BAC Information

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BAC

Clone NameB6Ng01-085K18
Chromosome8 (Build37)
Map Location 89,441,107 - 89,557,830
singlet/doubletdoublet
Overlap genenone
Upstream genePhkb, LOC671665, LOC100040165, Abcc12, Lonp2, Siah1a, ENSMUSG00000074178, BC004022, LOC666960
Downstream geneEG625298, EG330819, Cbln1, LOC100040294, 4933402J07Rik, Zfp423
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085K18.bB6Ng01-085K18.g
ACCDH899283DH899284
length960240
definitionDH899283|Mus musculus domesticus DNA, BAC clone: B6Ng01-085K18, 5' end.DH899284|Mus musculus domesticus DNA, BAC clone: B6Ng01-085K18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,557,276 - 89,557,830)(89,441,107 - 89,441,340)
sequence
gaattcactgtgtaaaccagtctggcctcaaatccagagttctgacagct
aaatttatatttttctagatttaggcaaaagtatttcattcgtgtgtgtt
gatatgtttttaaatgtcagagtgtgcttgtttgttagtaatactatgta
ataattgatttaacacattaagtttataccccagagccttgctgtaggtc
attgctgctttcttggaaaacttttctctattcttttagacttttgatag
ataatctagcagtctatgaacaatagcagtttaacttcttttctatcaca
atcagcatatcttttattttaccttcttgtcatattgagttaggtctatc
aggataattttgagaaggaatgagtaagactggaaatccttgttttgttc
tgctatgagtaggaaagttggtttgttggcattactggggctagctggag
gtgttgtggctattccttgtgaagcagaggacagctattttccttctcta
tagtttttaaaatcacgaatgagtgttggatctggtcaagtaaattttct
tcatctattctacaataatatgatgtttctacttagcttgtgtgtagtgt
caattacattggctaatattaaaatgttaaatcaatcttgcatgtctgga
ataaattcctcttgttttcgacgtagaaatctttgtaaacaacattgtat
tcaatttgtcgatatttagctgcagatttttgtgtgggcttcatgaaaat
ataattctcatatgttttctttctcattgtatttttgtctatccttgggc
attgggtaatgctgatctcataggatgaactagagaatatttctttcttt
ttctttcttctgaaaaaatttatacagaatttattcctttttttccaatt
atgctttgtgcttttcttttcattttgttcaaatgcttttaatttctctt
gatatatgct
attgaaaaggctttctcctgaaaggttttgtttgatgtactttccagtgt
tggatcagttctttttttctcaggatttctgtcttcttgttgaattctat
tttcatatcctgaattaactccctcattttgttcttttattcagttgttt
gtattctctgtattcaggagattatttgtgacctcattcacctaattcac
atggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_89557276_89557830
seq2: B6Ng01-085K18.b_42_596 (reverse)

seq1  GATGAAGAAAATTTACTTGACCAGATCCAACACTCATTCGTGATTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGAAAATTTACTTGACCAGATCCAACACTCATTCGTGATTTTAAA  50

seq1  AACTATAGAGAAGGAAAATAGCTGTCCTCTGCTTCACAAGGAATAGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAGAGAAGGAAAATAGCTGTCCTCTGCTTCACAAGGAATAGCCAC  100

seq1  AACACCTCCAGCTAGCCCCAGTAATGCCAACAAACCAACTTTCCTACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTCCAGCTAGCCCCAGTAATGCCAACAAACCAACTTTCCTACTCA  150

seq1  TAGCAGAACAAAACAAGGATTTCCAGTCTTACTCATTCCTTCTCAAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAACAAAACAAGGATTTCCAGTCTTACTCATTCCTTCTCAAAATT  200

seq1  ATCCTGATAGACCTAACTCAATATGACAAGAAGGTAAAATAAAAGATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGATAGACCTAACTCAATATGACAAGAAGGTAAAATAAAAGATATG  250

seq1  CTGATTGTGATAGAAAAGAAGTTAAACTGCTATTGTTCATAGACTGCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGTGATAGAAAAGAAGTTAAACTGCTATTGTTCATAGACTGCTAG  300

seq1  ATTATCTATCAAAAGTCTAAAAGAATAGAGAAAAGTTTTCCAAGAAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTATCAAAAGTCTAAAAGAATAGAGAAAAGTTTTCCAAGAAAGCA  350

seq1  GCAATGACCTACAGCAAGGCTCTGGGGTATAAACTTAATGTGTTAAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGACCTACAGCAAGGCTCTGGGGTATAAACTTAATGTGTTAAATCA  400

seq1  ATTATTACATAGTATTACTAACAAACAAGCACACTCTGACATTTAAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTACATAGTATTACTAACAAACAAGCACACTCTGACATTTAAAAAC  450

seq1  ATATCAACACACACGAATGAAATACTTTTGCCTAAATCTAGAAAAATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAACACACACGAATGAAATACTTTTGCCTAAATCTAGAAAAATATA  500

seq1  AATTTAGCTGTCAGAACTCTGGATTTGAGGCCAGACTGGTTTACACAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGCTGTCAGAACTCTGGATTTGAGGCCAGACTGGTTTACACAGTG  550

seq1  AATTC  555
      |||||
seq2  AATTC  555

seq1: chr8_89441107_89441340
seq2: B6Ng01-085K18.g_82_315

seq1  AAGGCTTTCTCCTGAAAGGTTTTGTTTGATGTACTTTCCAGTGTTGGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTCTCCTGAAAGGTTTTGTTTGATGTACTTTCCAGTGTTGGATC  50

seq1  AGTTCTTTTTTTCTCAGGATTTCTGTCTTCTTGTTGAATTCTATTTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTTTTTCTCAGGATTTCTGTCTTCTTGTTGAATTCTATTTTCAT  100

seq1  ATCCTGAATTAACTCCCTCATTTTGTTCTTTTATTCAGTTGTTTGTATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAATTAACTCCCTCATTTTGTTCTTTTATTCAGTTGTTTGTATTC  150

seq1  TCTGTATTCAGGAGATTATTTGTGACCTCATTCACCTAATTCACATGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTCAGGAGATTATTTGTGACCTCATTCACCTAATTCACATGGTG  200

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  234
      ||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  234