BAC Information

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BAC

Clone NameB6Ng01-090E05
Chromosome8 (Build37)
Map Location 97,389,696 - 97,495,353
singlet/doubletdoublet
Overlap geneDok4, LOC100040942, Ccdc102a, Gpr114
Upstream geneGnao1, Amfr, Nudt21, Ogfod1, Bbs2, Mt4, Mt3, Mt2, Mt1, Nup93, LOC100041555, Slc12a3, Herpud1, EG434339, AI451557, Cpne2, 2310065K24Rik, Rspry1, Arl2bp, Pllp, Ccl22, Cx3cl1, 1700121C10Rik, Ccl17, Ciapin1, LOC664947, Coq9, Polr2c
Downstream geneGpr56, Gpr97, Gm770, Katnb1, Kifc3, BC016201, Map1lc3-ps6, 1700055M20Rik, Zfp319, AA960436, Mmp15, Gtl3, Csnk2a2, 4933406B17Rik, Ccdc113, 4931432M23Rik, EG546088, LOC100041040, Gins3, LOC547022, Ndrg4, Setd6, Cnot1, LOC100041953, LOC100041088, BC031853, LOC100041972, Got2, LOC667445
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090E05.bB6Ng01-090E05.g
ACCDH902614DH902615
length380895
definitionDH902614|Mus musculus domesticus DNA, BAC clone: B6Ng01-090E05, 5' end.DH902615|Mus musculus domesticus DNA, BAC clone: B6Ng01-090E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,494,974 - 97,495,353)(97,389,696 - 97,390,591)
sequence
ctcccctcctccccttccctcttctctcttcttcttctctctcctcctct
ccttccttccatttccttcttcccctcttccccttttccttctttctctt
ctcccttctcccctcctcttcgttccccctcctctccctccttccctttt
cctgccccctttccctcttcctctccctcctctccctcctcctcctcatc
tcctctccctcgcccttcagctttctttctattttcttgtgatcaggact
tgctgtctgtagactggttctaaacttctggccttaagcaatcctcctgc
ctcatcctaccacgtagttgggaccacatgcacatgctgaactttaattt
gaggtatctgagtggagggagggagggagg
gaattccacttgtgtttgttgtttgtgtgtgtgtatatgtgtgtgtgtgt
gtgtgtgcgagcatgagcgcatgcaagttctaaatgccagctgtgggtgt
acaaggtcttcagggagagggtggccatggtctggggaattggccacagt
gcacaggctgagcagtagttaccacgtaccccgtggaggtttgaaagctt
cacggcaattattcatttagaggaacctaaagcatccaggaaaatagtca
ctcagccaaggttatacagagagtagtgtggagctgaagcctaataagca
ggctggtggaatcccagcaagggccttccctagctacaccatcatcctgt
caggctaggcacttttttaccctcctataggaaactggtactaaggccac
aaagaaagtgtcactgctggcagggactgagccagggagctgggctttgg
catacagcttcgcttgacctgcctgttacaagctaattacttctggcttt
gagttcctcaaatgtaaaactgaagcattatataccaccaccaccaccac
caccacccccgggggtggcaatctgatgaatgaatgtgcctgataccatg
cagagagagcagtctccataatggccatagcgagccaggatggtaagaaa
gagggtactacctgcccgcctcaaaggtaaagcgcgtagcatctcggcca
taacggcgcaaagagcagaggggccacgagacgagcttcacgcgggggtt
gtgtatgtcccagaggtagatgttctcgtgagtgatctgcagcttgcact
ccccatacacgtcaggttggggcagggtaacaggaagacgttgaagcgat
ctgtggcacagtagataacagctgaactaatgggtggtggagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_97494974_97495353
seq2: B6Ng01-090E05.b_53_432 (reverse)

seq1  CCTCCCTCCCTCCCTCCACTCAGATACCTCAAATTAAAGTTCAGCATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCTCCCTCCACTCAGATACCTCAAATTAAAGTTCAGCATGTG  50

seq1  CATGTGGTCCCAACTACGTGGTAGGATGAGGCAGGAGGATTGCTTAAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTCCCAACTACGTGGTAGGATGAGGCAGGAGGATTGCTTAAGGC  100

seq1  CAGAAGTTTAGAACCAGTCTACAGACAGCAAGTCCTGATCACAAGAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTTAGAACCAGTCTACAGACAGCAAGTCCTGATCACAAGAAAAT  150

seq1  AGAAAGAAAGCTGAAGGGCGAGGGAGAGGAGATGAGGAGGAGGAGGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGCTGAAGGGCGAGGGAGAGGAGATGAGGAGGAGGAGGGAGA  200

seq1  GGAGGGAGAGGAAGAGGGAAAGGGGGCAGGAAAAGGGAAGGAGGGAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGAGGAAGAGGGAAAGGGGGCAGGAAAAGGGAAGGAGGGAGAGG  250

seq1  AGGGGGAACGAAGAGGAGGGGAGAAGGGAGAAGAGAAAGAAGGAAAAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAACGAAGAGGAGGGGAGAAGGGAGAAGAGAAAGAAGGAAAAGGG  300

seq1  GAAGAGGGGAAGAAGGAAATGGAAGGAAGGAGAGGAGGAGAGAGAAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGGGAAGAAGGAAATGGAAGGAAGGAGAGGAGGAGAGAGAAGAAG  350

seq1  AAGAGAGAAGAGGGAAGGGGAGGAGGGGAG  380
      ||||||||||||||||||||||||||||||
seq2  AAGAGAGAAGAGGGAAGGGGAGGAGGGGAG  380

seq1: chr8_97389696_97390591
seq2: B6Ng01-090E05.g_69_963

seq1  GAATTCCACTTGTGTTTGTTGTTTGTGTGTGTGTATATGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTGTGTTTGTTGTTTGTGTGTGTGTATATGTGTGTGTGTGT  50

seq1  GTGTGTGCGAGCATGAGCGCATGCAAGTTCTAAATGCCAGCTGTGGGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCGAGCATGAGCGCATGCAAGTTCTAAATGCCAGCTGTGGGTGT  100

seq1  ACAAGGTCTTCAGGGAGAGGGTGGCCATGGTCTGGGGAATTGGCCACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTCTTCAGGGAGAGGGTGGCCATGGTCTGGGGAATTGGCCACAGT  150

seq1  GCACAGGCTGAGCAGTAGTTACCACGTACCCCGTGGAGGTTTGAAAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGCTGAGCAGTAGTTACCACGTACCCCGTGGAGGTTTGAAAGCTT  200

seq1  CACGGCAATTATTCATTTAGAGGAACCTAAAGCATCCAGGAAAATAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCAATTATTCATTTAGAGGAACCTAAAGCATCCAGGAAAATAGTCA  250

seq1  CTCAGCCAAGGTTATACAGAGAGTAGTGTGGAGCTGAAGCCTAATAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCAAGGTTATACAGAGAGTAGTGTGGAGCTGAAGCCTAATAAGCA  300

seq1  GGCTGGTGGAATCCCAGCAAGGGCCTTCCCTAGCTACACCATCATCCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTGGAATCCCAGCAAGGGCCTTCCCTAGCTACACCATCATCCTGT  350

seq1  CAGGCTAGGCACTTTTTTACCCTCCTATAGGAAACTGGTACTAAGGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAGGCACTTTTTTACCCTCCTATAGGAAACTGGTACTAAGGCCAC  400

seq1  AAAGAAAGTGTCACTGCTGGCAGGGACTGAGCCAGGGAGCTGGGCTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGTGTCACTGCTGGCAGGGACTGAGCCAGGGAGCTGGGCTTTGG  450

seq1  CATACAGCTTCGCTTGACCTGCCTGTTACAAGCTAATTACTTCTGGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGCTTCGCTTGACCTGCCTGTTACAAGCTAATTACTTCTGGCTTT  500

seq1  GAGTTCCTCAAATGTAAAACTGAAGCATTATATACCACCACCACCACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCTCAAATGTAAAACTGAAGCATTATATACCACCACCACCACCAC  550

seq1  CACCACCCCCGGGGGTGGCAATCTGATGAATGAATGTGCCTGATACCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCCCCGGGGGTGGCAATCTGATGAATGAATGTGCCTGATACCATG  600

seq1  CAGAGAGAGCAGTCTCCATAATGGCCATAGCGAGCCAGGATGGTAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAGCAGTCTCCATAATGGCCATAGCGAGCCAGGATGGTAAGAAA  650

seq1  GAGGGTACTACCTGCCCGCCTCAAAGGTAAAGCGCGTAGCATCTCGGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTACTACCTGCCCGCCTCAAAGGTAAAGCGCGTAGCATCTCGGCCA  700

seq1  TAACGGCGCAAAGAGCAGAGGGGCCACGAGACGAGCTTCACGCGGGGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGGCGCAAAGAGCAGAGGGGCCACGAGACGAGCTTCACGCGGGGGTT  750

seq1  GTGTATGTCCCAGAGGTAGATGTTCTCGTGAGTGATCTGCAGCTTGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTCCCAGAGGTAGATGTTCTCGTGAGTGATCTGCAGCTTGCACT  800

seq1  CCCCATACACGTCCAGGTTGGGGCAGGGTAACAGGAAGACGTTGAAGCGA  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCCCATACACGT-CAGGTTGGGGCAGGGTAACAGGAAGACGTTGAAGCGA  849

seq1  TCTGTGGCAGCAGTAGATAACAGCTGAGCTAATGGG-GGTGGAGGGG  896
      ||||||||| ||||||||||||||||| |||||||| ||||||||||
seq2  TCTGTGGCA-CAGTAGATAACAGCTGAACTAATGGGTGGTGGAGGGG  895