTCTCACATTTAGAAGCCAGGACATTGGATAAGACTTCCACT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTGTTCTCACATTTAGAAGCCAGGACATTGGATAAGACTTCCACT  150

seq1  CAAATGTTTTTGCCATCTAGCACAATGGAAGAACTTGAAATTGAACCTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTTTTGCCATCTAGCACAATGGAAGAACTTGAAATTGAACCTCT  200

seq1  TAAAGTTAAATTGTATATAGAAATACTCTATTCAGCTTTTCTATTTCTGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTAAATTGTATATAGAAATACTCTATTCAGCTTTTCTATTTCTGA  250

seq1  GATAGAACTCTGTCCAAAATCAATGTGGAAAAGAAAAGGGTTTTCAGGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAACTCTGTCCAAAATCAATGTGGAAAAGAAAAGGGTTTTCAGGTC  300

seq1  ACAGGTGATAGTCCACCATCAAGTAAAGGAGAGCAGGAACTCAAGGCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGATAGTCCACCATCAAGTAAAGGAGAGCAGGAACTCAAGGCAGA  350

seq1  AATCTAGAGTCAGGCACTGAAGCAGAGATCATGGCATGCTTCCATGCTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGAGTCAGGCACTGAAGCAGAGATCATGGCATGCTTCCATGCTTG  400

seq1  CTCAGCTCTCCATCATATATTACCCATGATCATCTGCCCCTGGGTAGTAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTCTCCATCATATATTACCCATGATCATCTGCCCCTGGGTAGTAC  450

seq1  TGCCCACAGTGGAATAAGCCCTCCCATTCAATCAAATCATCCTACAAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACAGTGGAATAAGCCCTCCCATTCAATCAAATCATCCTACAAACA  500

seq1  TCTCCACAAGATGGCATAGTAGGAAGAAGAGGCTCTAGAGAAGCAAGACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACAAGATGGCATAGTAGGAAGAAGAGGCTCTAGAGAAGCAAGACC  550

seq1  GAAGATGGAAGAATGGAAGTCAGGAAGCTGTAGTGATGTGAGGACACACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGGAAGAATGGAAGTCAGGAAGCTGTAGTGATGTGAGGACACACC  600

seq1  CACTGCCATCCTTGGGTCTGGGAGACAGAAGTATCGTGAGCTGAGGAAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCATCCTTGGGTCTGGGAGACAGAAGTATCGTGAGCTGAGGAAGC  650

seq1  AGCTGGGGGACAGATGCCCAGTGCAGATTTGTCTCAGTGAGGGCTGGGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGGGACAGATGCCCAGTGCAGATTTGTCTCAGTGAGGGCTGGGGA  700

seq1  ATGAAACAAATGTCCAGTGTACAAGGTGGCAGCTTTCCAAAGCACATGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACAAATGTCCAGTGTACAAGGTGGCAGCTTTCCAAAGCACATGAT  750

seq1  ATGAAGTTGGAGCAGGAAAAAAGGCAGAGAAGATGCACTGAGGCCTCTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTGGAGCAGGAAAAAAGGCAGAGAAGATGCACTGAGGCCTCTTA  800

seq1  GTCATTGGTCAGGCTGCTGTACCCAGCTGGACATTTATTCTGTCCCTTTG  849
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGGTCA-GCTGCTGTACCCAGCTGGACATTTATTCTGTCCCTTTG  849

seq1  ATGGTCTCTTGGTAGGATTCCCAATGTTCTCTCTGGAAAAGCACATTTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTCTTGGTAGGATTCCCAATGTTCTCTCTGGAAAAGCACATTTAT  899

seq1  CCTTCAAATGTTCTTCAAGGCAACTTCCACTTTCTCCTTTAGGAATCTA-  948
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCTTCAAATGTTCTTCAAGGCAACTTCCACTTTCTCCTTTAGGAATCTAT  949

seq1  TTTTTTTTTTTTTATTGTCCCAACTTGATATCCAGTCTTTTTGAGTTTAA  998
      ||||||||||||||||||||| ||||||||||||||| |||||||||| |
seq2  TTTTTTTTTTTTTATTGTCCC-ACTTGATATCCAGTC-TTTTGAGTTT-A  996

seq1  GTGCTTTGCTCAGATGAAATATTTAAATTTCTGACTATATTTCATTGGAA  1048
      |||||||||||||||| |||||||||| |||||||||||||||| |||||
seq2  GTGCTTTGCTCAGATG-AATATTTAAA-TTCTGACTATATTTCA-TGGAA  1043

seq1  CACTCAGGAAAATTGGGATATTACAGTGACACAGAGTAGAGTTTTCTCTT  1098
      |||||||   || ||||||| |||||||||||||||||||| ||||||||
seq2  CACTCAG---AAATGGGATA-TACAGTGACACAGAGTAGAG-TTTCTCTT  1088

seq1  TAATGGCATGGGCAAGCT---TCCTTCTT  1124
        || ||||||   ||||   ||||||||
seq2  --AT-GCATGG--CAGCTCTCTCCTTCTT  1112