BAC Information

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BAC

Clone NameB6Ng01-090H12
Chromosome8 (Build37)5 (Build37)
Map Location 44,508,884 - 44,509,07316,299,802 - 16,300,902
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC628212, Triml1, LOC622082, EG622117, LOC100039417, Zfp42
Downstream geneAdam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090H12.bB6Ng01-090H12.g
ACCDH902760DH902761
length4981,079
definitionDH902760|Mus musculus domesticus DNA, BAC clone: B6Ng01-090H12, 5' end.DH902761|Mus musculus domesticus DNA, BAC clone: B6Ng01-090H12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(44,508,884 - 44,509,073)(16,299,802 - 16,300,902)
sequence
ttttctggatatatgaaatgagtacacttgcacaaaacgagtacctttgc
atttgtggtagccaacaagtatttgctgacaggagcctcatatagctatc
tctgagaggctttgccagagcctgacaaatacagaggtagatgctcacag
ccaaccactggactgagcacgggatccccaatgcagaagctagaggaaag
acccaaggagctgaaggggtttgtagccccataggaggaccaacaatgtg
aaccaacgagaaccaccagagctcccagggactaaaccaccaaccaaaga
gtatacatagagggacccttggctccatccatatatataaaacagaggat
ggccttgtcggacatcaatgagaggagagcctccttggtcctgggaaggc
ttggtgccccagtgtagtagaatgccaggacagggaagcaggattgggtg
ggttggtgagcaaggggaggggtatggaatagagggttttcggaggga
gaattcctgaattattgactacagtttgatactagaaatctttctgtggc
tgtaagggtctctgatttctttattatttgtgcatggtctttgtaaaagg
gcatgtgcaggtcagagtttgacatggcaggtctttttcaatggctctcc
accttactttttaacataggttctcttactaagtctggagtccaccaatt
tgactaggttgtctaaccagaaagatatgggaatcctcctgtctctgctg
ttcgtgttctggtatcataggatatgtgattctgcccatattttatgtcg
agctgaatacagaccctcaagcttgtgcaggaagctctttgtctagtgaa
ctattttcccagacatgtgacttttgatctttcctagccacattgcagca
aaatctgctcctaagactcttcaaccttctgcaatttggttgcaagacat
acattttcctatatgccctctgttagagtgatagtgtaactctctcttgg
atccctgatgaatcccctatgaatcctttcatataccttgttcaccactt
ttttataacatgaacatatctgcatctaattatgaaaaacatatgcacac
ttaatctctcatctcctgtggtgcttggtgttacctaaggtggaagctct
tgcaaacaagtgtttatacttttctcttgctcctcagtgtccccctcagc
ttattcactaaactagacacatgcaatcttgtttacttaaatcctttcag
ttctgccctcagtgtatgccacttttgaaaatctatcttaaaaatccttt
caggtggggcagtggtggcacacgcctttcatcccatcactagggaggca
gaggcaggcagattcctgagttttgagccagcctggtcacagagtggagt
tcaaggacagctagagctataacagagaaacctggtttcggaaacttaaa
ttactaaattaattaagtaattatataaataactaaataaattccgctct
tttcaccaacttgagaattttttctacctcatagctttcctcaaaaaatt
cattttcagagaacgtgcatgtctctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44508884_44509073
seq2: B6Ng01-090H12.b_326_518 (reverse)

seq1  TGCTCACCAACCCACCCACTCCTGCTTCCCTGTCCTGGCATTCCCCTACA  50
      |||||||||||||||||| ||||||||||||||||||||||||  |||||
seq2  TGCTCACCAACCCACCCAATCCTGCTTCCCTGTCCTGGCATTCTACTACA  50

seq1  CTGGTACATCGAGACTTCACAGAATCAAAG-GCCTTTCCTCCCATTGATG  99
      ||||  || | || |||| ||| | ||| | | || ||||| ||||||||
seq2  CTGGGGCACCAAGCCTTCCCAGGACCAAGGAGGCTCTCCTCTCATTGATG  100

seq1  ACCAACAATGCCATCCTCTG--CTACATATGCGGCTGGAGCCATGGGTAC  147
       || |||| |||||||||||   || ||||  || |||||||| |||| |
seq2  TCCGACAAGGCCATCCTCTGTTTTATATATATGGATGGAGCCAAGGGTCC  150

seq1  CTCCATGTGTTCTCTTTGGTTGGTGGTTTAGTCCCTGGGAGCT  190
      ||| |||| | ||||||||||||||||||||||||||||||||
seq2  CTCTATGTATACTCTTTGGTTGGTGGTTTAGTCCCTGGGAGCT  193

seq1: chr5_16299802_16300902
seq2: B6Ng01-090H12.g_68_1146

seq1  GAATTCCTGAATTATTGACTACAGTTTGATACTAGAAATCTTTCTGTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAATTATTGACTACAGTTTGATACTAGAAATCTTTCTGTGGC  50

seq1  TGTAAGGGTCTCTGATTTCTTTATTATTTGTGCATGGTCTTTGTAAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGGTCTCTGATTTCTTTATTATTTGTGCATGGTCTTTGTAAAAGG  100

seq1  GCATGTGCAGGTCAGAGTTTGACATGGCAGGTCTTTTTCAATGGCTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGCAGGTCAGAGTTTGACATGGCAGGTCTTTTTCAATGGCTCTCC  150

seq1  ACCTTACTTTTTAACATAGGTTCTCTTACTAAGTCTGGAGTCCACCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACTTTTTAACATAGGTTCTCTTACTAAGTCTGGAGTCCACCAATT  200

seq1  TGACTAGGTTGTCTAACCAGAAAGATATGGGAATCCTCCTGTCTCTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGGTTGTCTAACCAGAAAGATATGGGAATCCTCCTGTCTCTGCTG  250

seq1  TTCGTGTTCTGGTATCATAGGATATGTGATTCTGCCCATATTTTATGTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGTTCTGGTATCATAGGATATGTGATTCTGCCCATATTTTATGTCG  300

seq1  AGCTGAATACAGACCCTCAAGCTTGTGCAGGAAGCTCTTTGTCTAGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAATACAGACCCTCAAGCTTGTGCAGGAAGCTCTTTGTCTAGTGAA  350

seq1  CTATTTTCCCAGACATGTGACTTTTGATCTTTCCTAGCCACATTGCAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCCCAGACATGTGACTTTTGATCTTTCCTAGCCACATTGCAGCA  400

seq1  AAATCTGCTCCTAAGACTCTTCAACCTTCTGCAATTTGGTTGCAAGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGCTCCTAAGACTCTTCAACCTTCTGCAATTTGGTTGCAAGACAT  450

seq1  ACATTTTCCTATATGCCCTCTGTTAGAGTGATAGTGTAACTCTCTCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCCTATATGCCCTCTGTTAGAGTGATAGTGTAACTCTCTCTTGG  500

seq1  ATCCCTGATGAATCCCCTATGAATCCTTTCATATACCTTGTTCACCACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGATGAATCCCCTATGAATCCTTTCATATACCTTGTTCACCACTT  550

seq1  TTTTATAACATGAACATATCTGCATCTAATTATGAAAAACATATGCACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAACATGAACATATCTGCATCTAATTATGAAAAACATATGCACAC  600

seq1  TTAATCTCTCATCTCCTGTGGTGCTTGGTGTTACCTAAGGTGGAAGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCTCATCTCCTGTGGTGCTTGGTGTTACCTAAGGTGGAAGCTCT  650

seq1  TGCAAACAAGTGTTTATACTTTTCTCTTGCTCCTCAGTGTCCCCCTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACAAGTGTTTATACTTTTCTCTTGCTCCTCAGTGTCCCCCTCAGC  700

seq1  TTATTCACTAAACTAGACACATGCAATCTTGTTTACTTAAATCC-TTCAG  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTATTCACTAAACTAGACACATGCAATCTTGTTTACTTAAATCCTTTCAG  750

seq1  TTCTGCCCTCAGTGTATGCCACTTTTGAAAAATCTATCTTAAAAATCCTT  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTCTGCCCTCAGTGTATGCCACTTTTG-AAAATCTATCTTAAAAATCCTT  799

seq1  TCAGGGTGGGCAGTGGTGGCACACGCCTTTCATCCCATCACTAGGGAGGC  849
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGGGGCAGTGGTGGCACACGCCTTTCATCCCATCACTAGGGAGGC  849

seq1  AGAGGCAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCAACAGAGT-GA  898
      ||||||||||||||| ||||||||   |||||||||||| ||||||| ||
seq2  AGAGGCAGGCAGATTCCTGAGTTTTGAGCCAGCCTGGTC-ACAGAGTGGA  898

seq1  GTTCCAGGACAGCTAGAGCTAT-ACAGAGAAACCCTGTCTCGGAAAACCA  947
      |||| ||||||||||||||||| |||||||||||  || |||||||  | 
seq2  GTTCAAGGACAGCTAGAGCTATAACAGAGAAACCTGGTTTCGGAAA--CT  946

seq1  TAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAA  997
      ||||     | |||| |  ||| || |  ||| | |||||   || ||||
seq2  TAAA---TTACTAAATT--AATTAAGT--AATTATATAAA--TAACTAAA  987

seq1  ATAAAAATCCGCTCTTTCTCCACCAATCTTGAGACATTTTTCTACCTCAT  1047
         ||| |||||||||  | |||||| |||||||  ||||||||||||||
seq2  --TAAATTCCGCTCTT--TTCACCAA-CTTGAGAATTTTTTCTACCTCAT  1032

seq1  AGCTTTTCCTCAAAAAATTTCATTTTCAGAGAGAACCGTGGCATGTCTCC  1097
      ||| ||||||||||||| |||||||||||||   | ||| |||||||| |
seq2  AGC-TTTCCTCAAAAAA-TTCATTTTCAGAG---AACGT-GCATGTCT-C  1075

seq1  TGAT  1101
      ||||
seq2  TGAT  1079