BAC Information

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BAC

Clone NameB6Ng01-089J15
Chromosome8 (Build37)
Map Location 78,302,849 - 78,303,964
singlet/doubletsinglet
Overlap gene1700007B14Rik
Upstream geneIsx, Hmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507, LOC384845, LOC666211, LOC100039229, LOC666036
Downstream geneLOC100039185, EG631594, LOC666226, LOC100039211
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089J15.bB6Ng01-089J15.g
ACCDH902138DH902139
length2391,103
definitionDH902138|Mus musculus domesticus DNA, BAC clone: B6Ng01-089J15, 5' end.DH902139|Mus musculus domesticus DNA, BAC clone: B6Ng01-089J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tatcggaccttcaaagaaaacctaattccaattctcctcaaattattcca
caaaatagacacagatggtactctaaccaattcattctatgaagccacaa
ttactctgatacctaaaccacataaagacccaacaaagaaagagaacttc
agaccagtttcccttatgaatatcaatgcaaaaggccaggaccaagaagt
agtagtaggtgggtaggggaacagggcggggggagggta
gaattccttgggcttctttctaattaacctaattcagctcatccctttct
cccattaccaaaatcttctgggttttctgaggcaacgagataacctttta
actcatctttcccaaatgtgacagaattatatttttttctacttgataag
atggtgacaggtacataatgcttttttgtcttttgggagataagtaacat
tatgaaaccctttattgcctcaactcaaaggactggttaatgatgactga
tagactgtcaagcccggaagattttggggttctcgatactgcctcagttc
agaatgctgagtatcccatataaaatcaaggtattattttgttaacctga
ctaaaggtttttctattatattatttttttaaaaaaacaactctttgtgt
tattaattctttgtattgttttatttatttctattttactcaattcagct
ctgattttgatgtcccccccacatactttctgggtgttatttgttctttt
agaaggctcaaaggtacatcattatgttattaatttgagatcattaattt
tttatatataggcaccagagctataaacttttctcttgggagtgttttca
ttgtgccccatagtttttgctatgatgtattttcactttcattcagtttt
ggaaaatgttaactttccttcctgacttcttccttcatgtaattatgatt
ctatagtgtgctgcttagattccatgagtttgtgtactttctgtggtttc
tattgctgctgatgtgtggctttactctttgggttcaaatagaatgtaat
ttcagtttccctctattttttgagatttgctttttgtcttaatatgtggt
cagtttttatagaggattccacaggattctgagaagaatgtgcatttata
gtgtttggtaaaatgtctattgacatctgctggtcatttgattataatgc
ccacttatatccaagattctttgtttagcttcttttttctttcttctgaa
tacctgtctatggtgggcatggagtattaagaccacccactagctctgtg
ttgggatcacctgtgttttagaacttgctccatagcttgagcaagctctc
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_78302849_78303964
seq2: B6Ng01-089J15.g_69_1171

seq1  GAATTCCTTGGGCTTCTTTCTAATTAACCTAATTCAGCTCATCCCTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGGCTTCTTTCTAATTAACCTAATTCAGCTCATCCCTTTCT  50

seq1  CCCATTACCAAAATCTTCTGGGTTTTCTGAGGCAACGAGATAACCTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTACCAAAATCTTCTGGGTTTTCTGAGGCAACGAGATAACCTTTTA  100

seq1  ACTCATCTTTCCCAAATGTGACAGAATTATATTTTTTTCTACTTGATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCTTTCCCAAATGTGACAGAATTATATTTTTTTCTACTTGATAAG  150

seq1  ATGGTGACAGGTACATAATGCTTTTTTGTCTTTTGGGAGATAAGTAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGACAGGTACATAATGCTTTTTTGTCTTTTGGGAGATAAGTAACAT  200

seq1  TATGAAACCCTTTATTGCCTCAACTCAAAGGACTGGTTAATGATGACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAACCCTTTATTGCCTCAACTCAAAGGACTGGTTAATGATGACTGA  250

seq1  TAGACTGTCAAGCCCGGAAGATTTTGGGGTTCTCGATACTGCCTCAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGTCAAGCCCGGAAGATTTTGGGGTTCTCGATACTGCCTCAGTTC  300

seq1  AGAATGCTGAGTATCCCATATAAAATCAAGGTATTATTTTGTTAACCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCTGAGTATCCCATATAAAATCAAGGTATTATTTTGTTAACCTGA  350

seq1  CTAAAGGTTTTTCTATTATATTATTTTTTTAAAAAAACAACTCTTTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGTTTTTCTATTATATTATTTTTTTAAAAAAACAACTCTTTGTGT  400

seq1  TATTAATTCTTTGTATTGTTTTATTTATTTCTATTTTACTCAATTCAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTCTTTGTATTGTTTTATTTATTTCTATTTTACTCAATTCAGCT  450

seq1  CTGATTTTGATGTCCCCCCCACATACTTTCTGGGTGTTATTTGTTCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTGATGTCCCCCCCACATACTTTCTGGGTGTTATTTGTTCTTTT  500

seq1  AGAAGGCTCAAAGGTACATCATTATGTTATTAATTTGAGATCATTAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTCAAAGGTACATCATTATGTTATTAATTTGAGATCATTAATTT  550

seq1  TTTATATATAGGCACCAGAGCTATAAACTTTTCTCTTGGGAGTGTTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATAGGCACCAGAGCTATAAACTTTTCTCTTGGGAGTGTTTTCA  600

seq1  TTGTGCCCCATAGTTTTTGCTATGATGTATTTTCACTTTCATTCAGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCCCATAGTTTTTGCTATGATGTATTTTCACTTTCATTCAGTTTT  650

seq1  GGAAAATGTTAACTTTCCTTCCTGACTTCTTCCTTCATGTAATTATGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATGTTAACTTTCCTTCCTGACTTCTTCCTTCATGTAATTATGATT  700

seq1  CTATAGTGTGCTGCTTAGATTCCATGAGTTTGTGTACTTTCTGTGGTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTGTGCTGCTTAGATTCCATGAGTTTGTGTACTTTCTGTGGTTTC  750

seq1  TATTGCTGCTGATGTGTGGCTTTACTCTTTTGGGTTCAAATAGAATGTAA  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATTGCTGCTGATGTGTGGCTTTACTC-TTTGGGTTCAAATAGAATGTAA  799

seq1  TTTCAGTTTCCCTCTATTTTTTGAGACTTGCTTTTTGTCTTAATATGTGG  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTCAGTTTCCCTCTATTTTTTGAGATTTGCTTTTTGTCTTAATATGTGG  849

seq1  TCAGTTTTTATAGAGGATTCCACAGGATTCTGAGAAGAATGTGCATTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCAGTTTTTATAGAGGATTCCACAGGATTCTGAGAAGAATGTGCATTTA-  898

seq1  TAGTGTTTGGTTAGAATGTCTATTGACATCTGCTTGGTTCATTTGATTTA  950
      |||||||||| || ||||||||||||||||||||  | |||||||| |||
seq2  TAGTGTTTGG-TAAAATGTCTATTGACATCTGCT--GGTCATTTGA-TTA  944

seq1  TAATG-CCACTTATATCCAGATTTCTTTGTTTAGCTTCTTTTTTTCTTTC  999
      ||||| |||||||||||||   |||||||||||||||| |||||||||||
seq2  TAATGCCCACTTATATCCAAGATTCTTTGTTTAGCTTC-TTTTTTCTTTC  993

seq1  TTTCTGTATTACCTGTCTATTGGTGAGCATGGAGTATTAAAGACACCCAC  1049
       ||||| | |||||||||| ||||| ||||||||||||||   |||||||
seq2  -TTCTG-AATACCTGTCTA-TGGTGGGCATGGAGTATTAAGACCACCCAC  1040

seq1  TAGCTCTGTGTTGGGATCAACCTGTGGTTTTTAGATCTTGCTGCATAAGC  1099
      |||||||||||||||||| |||||||  ||||||| |||||| ||| |||
seq2  TAGCTCTGTGTTGGGATC-ACCTGTG--TTTTAGAACTTGCTCCAT-AGC  1086

seq1  TTGAGCAAGCTCTCCTT  1116
      |||||||||||||||||
seq2  TTGAGCAAGCTCTCCTT  1103