BAC Information

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BAC

Clone NameB6Ng01-090F19
Chromosome8 (Build37)
Map Location 14,822,750 - 14,823,835
singlet/doubletsinglet
Overlap geneDlgap2
Upstream geneAF366264, D8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103, 2610019F03Rik, EG546036, Erich1, LOC100041140, C030037F17Rik
Downstream geneCln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2, EG665599, EG234097, EG665619
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090F19.bB6Ng01-090F19.g
ACCDH902684DH902685
length1,2261,079
definitionDH902684|Mus musculus domesticus DNA, BAC clone: B6Ng01-090F19, 5' end.DH902685|Mus musculus domesticus DNA, BAC clone: B6Ng01-090F19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaacatttttcaagattttaatatttatatttttatttttta
attaaaatagatcattttaaacattatacattgtgatcaaattggacttg
ttccaggaatgcaagggtagttcaacaaatgagcatcaataaacgcagta
ctaaaggaaatcaagaacaaaatcacacagtcatctccatagattccaaa
aatgcctctgacaagatttaacatcccttcaatgatagacaccctgaaat
ctctgaatagagcaatcataattaaatatataaaaggagaatatttcgta
aacctgtaacatatcttgtattgaatggggaaatttgaaagagttttctc
taaaagccggtgtgagggatgtttgtgcactgtcttcactcttagtcaat
acagtgcttgaaatgctatccacagtggtgaggtaggaaaatttaattgg
aaataggaatggactgattaaaattatcccttttagcagatgagatggtt
gtatacctaaaagatcataaagactcctccagaaggcctttacattggat
attctggaggagggggaagccttcagcaaaataaactgagatgcatcaaa
tactctttcagtacactaacaaccaatccaatgagagagagatcaggaaa
gcagttcatttataacaacccctcatagacatgacaaagtagcccaggaa
tacacctaaagacaagaagacatctataaagaaaatgtataaagcagcga
agaaataaaattgaagaccacatcatagtgtggatagtccttcatgttcc
tggataagcataacgaatgtgaaaatggcttgttattgaaaaacacctat
agatttaaggcatctccatcaaaactggactaaaatttttaacaaaataa
tagccctaaagttctcaagaagcacaaaagcaaacggccttaaagagaaa
gagcaaggtgaggtgtcatagcacccacgtcggattgtattaacagaaac
aagacaacgcagcctagcactgcccacagcataatacatgacgatgacat
acgtcaagacccgaaggggagcctcacatatgtagtcatctgcttttgac
aaagatccaagcaatgtactgggaatgagccccagaagaaactagactcg
acctgactccacttgtcttatcagcaggaactagagctaatagagccttg
actctgagggttgagaaaaactttca
gaattcctcaggcttgcaaattgtgtcttcccctggagtgggggctgagg
tatttcctaggggttgtcaagggttctgtgcaacagcgtgatgcacccaa
cagagtgcctggcacatagagcctggacagagaggtgacgagagcagtca
tatgaagagtccaaagaagagagagaaaaaacttcatgcgagcttggatt
tggagagggttggtacttacatctgaccttgggtagggttgatgatcggg
gaattcagaatcctaaaaaaaccaacgaagccacagtgtggagacctggc
tcaaggacccaggccagtgggccgacacccccctgggtttcttcctgtcc
ccccagtcctatgtggaaccaacccttccagctctgtgaacttcctcctt
tgcaggatgtatgtgtggagaattaatcactatgattttaaaacctgcca
cacaggctgagctgaggcgcagaagcaagaggcaaacctacgttggcaaa
gcttggcttccgcaactgtgtctgctagggcttagaggaggtcacctgat
gccgtttgtgagacagagccctattttttgtattatgtgtgcttcaatgc
acctgagtcaagctctctgagtcaactgaggagtgggagggccagccagg
cttggagcagggaggataatgggatggtgggatacccttgcacggctgac
actacaggatactgctcctgtgtgtagaggcctctgggacagaaggccaa
gaagaagagcccagctgcacactgttccagttggtcacatgctcaactca
cagcacttgggtctgtctgcctcttttattcccaatactccacgagggct
gatgtgtttcaacaagttcatcccccctgttatagacatctggacacctc
tccaaccatcttcctagctgtaggtcttgagaccattaggtagtgtgtgg
tgaggaagtacaatgagtctcacctccctgggtcctgtcgtggggtctct
tctgctggtgcaggcactatggtcctcactatacttactgccctgcatct
gtaaggggccatacactgaggctgtgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_14822750_14823835
seq2: B6Ng01-090F19.g_69_1147 (reverse)

seq1  AGTCACAGCCCCAAGTGTTTGGCCCCTTAACAGAAGCAGGGCAGTAAATG  50
      |||||||||| | ||||| ||||||||| ||||| |||||||||||| | 
seq2  AGTCACAGCCTC-AGTGTATGGCCCCTT-ACAGATGCAGGGCAGTAAGT-  47

seq1  ATGCTGAGAGACCATATGTGCCTGCCACAGCATGAGAGACCCCAGGACAG  100
      ||  |||| ||||||| ||||||||  |||||  |||||||||| |||||
seq2  ATAGTGAG-GACCATA-GTGCCTGCACCAGCAGAAGAGACCCCACGACAG  95

seq1  AGCCCAGGGAGGTGAGACTCA-TGTACTTCCCTCA-CACACACTACCTAA  148
        ||||||||||||||||||| ||||||| ||||| ||||||||||||||
seq2  GACCCAGGGAGGTGAGACTCATTGTACTT-CCTCACCACACACTACCTAA  144

seq1  TGGTCCTCAGGACTGACAGCTAGGAAGATGGTTTGGAGAGGTTGTCCAGA  198
      |||| |||| |||  |||||||||||||||| ||||||||| ||||||||
seq2  TGGT-CTCAAGACCTACAGCTAGGAAGATGG-TTGGAGAGG-TGTCCAGA  191

seq1  TGTCTATAACAGGGGTGATGAACTTGTTGAAAACACATCAGCCCTCGTGG  248
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  TGTCTATAACAGGGGGGATGAACTTGTTG-AAACACATCAGCCCTCGTGG  240

seq1  AGTATTGGGAAT-AAAGAGGCAGACAGACCCAAGTGCTGTGAGTTGAGCA  297
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTATTGGGAATAAAAGAGGCAGACAGACCCAAGTGCTGTGAGTTGAGCA  290

seq1  TGTGACCAACTGGAACAGTGTGCAGCTGGGCTCTTCCTCTTGGCCTTCTG  347
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTGACCAACTGGAACAGTGTGCAGCTGGGCTCTTCTTCTTGGCCTTCTG  340

seq1  TCCCAGAGGCCTCTACACACAGGAGCAGTATCCTGTAGTGTCAGCCGTGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGGCCTCTACACACAGGAGCAGTATCCTGTAGTGTCAGCCGTGC  390

seq1  AAGGGTATCCCACCATCCCATTATCCTCCCTGCTCCAAGCCTGGCTGGCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTATCCCACCATCCCATTATCCTCCCTGCTCCAAGCCTGGCTGGCC  440

seq1  CTCCCACTCCTCAGTTGACTCAGAGAGCTTGACTCAGGTGCATTGAAGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACTCCTCAGTTGACTCAGAGAGCTTGACTCAGGTGCATTGAAGCA  490

seq1  CACATAATACAAAAAATAGGGCTCTGTCTCACAAACGGCATCAGGTGACC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATACAAAAAATAGGGCTCTGTCTCACAAACGGCATCAGGTGACC  540

seq1  TCCTCTAAGCCCTAGCAGACACAGTTGCGGAAGCCAAGCTTTGCCAACGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTAAGCCCTAGCAGACACAGTTGCGGAAGCCAAGCTTTGCCAACGT  590

seq1  AGGTTTGCCTCTTGCTTCTGCGCCTCAGCTCAGCCTGTGTGGCAGGTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGCCTCTTGCTTCTGCGCCTCAGCTCAGCCTGTGTGGCAGGTTTT  640

seq1  AAAATCATAGTGATTAATTCTCCACACATACATCCTGCAAAGGAGGAAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATAGTGATTAATTCTCCACACATACATCCTGCAAAGGAGGAAGT  690

seq1  TCACAGAGCTGGAAGGGTTGGTTCCACATAGGACTGGGGGGACAGGAAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGCTGGAAGGGTTGGTTCCACATAGGACTGGGGGGACAGGAAGA  740

seq1  AACCCAGGGGGGTGTCGGCCCACTGGCCTGGGTCCTTGAGCCAGGTCTCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGGGGGTGTCGGCCCACTGGCCTGGGTCCTTGAGCCAGGTCTCC  790

seq1  ACACTGTGGCTTCGTTGGTTTTTTTAGGATTCTGAATTCCCCGATCATCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGGCTTCGTTGGTTTTTTTAGGATTCTGAATTCCCCGATCATCA  840

seq1  ACCCTACCCAAGGTCAGATGTAAGTACCAACCCTCTCCAAATCCAAGCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACCCAAGGTCAGATGTAAGTACCAACCCTCTCCAAATCCAAGCTC  890

seq1  GCATGAAGTTTTTTCTCTCTCTTCTTTGGACTCTTCATATGACTGCTCTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAGTTTTTTCTCTCTCTTCTTTGGACTCTTCATATGACTGCTCTC  940

seq1  GTCACCTCTCTGTCCAGGCTCTATGTGCCAGGCACTCTGTTGGGTGCATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTCTCTGTCCAGGCTCTATGTGCCAGGCACTCTGTTGGGTGCATC  990

seq1  ACGCTGTTGCACAGAACCCTTGACAACCCCTAGGAAATACCTCAGCCCCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGTTGCACAGAACCCTTGACAACCCCTAGGAAATACCTCAGCCCCC  1040

seq1  ACTCCAGGGGAAGACACAATTTGCAAGCCTGAGGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGGGGAAGACACAATTTGCAAGCCTGAGGAATTC  1079