BAC Information

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BAC

Clone NameB6Ng01-087M06
Chromosome8 (Build37)
Map Location 31,467,510 - 31,575,326
singlet/doubletdoublet
Overlap genenone
Upstream geneEG628189
Downstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087M06.bB6Ng01-087M06.g
ACCDH900798DH900799
length1,2021,159
definitionDH900798|Mus musculus domesticus DNA, BAC clone: B6Ng01-087M06, 5' end.DH900799|Mus musculus domesticus DNA, BAC clone: B6Ng01-087M06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,467,510 - 31,468,724)(31,574,161 - 31,575,326)
sequence
gaattcaccatttcttgattttcctcctcagtcagtgggatgtttttgcc
taagttgaccccatagtcaaacatgaaaatggaattcctatttaattcac
tattcccaaattacatctaaatgcagtgatcaacaacactcttggaaaga
agatattgtttcagatattctctcttctccattcctcatatgcaaatctc
aatttcttttcaggatatcatggtttgtcaacgcaatagtatctataata
ttaaatctaaccccaaaatagagttaaatggtgctagtaaatagccaatt
tcctacctcaagtcatgcatgcatacttaagttatagcaataaaacatga
gatcatttaggcaagctatttgaatctgactataataacaatcttttttg
gtagtaagtctagataagggtcatgctatatgtatttgtccaagatgtga
tggtatctatgcccttgcatcgccaaaggccatgttaatgcagatgacca
atattcaactttgaacctcccaatctgtgaagcaaatcagcctccttcct
ccttgtagctagcatcagatactttgttacagtaacacacagctaactga
cacacattttgtccactctgactcctactcttgcttagagcatcccaacc
aaaatccaagctttttctgcaggctctgtacctttgtttaagataatctt
tgtccatcctactcaagtgtctctagtgaattccacagctcaacttactt
tctctaggcacgcaagaagtctcaatcatttctcacatcttctgtgcttc
tgtatcttactcaccctccctttcaaatttagcaatctacacagcagatg
ttgacagtttctgtaatctaaataaactgcatctgtctcatcgacctacg
ctttaagcatcaaggaagaagagaaagggcacatagggtaataaaacaaa
atcccactatgcatcgagatagtatgcctggaagtgtacagatttatcca
gcctccagcagtagcagaaacaatgcataatctttgtggacaaagctgtt
tcccagaggagggatgagtaagaagactccctctgcatgctcatttattt
cttcaaagcatgatttgagtaagttgctttctccagaaagaatacttgag
gaacctcagtttagcacaggagctccctccacaagaaagcactcgaaaag
ga
gaattcctaacagaagttaccagaaggcaaaaacctccagagactgtgaa
gcttggctatagtgagaaatatctacgtggacactgagagtcctgccaaa
tggatatagtgagcaaggttgtctaagtagagggatagaaagtgctgact
gtgtcaaagactgctaggatcttctatgaagggctggtgggctggtctta
gctgtctttggagaagaaatttgtttcctcaggagagcaacactcttctt
tcagatctggaagaagggaagagcccagagagatcttgaataatattttt
cctatgaggcagcagtaagttctagaaggcatcatggaagggtatcagga
gaatggaaatctagaagaggacataggatgcagggtactggaggattagg
tgacttagagaagacatgagaagactgggatgcatcagcattttgtggtg
caaggaataaatgtaaattacagaatgcaactaatcctagcaggccaagg
tgaatagagagcttgaaacttgtgatgatagggctaggtaccaatataca
tttcatgttgaactcaggaatttattatgagccttggtgatgcaggatag
gagtttcagttgaagcctctttaatctcccagaaggcttcttgtttaaaa
aaaaatctgttgatttacaggctatttttgaagtgtacaagctggcaaca
gacaacactgtttgatttttgttcagtttgggttcagattgcttattttg
attacttattcagtttaataattgtgtccataaaagtctctagtttgcaa
cttcactaaataatggagaataattagatggagtttaatatacaatacag
cataggtcatatttgggtagggtgaaatatgaagaaaagatgcttttcat
ctttgcgctattgattctggttaaacgacctgaccaaggtaagattgata
ataaaaatggatagctttgatctaagacaaggaaacttctaaaggaggat
tgcaatatagtttgatattatttaggcacttaggatgcttctgggatact
tttttaagacttagtcagattccatgtttggagtttaacggtaatttgca
atctatagccttgattaattagagaatttccaacatcatgtcagcatatt
tcttagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_31467510_31468724
seq2: B6Ng01-087M06.b_48_1249

seq1  GAATTCACCATTTCTTGATTTTCCTCCTCAGTCAGTGGGATGTTTTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATTTCTTGATTTTCCTCCTCAGTCAGTGGGATGTTTTTGCC  50

seq1  TAAGTTGACCCCATAGTCAAACATGAAAATGGAATTCCTATTTAATTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGACCCCATAGTCAAACATGAAAATGGAATTCCTATTTAATTCAC  100

seq1  TATTCCCAAATTACATCTAAATGCAGTGATCAACAACACTCTTGGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCAAATTACATCTAAATGCAGTGATCAACAACACTCTTGGAAAGA  150

seq1  AGATATTGTTTCAGATATTCTCTCTTCTCCATTCCTCATATGCAAATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTGTTTCAGATATTCTCTCTTCTCCATTCCTCATATGCAAATCTC  200

seq1  AATTTCTTTTCAGGATATCATGGTTTGTCAACGCAATAGTATCTATAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTTTCAGGATATCATGGTTTGTCAACGCAATAGTATCTATAATA  250

seq1  TTAAATCTAACCCCAAAATAGAGTTAAATGGTGCTAGTAAATAGCCAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTAACCCCAAAATAGAGTTAAATGGTGCTAGTAAATAGCCAATT  300

seq1  TCCTACCTCAAGTCATGCATGCATACTTAAGTTATAGCAATAAAACATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCTCAAGTCATGCATGCATACTTAAGTTATAGCAATAAAACATGA  350

seq1  GATCATTTAGGCAAGCTATTTGAATCTGACTATAATAACAATCTTTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTTAGGCAAGCTATTTGAATCTGACTATAATAACAATCTTTTTTG  400

seq1  GTAGTAAGTCTAGATAAGGGTCATGCTATATGTATTTGTCCAAGATGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAGTCTAGATAAGGGTCATGCTATATGTATTTGTCCAAGATGTGA  450

seq1  TGGTATCTATGCCCTTGCATCGCCAAAGGCCATGTTAATGCAGATGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCTATGCCCTTGCATCGCCAAAGGCCATGTTAATGCAGATGACCA  500

seq1  ATATTCAACTTTGAACCTCCCAATCTGTGAAGCAAATCAGCCTCCTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAACTTTGAACCTCCCAATCTGTGAAGCAAATCAGCCTCCTTCCT  550

seq1  CCTTGTAGCTAGCATCAGATACTTTGTTACAGTAACACACAGCTAACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTAGCTAGCATCAGATACTTTGTTACAGTAACACACAGCTAACTGA  600

seq1  CACACATTTTGTCCACTCTGACTCCTACTCTTGCTTAGAGCATCCCAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTTTGTCCACTCTGACTCCTACTCTTGCTTAGAGCATCCCAACC  650

seq1  AAAATCCAAGCTTTTTCTGCAGGCTCTGTACCTTTGTTTAAGATAATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAAGCTTTTTCTGCAGGCTCTGTACCTTTGTTTAAGATAATCTT  700

seq1  TGTCCATCCTACTCAAGTGTCTCTAGTGAATTCCACAGCTCAACTTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATCCTACTCAAGTGTCTCTAGTGAATTCCACAGCTCAACTTACTT  750

seq1  TCTCTAGGCACGCAAGAAGTCTCAATCATTTCTCACATCTTCTGTGCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGGCACGCAAGAAGTCTCAATCATTTCTCACATCTTCTGTGCTTC  800

seq1  TGTATCTTACTCACCCTCCCTTTCAAATTTAGCAATCTACACAGCAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTTACTCACCCTCCCTTTCAAATTTAGCAATCTACACAGCAGATG  850

seq1  TTGACAGTTTCTGTAATCTAAATAAACTGCATCTGTCTCATCGACCTACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGTTTCTGTAATCTAAATAAACTGCATCTGTCTCATCGACCTACG  900

seq1  CTTTAAGCATCAAGGAAGAAAGAGAAAGGGCACATAGGGTAATAAAACAA  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTTAAGCATCAAGGAAG-AAGAGAAAGGGCACATAGGGTAATAAAACAA  949

seq1  AATCCCACTATGCATCGAGATAGTATGCCTGGAAGTGTACAGATTTATCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCACTATGCATCGAGATAGTATGCCTGGAAGTGTACAGATTTATCC  999

seq1  AGCCTCCAGCAGTAGCAGGAGACAATGCATAATCTATGTGGACAAAGCTG  1050
      ||||||||||||||||| || |||||||||||||| ||||||||||||||
seq2  AGCCTCCAGCAGTAGCA-GAAACAATGCATAATCTTTGTGGACAAAGCTG  1048

seq1  TTTCCCAGAGGGAGGGATGAGTAAG-AGACTTCACTCTGCATGCCTCATT  1099
      ||||||||| ||||||||||||||| |||| || ||||||||| ||||||
seq2  TTTCCCAGA-GGAGGGATGAGTAAGAAGAC-TCCCTCTGCATG-CTCATT  1095

seq1  TATCTCCTCAAAGGCAATGATCTGAGTAAGTTGC-TTCTCCAGGAAAGAA  1148
      ||| || ||||||   ||||| |||||||||||| ||||||| ||||| |
seq2  TATTTCTTCAAAG--CATGATTTGAGTAAGTTGCTTTCTCCA-GAAAG-A  1141

seq1  ATACTTGAGGAACATCCAGTTTAGCAACAGTGAAGCTCCCTCAACAAAGA  1198
      ||||||||||||| | ||||||||| |||  | ||||||||| || ||||
seq2  ATACTTGAGGAACCT-CAGTTTAGC-ACA--GGAGCTCCCTCCAC-AAGA  1186

seq1  AAGCATCAGGAAAAGGA  1215
      ||||| |  ||||||||
seq2  AAGCA-CTCGAAAAGGA  1202

seq1: chr8_31574161_31575326
seq2: B6Ng01-087M06.g_68_1226 (reverse)

seq1  ATGCTAAG-AATATGCTGACATGATGTTGAATATCCTCTATTTAAATCAA  49
      |||||||| |||||||||||||||||||| | || ||||| || ||||||
seq2  ATGCTAAGAAATATGCTGACATGATGTTGGAAATTCTCTAATT-AATCAA  49

seq1  AGCTATAGATTGCAAATTACCTTTAAACT-CAAACATGGGAATTCTGACT  98
       |||||||||||||||||||| ||||||| |||||||||  | |||||||
seq2  GGCTATAGATTGCAAATTACCGTTAAACTCCAAACATGG--AATCTGACT  97

seq1  AAGGTCTT-AAAAAGTATTCTCAGAAGCATTCCTAGTGCTTAAATAATAT  147
      || ||||| |||||||| || ||||||||| |  ||||| ||||||||||
seq2  AA-GTCTTAAAAAAGTA-TCCCAGAAGCATCCTAAGTGCCTAAATAATAT  145

seq1  CAAACTATATTTGCAATCCTCCTTTAG-AGTTTCCTTTGTCTTAGATCAA  196
      ||||||||| ||||||||||||||||| ||||||| ||||||||||||||
seq2  CAAACTATA-TTGCAATCCTCCTTTAGAAGTTTCC-TTGTCTTAGATCAA  193

seq1  AGCTATCCATTTTTTATTATCAATTCTTACCTTGGTCAGGTCGTTATAAC  246
      ||||||||| ||||||||||||| ||||||||||||||||||||| ||||
seq2  AGCTATCCA-TTTTTATTATCAA-TCTTACCTTGGTCAGGTCGTT-TAAC  240

seq1  CAGAATCAATAGCGCAAAAGATGAAAAGCATCTTTTCTTCATATTTCACC  296
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGAATCAATAGCGC-AAAGATGAAAAGCATCTTTTCTTCATATTTCACC  289

seq1  CTACCCAAATATGACCTATGCTGTATTGTATATTAAACTCCATCTAATTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAAATATGACCTATGCTGTATTGTATATTAAACTCCATCTAATTA  339

seq1  TTCTCCATTATTTAGTGAAGTTGCAAACTAGAGACTTTTATGGACACAAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATTATTTAGTGAAGTTGCAAACTAGAGACTTTTATGGACACAAT  389

seq1  TATTAAACTGAATAAGTAATCAAAATAAGCAATCTGAACCCAAACTGAAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAACTGAATAAGTAATCAAAATAAGCAATCTGAACCCAAACTGAAC  439

seq1  AAAAATCAAACAGTGTTGTCTGTTGCCAGCTTGTACACTTCAAAAATAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAAACAGTGTTGTCTGTTGCCAGCTTGTACACTTCAAAAATAGC  489

seq1  CTGTAAATCAACAGATTTTTTTTTAAACAAGAAGCCTTCTGGGAGATTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAATCAACAGATTTTTTTTTAAACAAGAAGCCTTCTGGGAGATTAA  539

seq1  AGAGGCTTCAACTGAAACTCCTATCCTGCATCACCAAGGCTCATAATAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTTCAACTGAAACTCCTATCCTGCATCACCAAGGCTCATAATAAA  589

seq1  TTCCTGAGTTCAACATGAAATGTATATTGGTACCTAGCCCTATCATCACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGTTCAACATGAAATGTATATTGGTACCTAGCCCTATCATCACA  639

seq1  AGTTTCAAGCTCTCTATTCACCTTGGCCTGCTAGGATTAGTTGCATTCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAAGCTCTCTATTCACCTTGGCCTGCTAGGATTAGTTGCATTCTG  689

seq1  TAATTTACATTTATTCCTTGCACCACAAAATGCTGATGCATCCCAGTCTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTACATTTATTCCTTGCACCACAAAATGCTGATGCATCCCAGTCTT  739

seq1  CTCATGTCTTCTCTAAGTCACCTAATCCTCCAGTACCCTGCATCCTATGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTCTTCTCTAAGTCACCTAATCCTCCAGTACCCTGCATCCTATGT  789

seq1  CCTCTTCTAGATTTCCATTCTCCTGATACCCTTCCATGATGCCTTCTAGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTAGATTTCCATTCTCCTGATACCCTTCCATGATGCCTTCTAGA  839

seq1  ACTTACTGCTGCCTCATAGGAAAAATATTATTCAAGATCTCTCTGGGCTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTGCTGCCTCATAGGAAAAATATTATTCAAGATCTCTCTGGGCTC  889

seq1  TTCCCTTCTTCCAGATCTGAAAGAAGAGTGTTGCTCTCCTGAGGAAACAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCTTCCAGATCTGAAAGAAGAGTGTTGCTCTCCTGAGGAAACAA  939

seq1  ATTTCTTCTCCAAAGACAGCTAAGACCAGCCCACCAGCCCTTCATAGAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTCCAAAGACAGCTAAGACCAGCCCACCAGCCCTTCATAGAAG  989

seq1  ATCCTAGCAGTCTTTGACACAGTCAGCACTTTCTATCCCTCTACTTAGAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGCAGTCTTTGACACAGTCAGCACTTTCTATCCCTCTACTTAGAC  1039

seq1  AACCTTGCTCACTATATCCATTTGGCAGGACTCTCAGTGTCCACGTAGAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGCTCACTATATCCATTTGGCAGGACTCTCAGTGTCCACGTAGAT  1089

seq1  ATTTCTCACTATAGCCAAGCTTCACAGTCTCTGGAGGTTTTTGCCTTCTG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCACTATAGCCAAGCTTCACAGTCTCTGGAGGTTTTTGCCTTCTG  1139

seq1  GTAACTTCTGTTAGGAATTC  1166
      ||||||||||||||||||||
seq2  GTAACTTCTGTTAGGAATTC  1159