BAC Information

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BAC

Clone NameB6Ng01-090J19
Chromosome8 (Build37)
Map Location 103,766,766 - 103,767,953
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090J19.bB6Ng01-090J19.g
ACCDH902863DH902864
length1,178494
definitionDH902863|Mus musculus domesticus DNA, BAC clone: B6Ng01-090J19, 5' end.DH902864|Mus musculus domesticus DNA, BAC clone: B6Ng01-090J19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatccttctaaaaatgtgttccaataggagctgactatacagct
cagtgaggagaacacttacctagcaaacataaggtcctaggttcctgggt
tctactcttagaacttaaaatcagtacttgagacatggtgacagaaggat
ctgctcaaggccatctttggctgtacaatgacctcaaggccagaccgggg
tacttgaggccctatcctaagaagatgaattccagttatcattgtcatca
gtttgtgtgccatgcttgcttacttgcttgccatatcactcacccccccc
agtgatataattttaagacatatctttaacaatgaacagtaatgctatgc
ttgctcctaaacacaataattagttcaagtattaggtaattttaaatttg
agaagatattatagtttatttaattttatgttttaatgtttatgtaatta
tgtgcttgcctaagagagaaaatttagtgaaccctttagcttttcattgc
catttacagaaatctctagccttatttctagaacactgggtactgactca
ggtattcttgagtatagatgatagcagaatagacttttctaatgagactg
tagagtctccagatattttaaaattgcagtgacattagcatggatgatgt
ccctgcctagtattctgtaagatagatgccaggttgggttagaggcctgg
ttgggaaatcattatattaacatgggaaatagcaatggtcttaaagcaaa
acacactttgaaagtaaagcaggttaactgcataagccaaatccaggaat
gttgactcagaactttatacacaaaatgaagataaaccctgtatatttta
ttgttaataaagatggatattagacctgttttcaaactatcatctatgcc
agaaggcattaacttagtgaataaaaccatgaagtgttaacttagtgagt
gtgagcatttgttaactgagataataaatcactaaaatgaacatgagcta
atgaacgggtgttatatcatatttactgattcaaaataatacatgaaatt
agcacaggtgtgaaagttttagaaatctagaataaatacctgcacgatcc
cttctgggttgcaaaccagacacatttgatccagtttattctacggtagc
tgaatcaatcagaatgaggcatttgttc

ctcctgtcaaaagcaagtgcaaggacaaagagtggagcagagacagaaag
gtcattcagagactgcccctcgggatccatcccatctgcaaaccccaaac
ccagacatttttgctaatgaaaggagggattactgacaggagcctgtata
gctgccagagactgaccaagacatagggggatgtatgcagccaaacatct
gactgagcatggggacccccagcggaggagttagagaaaggactgaagaa
gctaaaggggtttttaaccccataggaagaacagtatcaaccaaccaaaa
cctccaaactcccaggactaaaccagcaactaaagagtacatttagagac
tcttggctccagctggatatgtagcagaggattattttagtgggcatcgc
tgggagtggggcaccttggtcatgtggaggctcaatgatccagggtaggg
gaatcctagggtgctgaggtaggagtaggtgggttggtggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103766766_103767953
seq2: B6Ng01-090J19.b_49_1226 (reverse)

seq1  GAACAAATTGCCTCATTCTTGAATTGAATTTCAGCTACTCGTTAGAATAA  50
      ||||||| |||||||||||   |||||  ||||||||| || ||||||||
seq2  GAACAAA-TGCCTCATTCT--GATTGA--TTCAGCTAC-CG-TAGAATAA  43

seq1  ACCTTGTGATCAAATGTGTCTGGTTTGCAA-CCAGAAGGGATCGTGCAGG  99
      ||  || ||||||||||||||||||||||| |||||||||||||||||||
seq2  AC--TG-GATCAAATGTGTCTGGTTTGCAACCCAGAAGGGATCGTGCAGG  90

seq1  TA-TTATTCTAGATTTCTATAACTTTCACACTTGTGCTAATTTCATGTAT  148
      || |||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  TATTTATTCTAGATTTCTAAAACTTTCACACCTGTGCTAATTTCATGTAT  140

seq1  TATTTTGAATCAGTAAATATGATATTAACACCCCGTTCATTAGCTCATGT  198
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  TATTTTGAATCAGTAAATATGATA-TAACA-CCCGTTCATTAGCTCATGT  188

seq1  TCATTTTAGTGATTTATTATCTCAGTTAACAAATGCTCACACTCACTAAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTAGTGATTTATTATCTCAGTTAACAAATGCTCACACTCACTAAG  238

seq1  TTAACACTTCATGGTTTTATTCACTAAGTTAATGCCTTCTGGCATAGATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACTTCATGGTTTTATTCACTAAGTTAATGCCTTCTGGCATAGATG  288

seq1  ATAGTTTGAAAACAGGTCTAATATCCATCTTTATTAACAATAAAATATAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTGAAAACAGGTCTAATATCCATCTTTATTAACAATAAAATATAC  338

seq1  AGGGTTTATCTTCATTTTGTGTATAAAGTTCTGAGTCAACATTCCTGGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTATCTTCATTTTGTGTATAAAGTTCTGAGTCAACATTCCTGGAT  388

seq1  TTGGCTTATGCAGTTAACCTGCTTTACTTTCAAAGTGTGTTTTGCTTTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTATGCAGTTAACCTGCTTTACTTTCAAAGTGTGTTTTGCTTTAA  438

seq1  GACCATTGCTATTTCCCATGTTAATATAATGATTTCCCAACCAGGCCTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTGCTATTTCCCATGTTAATATAATGATTTCCCAACCAGGCCTCT  488

seq1  AACCCAACCTGGCATCTATCTTACAGAATACTAGGCAGGGACATCATCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAACCTGGCATCTATCTTACAGAATACTAGGCAGGGACATCATCCA  538

seq1  TGCTAATGTCACTGCAATTTTAAAATATCTGGAGACTCTACAGTCTCATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATGTCACTGCAATTTTAAAATATCTGGAGACTCTACAGTCTCATT  588

seq1  AGAAAAGTCTATTCTGCTATCATCTATACTCAAGAATACCTGAGTCAGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTCTATTCTGCTATCATCTATACTCAAGAATACCTGAGTCAGTA  638

seq1  CCCAGTGTTCTAGAAATAAGGCTAGAGATTTCTGTAAATGGCAATGAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTTCTAGAAATAAGGCTAGAGATTTCTGTAAATGGCAATGAAAA  688

seq1  GCTAAAGGGTTCACTAAATTTTCTCTCTTAGGCAAGCACATAATTACATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGGGTTCACTAAATTTTCTCTCTTAGGCAAGCACATAATTACATA  738

seq1  AACATTAAAACATAAAATTAAATAAACTATAATATCTTCTCAAATTTAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAAAACATAAAATTAAATAAACTATAATATCTTCTCAAATTTAAA  788

seq1  ATTACCTAATACTTGAACTAATTATTGTGTTTAGGAGCAAGCATAGCATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTAATACTTGAACTAATTATTGTGTTTAGGAGCAAGCATAGCATT  838

seq1  ACTGTTCATTGTTAAAGATATGTCTTAAAATTATATCACTGGGGGGGGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCATTGTTAAAGATATGTCTTAAAATTATATCACTGGGGGGGGTG  888

seq1  AGTGATATGGCAAGCAAGTAAGCAAGCATGGCACACAAACTGATGACAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATATGGCAAGCAAGTAAGCAAGCATGGCACACAAACTGATGACAAT  938

seq1  GATAACTGGAATTCATCTTCTTAGGATAGGGCCTCAAGTACCCCGGTCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTGGAATTCATCTTCTTAGGATAGGGCCTCAAGTACCCCGGTCTG  988

seq1  GCCTTGAGGTCATTGTACAGCCAAAGATGGCCTTGAGCAGATCCTTCTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAGGTCATTGTACAGCCAAAGATGGCCTTGAGCAGATCCTTCTGT  1038

seq1  CACCATGTCTCAAGTACTGATTTTAAGTTCTAAGAGTAGAACCCAGGAAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGTCTCAAGTACTGATTTTAAGTTCTAAGAGTAGAACCCAGGAAC  1088

seq1  CTAGGACCTTATGTTTGCTAGGTAAGTGTTCTCCTCACTGAGCTGTATAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACCTTATGTTTGCTAGGTAAGTGTTCTCCTCACTGAGCTGTATAG  1138

seq1  TCAGCTCCTATTGGAACACATTTTTAGAAGGATAGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCTATTGGAACACATTTTTAGAAGGATAGAATTC  1178


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