BAC Information

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BAC

Clone NameB6Ng01-088L04
Chromosome8 (Build37)
Map Location 37,562,806 - 37,715,473
singlet/doubletdoublet
Overlap gene6430573F11Rik, Dlc1, LOC100042892
Upstream geneMfhas1, LOC100041572, Gm501, Cldn23, LOC671641, D8Ertd82e, Lonrf1, EG544878
Downstream geneA730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149, Sgcz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088L04.bB6Ng01-088L04.g
ACCDH901482DH901483
length676528
definitionDH901482|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L04, 5' end.DH901483|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,714,801 - 37,715,473)(37,562,806 - 37,563,339)
sequence
gaattcagaaagggattttatgctgtgccaaggattttaggcatctctgc
tgtcagacaccctggccacagaatattcctgtaggcaagaggtggttttt
aaccatcttaaagtgagactccatggctttaagtactcatagcatctgtg
cctgccttccctcactgaacaatgtcagcatgagatgcttccgcctgtaa
gaagtgatggagtgtccgttctcagtgcccagttgcccgttcaattatac
tgtttcactacagcttccatttatgtaagagttgtccttattaaatgtgt
atgggtgtttttgcctgcatgtatgacagtgtgccacatgcatgcaaaac
ccccagaaaacagaagagagcattggttcctcttaaaactgtagccatag
atagttgtgaggcactgtgtaggtgctcagaattgaacctggttctctat
aaaagcaaccaatgctcttaactgctgagcagtctctccagcctctgtca
cttgtatatgaatcttcttttgacatgcgtttgtgttttcaacttggact
ctcaaaaacgatactgctgtgagcagacttgaatatgttttcttgaacaa
tttcatgttattttgtatttgttacatgtttattgactatatcacagtag
atagatgtgaccaaatagttttccat
actaaggaggtttgagaaagaagcacacataataaataaggcgctgttta
tcttacatcttatgtctaaataaattctaaagtgcagcaaaggcttaagt
gtaagaaaatgaaattagggaggatagcgaactggttttaacattatcct
gatacagagggcctctctatgtcttttgtttgtttggttggttggtattt
ttggttttggtttttggtttttgggaacagctatgcactgatcatggact
cctgtcagttcccctgtttgcttgcatttccatgtaagggtttcttattc
cctatgtctttctttttttttttttttttttttttaaaaatttattttta
tttattatatgtaagtacactgtagctgtcttcagacactccagaaaagg
gcgtcagatcttgttacagatggttgtgagccaccatgtggttgctggga
tttgaactctggaccttctgaagagcaatcgggtgctcttacccactgag
ccatctcaccagtccccctaagtctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_37714801_37715473
seq2: B6Ng01-088L04.b_50_724 (reverse)

seq1  TGGAAAACTATTTGGTCACATCTATCTACTGTGATATAGTCAATAAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACTATTTGGTCACATCTATCTACTGTGATATAGTCAATAAACAT  50

seq1  GTTACAAATACAAA--TACATGAATTTGTTCAAGAAAACATATTCAAGTC  98
      || |||||||||||   ||||||| |||||||||||||||||||||||||
seq2  GTAACAAATACAAAATAACATGAAATTGTTCAAGAAAACATATTCAAGTC  100

seq1  TGCTCACAGCAGTATCGTTTTAGAGAGTCCAAGTTGAAAACACAAACGCA  148
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGCTCACAGCAGTATCGTTTTTGAGAGTCCAAGTTGAAAACACAAACGCA  150

seq1  TGTCAAAAGAAGATTCATATACAAGTGACAGAGGCTGGAGAGACTGCTCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAAGAAGATTCATATACAAGTGACAGAGGCTGGAGAGACTGCTCA  200

seq1  GCAGTTAAGAGCATTGGTTGCTTTTATAGAGAACCAGGTTCAATTCTGAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAAGAGCATTGGTTGCTTTTATAGAGAACCAGGTTCAATTCTGAG  250

seq1  CACCTACACAGTGCCTCACAACTATCTATGGCTACAGTTTTAAGAGGAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACACAGTGCCTCACAACTATCTATGGCTACAGTTTTAAGAGGAAC  300

seq1  CAATGCTCTCTTCTGTTTTCTGGGGGTTTTGCATGCATGTGGCACACTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTCTCTTCTGTTTTCTGGGGGTTTTGCATGCATGTGGCACACTGT  350

seq1  CATACATGCAGGCAAAAACACCCATACACATTTAATAAGGACAACTCTTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGCAGGCAAAAACACCCATACACATTTAATAAGGACAACTCTTA  400

seq1  CATAAATGGAAGCTGTAGTGAAACAGTATAATTGAACGGGCAACTGGGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATGGAAGCTGTAGTGAAACAGTATAATTGAACGGGCAACTGGGCA  450

seq1  CTGAGAACGGACACTCCATCACTTCTTACAGGCGGAAGCATCTCATGCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACGGACACTCCATCACTTCTTACAGGCGGAAGCATCTCATGCTG  500

seq1  ACATTGTTCAGTGAGGGAAGGCAGGCACAGATGCTATGAGTACTTAAAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTCAGTGAGGGAAGGCAGGCACAGATGCTATGAGTACTTAAAGC  550

seq1  CATGGAGTCTCACTTTAAGATGGTTAAAAACCACCTCTTGCCTACAGGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGTCTCACTTTAAGATGGTTAAAAACCACCTCTTGCCTACAGGAA  600

seq1  TATTCTGTGGCCAGGGTGTCTGACAGCAGAGATGCCTAAAATCCTTGGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTGGCCAGGGTGTCTGACAGCAGAGATGCCTAAAATCCTTGGCA  650

seq1  CAGCATAAAATCCCTTTCTGAATTC  673
      |||||||||||||||||||||||||
seq2  CAGCATAAAATCCCTTTCTGAATTC  675

seq1: chr8_37562806_37563339
seq2: B6Ng01-088L04.g_70_603

seq1  GAATTCACTAAGGAGGTTTGAGAAAGAAGCACACATAATAAATAAGGCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAGGAGGTTTGAGAAAGAAGCACACATAATAAATAAGGCGC  50

seq1  TGTTTATCTTACATCTTATGTCTAAATAAATTCTAAAGTGCAGCAAAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCTTACATCTTATGTCTAAATAAATTCTAAAGTGCAGCAAAGGC  100

seq1  TTAAGTGTAAGAAAATGAAATTAGGGAGGATAGCGAACTGGTTTTAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTAAGAAAATGAAATTAGGGAGGATAGCGAACTGGTTTTAACAT  150

seq1  TATCCTGATACAGAGGGCCTCTCTATGTCTTTTGTTTGTTTGGTTGGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGATACAGAGGGCCTCTCTATGTCTTTTGTTTGTTTGGTTGGTTG  200

seq1  GTATTTTTGGTTTTGGTTTTTGGTTTTTGGGAACAGCTATGCACTGATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTGGTTTTGGTTTTTGGTTTTTGGGAACAGCTATGCACTGATCA  250

seq1  TGGACTCCTGTCAGTTCCCCTGTTTGCTTGCATTTCCATGTAAGGGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCCTGTCAGTTCCCCTGTTTGCTTGCATTTCCATGTAAGGGTTTC  300

seq1  TTATTCCCTATGTCTTTCTTTTTTTTTTTTTTTTTTTTTTTAAAGATTTA  350
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTATTCCCTATGTCTTTCTTTTTTTTTTTTTTTTTTTTTTTAAAAATTTA  350

seq1  TTTTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAG  400

seq1  AAGAGGGCGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTG  450
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGCGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTG  450

seq1  CTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCC  500
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  CTGGGATTTGAACTCTGGACCTTCTGAAGAGCAATCGGGTGCTCTTACCC  500

seq1  ACTGAGCCATCTCACCAGCCCCCCTATGTCTTTC  534
      |||||||||||||||||| ||||||| |||||||
seq2  ACTGAGCCATCTCACCAGTCCCCCTAAGTCTTTC  534