BAC Information

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BAC

Clone NameB6Ng01-088P12
Chromosome8 (Build37)
Map Location 90,334,281 - 90,459,315
singlet/doubletdoublet
Overlap geneZfp423
Upstream geneBC004022, LOC666960, EG625298, EG330819, Cbln1, LOC100040294, 4933402J07Rik
Downstream geneLOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088P12.bB6Ng01-088P12.g
ACCDH901677DH901678
length1,2021,058
definitionDH901677|Mus musculus domesticus DNA, BAC clone: B6Ng01-088P12, 5' end.DH901678|Mus musculus domesticus DNA, BAC clone: B6Ng01-088P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,334,281 - 90,335,525)(90,458,253 - 90,459,315)
sequence
gaattccaggacagccaagggctacacggagaaaccctgtttcaaacctc
cagttccaagatttctgacaccctcatacagacatacacacaggcaaaca
ccaaagaatgtaatatacatacatatacatatacacatacacatacacat
acacatacacatacacatacacatacacatatacatatacatatacgtaa
cttagatgtgcccacaaggaagaaatgttaagttgtgggctggaaacagc
acaaaggtaaagtcagcacataaagcaaggatcacctccatggcaggatg
ctcaggcctggccaggagatcaggcacccagagcaggcaggcctcatgct
aggtcttaatttagggcaaaaatataaaagaaaaaataatgaggatcaac
atacgaaagcacagctagcatccaagagacagacactgtccagatagtag
gagacacggatacaatgggtcttcaaccagggcctgcctcccccagtgca
tgaggacatcgagtggcagctaatgtgtccctgacacatcacccacctta
ccagggagggcagcagggttctgagacatgacgtcactctgctagagcct
caaatgcagtcagaggtggagtctgctctgaccacaaggcaggagggagg
cgtgcataagacaagacttccaaactcactgggcagtggacctggtgaga
cgttgggtgaacaaagctaaggccacagcccagagggaagcatctggggt
gctcaggagtgcacagtggcccctggaacagagcacagtagaggaggcaa
ggccttcaatgggatgccttcagtatctcccagtgagggactcggcccta
cctctcccattcccatcttgacctcttatggggagaaagcccccctcagg
agacagcaagacagccttcccaccacgcaaacagacagacaaacagacag
agattagacagtgagagtagcttgtggcagagggtaaggagcagactact
gtctatatacattctttgcaccagattacatacagtgaaacgaagtgaca
ttataactgtgtgaccctgaagatatacttaacttctcgactcatttctc
ctcttatgttcaatcatgcatagccattcagatgtacatgctagaaatct
tgacagtataaagcgcttacactggtcgagcatgcctgaatcatgttgag
ag
gaattctttgtgtcccttcaggttcatgtctccttgtctctgccccagtg
gctgtgggttcagggacctcctgataatgaattagtatgaggaagagagg
cgatgtggggaagatgtcactttgagtggtcgcatcttcattctcacttc
cgttttctcgaacattacttactggctcattttagaacatgtcatagtct
cagtctgtgctctagacttgggcaccataatctggatgggtcagttgacc
caactggggtgatatttgttaggtgattctaaagcaactggaaattgctt
gagtgaaaatctggctggaccagaatagtcccaaccattaagaaatggct
tgacaaggacggaggtggaggaaccgggcctggcacatccacgtggatgc
ttcagcatccaggtccttggatcttggctgatttaagggagcctgcactt
taactgaagcagcgaagccaggcacctcaggatagctggagggctctgat
gtccccttatgggtacccctgtacttgctgtggaatgactggttggaaat
ctgcttagtccgggtcctgtgctcttttatcctgtggtctcctggtatct
tcccaatagctctctctccatggtattctcctgcttttatgaatgtctac
actgaagctctggcacttgaggtcctgtaacaggtaaatggatggacata
ttaggatttgaacctgggtttcccgcctctggagcccaccctctcaacac
ttatgccatgttttcagtttctccaactgccagggaggttaaatagaaag
cagaggaagcttccattatgaaccttttcttagctcttctgtcgggcggg
agcctggagtcgagcgctttttaaggtgttaagctgggagtctcctctcc
gccctgcttgatgacctgtactttgctgtgggtaagatttcccctcacga
tctaagtttcaaagtacagagatcctgaaaagatcctctggagaggggct
ggaacagctgccgagactggctggctgacagggtggtactcattctggcc
gagtactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_90334281_90335525
seq2: B6Ng01-088P12.b_51_1252

seq1  GAATTCCAGGACAGCCAAGGGCTACACGGAGAAACCCTGTTTCAAACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAAGGGCTACACGGAGAAACCCTGTTTCAAACCTC  50

seq1  CAGTTCCAAGATTTCTGACACCCTCATACAGACATACACACAGGCAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCAAGATTTCTGACACCCTCATACAGACATACACACAGGCAAACA  100

seq1  CCAAAGAATGTAATATACATACATATACATATACACATACACATACACAT  150
      ||||||||||||||||||||||||||||||      ||||||||||||||
seq2  CCAAAGAATGTAATATACATACATATACAT------ATACACATACACAT  144

seq1  ACACATACACATACACATACACATACACATACACATATACATATACATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACATACACATACACATACACATACACATATACATATACATAT  194

seq1  ACGTAACTTAGATGTGCCCACAAGGAAGAAATGTTAAGTTGTGGGCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAACTTAGATGTGCCCACAAGGAAGAAATGTTAAGTTGTGGGCTGGA  244

seq1  AACAGCACAAAGGTAAAGTCAGCACATAAAGCAAGGATCACCTCCATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCACAAAGGTAAAGTCAGCACATAAAGCAAGGATCACCTCCATGGC  294

seq1  AGGATGCTCAGGCCTGGCCAGGAGATCAGGCACCCAGAGCAGGCAGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCTCAGGCCTGGCCAGGAGATCAGGCACCCAGAGCAGGCAGGCCT  344

seq1  CATGCTAGGTCTTAATTTAGGGCAAAAATATAAAAGAAAAAATAATGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAGGTCTTAATTTAGGGCAAAAATATAAAAGAAAAAATAATGAGG  394

seq1  ATCAACATACGAAAGCACAGCTAGCATCCAAGAGACAGACACTGTCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACATACGAAAGCACAGCTAGCATCCAAGAGACAGACACTGTCCAGA  444

seq1  TAGTAGGAGACACGGATACAATGGGTCTTCAACCAGGGCCTGCCTCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGAGACACGGATACAATGGGTCTTCAACCAGGGCCTGCCTCCCCC  494

seq1  AGTGCATGAGGACATCGAGTGGCAGCTAATGTGTCCCTGACACATCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATGAGGACATCGAGTGGCAGCTAATGTGTCCCTGACACATCACCC  544

seq1  ACCTTACCAGGGAGGGCAGCAGGGTTCTGAGACATGACGTCACTCTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACCAGGGAGGGCAGCAGGGTTCTGAGACATGACGTCACTCTGCTA  594

seq1  GAGCCTCAAATGCAGTCAGAGGTGGAGTCTGCTCTGACCACAAGGCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCAAATGCAGTCAGAGGTGGAGTCTGCTCTGACCACAAGGCAGGA  644

seq1  GGGAGGCGTGCATAAGACAAGACTTCCAAACTCACTGGGCAGTGGACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCGTGCATAAGACAAGACTTCCAAACTCACTGGGCAGTGGACCTG  694

seq1  GTGAGACGTTGGGTGAACAAAGCTAAGGCCACAGCCCAGAGGGAAGCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACGTTGGGTGAACAAAGCTAAGGCCACAGCCCAGAGGGAAGCATC  744

seq1  TGGGGTGCTCAGGAGTGCACAGTGGCCCCTGGAACAGAGCACAGTAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGCTCAGGAGTGCACAGTGGCCCCTGGAACAGAGCACAGTAGAGG  794

seq1  AGGCAAGGCCTTCAATGGGATGCCTTCAGTATCTCCCAGTGAGGGACTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGGCCTTCAATGGGATGCCTTCAGTATCTCCCAGTGAGGGACTCG  844

seq1  GCCCTACCTCTCCCATTCCCATCTTGACCTCTTATGGGGAGAAAGCCCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACCTCTCCCATTCCCATCTTGACCTCTTATGGGGAGAAAGCCCCC  894

seq1  CTCAGGAGACAGCAAGACAGCCTTCCCACCACGCAAACAGACAGACAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGACAGCAAGACAGCCTTCCCACCACGCAAACAGACAGACAAAC  944

seq1  AGACAGAGATTAGACAAGTGAAGAGTAGCTTGTGGCAGAGGGTAAGGAGC  1000
      ||||||||||||||| |||| |||||||||||||||||||||||||||||
seq2  AGACAGAGATTAGAC-AGTG-AGAGTAGCTTGTGGCAGAGGGTAAGGAGC  992

seq1  AGACTACTGTCTTATATACATTCTTTGCACCAGAATTACATACAGTGAAA  1050
      ||||||||||| ||||||||||||||||||||| ||||||||||||| ||
seq2  AGACTACTGTC-TATATACATTCTTTGCACCAG-ATTACATACAGTG-AA  1039

seq1  ACGAAGTTGACATTTATAACTGTGTGACCCTGAAGATAATACTTAACTTC  1100
      |||||| ||||| |||||||||||||||||||||||| ||||||||||||
seq2  ACGAAG-TGACA-TTATAACTGTGTGACCCTGAAGAT-ATACTTAACTTC  1086

seq1  TCCGAACCTCCATTTTCTCTCTTTATTGTCTCATTCATGCCATAAAGCAA  1150
      | |||  |||   |||||| || |  ||| ||| ||||||   | ||| |
seq2  T-CGA--CTC--ATTTCTC-CTCTTATGT-TCAATCATGC---ATAGCCA  1126

seq1  TACAGAATAGTACCTATGCTAGATA-CTGAGCAGGGATAAAGAGGGCGGT  1199
      | ||||   ||||  |||||||| | ||   || | |||||| |      
seq2  TTCAGA--TGTAC--ATGCTAGAAATCTTGACA-GTATAAAGCG------  1165

seq1  CCTACACAACCCGTGGTTCGAAGCATGCCCTTGATCATGTTGAGAG  1245
      | |||||      ||| ||| |||||| |||  |||||||||||||
seq2  CTTACAC------TGG-TCG-AGCATG-CCTGAATCATGTTGAGAG  1202

seq1: chr8_90458253_90459315
seq2: B6Ng01-088P12.g_73_1130 (reverse)

seq1  AAGTACTCTGCCAGAATG-GTACCACCCCTGTCAGCCAGCCAGTTCCTCC  49
      |||||||| ||||||||| |||||| ||||||||||||||||||  || |
seq2  AAGTACTCGGCCAGAATGAGTACCA-CCCTGTCAGCCAGCCAGT--CT-C  46

seq1  GGCAGCTTGTTCCAGCCCCTCTCCAGAGGATCTTTTCAGGATCTCTGTAC  99
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGC-TGTTCCAGCCCCTCTCCAGAGGATCTTTTCAGGATCTCTGTAC  95

seq1  TTTGGAGACCTTAGATCGTG-GGCGAAATCTTACCCACAGCAAAGTACAG  148
      ||||   | ||||||||||| || ||||||||||||||||||||||||||
seq2  TTTG--AAACTTAGATCGTGAGGGGAAATCTTACCCACAGCAAAGTACAG  143

seq1  GTCATCAAGGCAGGGCGGAGAGGAGACT-CCAGCTTAACACCTTAAAAAG  197
      |||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  GTCATCAA-GCAGGGCGGAGAGGAGACTCCCAGCTTAACACCTTAAAAAG  192

seq1  CGCTCGACTCCAGGCTCCCGCCCGACAGAAGAGCTAAGAAAAGGTTCATA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCGACTCCAGGCTCCCGCCCGACAGAAGAGCTAAGAAAAGGTTCATA  242

seq1  ATGGAAGCTTCCTCTGCTTTCTATTTAACCTCCCTGGCAGTTGGAGAAAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGCTTCCTCTGCTTTCTATTTAACCTCCCTGGCAGTTGGAGAAAC  292

seq1  TGAAAACATGGCATAAGTGTTGAGAGGGTGGGCTCCAGAGGCGGGAAACC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACATGGCATAAGTGTTGAGAGGGTGGGCTCCAGAGGCGGGAAACC  342

seq1  CAGGTTCAAATCCTAATATGTCCATCCATTTACCTGTTACAGGACCTCAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCAAATCCTAATATGTCCATCCATTTACCTGTTACAGGACCTCAA  392

seq1  GTGCCAGAGCTTCAGTGTAGACATTCATAAAAGCAGGAGAATACCATGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGAGCTTCAGTGTAGACATTCATAAAAGCAGGAGAATACCATGGA  442

seq1  GAGAGAGCTATTGGGAAGATACCAGGAGACCACAGGATAAAAGAGCACAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCTATTGGGAAGATACCAGGAGACCACAGGATAAAAGAGCACAG  492

seq1  GACCCGGACTAAGCAGATTTCCAACCAGTCATTCCACAGCAAGTACAGGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCGGACTAAGCAGATTTCCAACCAGTCATTCCACAGCAAGTACAGGG  542

seq1  GTACCCATAAGGGGACATCAGAGCCCTCCAGCTATCCTGAGGTGCCTGGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCATAAGGGGACATCAGAGCCCTCCAGCTATCCTGAGGTGCCTGGC  592

seq1  TTCGCTGCTTCAGTTAAAGTGCAGGCTCCCTTAAATCAGCCAAGATCCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCTGCTTCAGTTAAAGTGCAGGCTCCCTTAAATCAGCCAAGATCCAA  642

seq1  GGACCTGGATGCTGAAGCATCCACGTGGATGTGCCAGGCCCGGTTCCTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGGATGCTGAAGCATCCACGTGGATGTGCCAGGCCCGGTTCCTCC  692

seq1  ACCTCCGTCCTTGTCAAGCCATTTCTTAATGGTTGGGACTATTCTGGTCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCGTCCTTGTCAAGCCATTTCTTAATGGTTGGGACTATTCTGGTCC  742

seq1  AGCCAGATTTTCACTCAAGCAATTTCCAGTTGCTTTAGAATCACCTAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGATTTTCACTCAAGCAATTTCCAGTTGCTTTAGAATCACCTAACA  792

seq1  AATATCACCCCAGTTGGGTCAACTGACCCATCCAGATTATGGTGCCCAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCACCCCAGTTGGGTCAACTGACCCATCCAGATTATGGTGCCCAAG  842

seq1  TCTAGAGCACAGACTGAGACTATGACATGTTCTAAAATGAGCCAGTAAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGCACAGACTGAGACTATGACATGTTCTAAAATGAGCCAGTAAGT  892

seq1  AATGTTCGAGAAAACGGAAGTGAGAATGAAGATGCGACCACTCAAAGTGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCGAGAAAACGGAAGTGAGAATGAAGATGCGACCACTCAAAGTGA  942

seq1  CATCTTCCCCACATCGCCTCTCTTCCTCATACTAATTCATTATCAGGAGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCCCACATCGCCTCTCTTCCTCATACTAATTCATTATCAGGAGG  992

seq1  TCCCTGAACCCACAGCCACTGGGGCAGAGACAAGGAGACATGAACCTGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAACCCACAGCCACTGGGGCAGAGACAAGGAGACATGAACCTGAA  1042

seq1  GGGACACAAAGAATTC  1063
      ||||||||||||||||
seq2  GGGACACAAAGAATTC  1058