BAC Information

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BAC

Clone NameB6Ng01-090M18
Chromosome8 (Build37)
Map Location 10,801,117 - 10,948,281
singlet/doubletdoublet
Overlap geneLOC384782, LOC100040507, LOC665306
Upstream geneLig4, Abhd13, Tnfsf13b, Myo16, LOC100040008
Downstream geneIrs2, Col4a1, Col4a2, Rab20, 0710008K08Rik, Cars2, Ing1, Ankrd10, 1700016D06Rik, EG665271, LOC665363, LOC624710, LOC665373, Arhgef7, 1700018L24Rik, LOC100040155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090M18.bB6Ng01-090M18.g
ACCDH903003DH903004
length1,056482
definitionDH903003|Mus musculus domesticus DNA, BAC clone: B6Ng01-090M18, 5' end.DH903004|Mus musculus domesticus DNA, BAC clone: B6Ng01-090M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,947,215 - 10,948,281)(10,801,117 - 10,801,608)
sequence
gaattctttgttaagtgaaacaagattgtgtacggaggttaaaaggggaa
gatggcacggcgggtctctgtttagtatggttagtgtcagtggagatgaa
tgcacttgtggaagaaattactaagaagacataagaaacaggagagagag
gtcctgcctggtgggacatacctttaatcccagcactggggaaaaggggg
caggggcaggggcaggtggatgtctgagttcaaggccagttcagtcaaca
tagagtgttccagcacagtcaggatatacagagaggccctgcctggagag
aaagcaacaaaacagaaagaaacaaaacaaagcaaaaccaaaaaaacaac
caaccaaccaatacaaagaaaacagcagagaatctgaaggtacaaaggtc
atggaagatatcacagtaaagttaagacggagccagtgcttgctgctggt
ggagacagttgcttaacagtcagaccactgagtcaagcaggctggctggt
gacttgtttggagcctcatgtttctgcctttctcacagaggtaatgtaat
cccccaacttcttctttgtaacttattttattttactttattattttcgt
ttttctagacctggtttctcccatgtagccttggctgtcatggaactcac
gctgaagaccaggctgtcctcaaacttatctgcctgcccctgcctcctgc
gtgctggtattaatttaattgataatccttgtttaaaacaaaaagagttg
ggaggcagagacagtcggatttctgagttagaggccagcctggtccacaa
agtgagttccaggacagccagggctatgcagagaaaccctgtctcgaaaa
acaaacaaacaaacaaaccccccaaaaaaccaaccaaccaaccaaccaaa
gacaaaaagagagggcggagcatctctctttgcactgaggctcgatgttt
acattcttaagtttatgtcttagaataaacccccttccccctcagatccc
ctctactgcacagctgcttcagctgatgagtactagttgtttagctgcta
ttgttt
taggggacctttcatagagtatataaatggtaagcctctgagagagaggt
ggtgggttggtggttgttgttaggaggttgttgtttggcggctgttggtt
gtggattgttaagtagtcgtgcacaaagaaacaacaagaagaaattagat
atcctgatggtgacgatcaaacttgtcccaaggaactccatgtcccaatc
agcaggaagtagtctaacaataacaggatctctttcctttcctatctttc
cttttttctctcctatccagtctcagaggggctaaagggtagaataaaag
gggtggagaggggtggaagaaagaagaacccacagcgtagcaaagacatc
taaatgcttcccttgggggtgctcctatcctctgacttcattttctgtct
gcttggaacatgccctttttccctctctttaggccatactctcccttcct
atcagtgctgcgtttttttagttgcatttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_10947215_10948281
seq2: B6Ng01-090M18.b_48_1103 (reverse)

seq1  AAACAATAGCAGCTAAACAACTAAGTAACCTCATTCAGCTGAAGCCAGCT  50
      |||||||||||||||||||||| ||||  |||| |||||||||| |||||
seq2  AAACAATAGCAGCTAAACAACT-AGTA--CTCA-TCAGCTGAAG-CAGCT  45

seq1  GTGCAGTAGAAGGGGATCTGGAGGGGGAGGGGGTTTATTCTTAAGACATA  100
      ||||||||| ||||||||||  |||| ||||||||||||| |||||||||
seq2  GTGCAGTAG-AGGGGATCTGAGGGGGAAGGGGGTTTATTC-TAAGACATA  93

seq1  AACTTAAGAATGTAAAACATCGAGCCTCAGTGCAAAGAGAGATGCTCCGC  150
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AACTTAAGAATGT-AAACATCGAGCCTCAGTGCAAAGAGAGATGCTCCGC  142

seq1  CCTCTCTTTTTTGTCTTTTGGTTGGTTGGTTGGTTGGTTTTTTTGGGGGG  200
      |||||| |||||||| ||||||||||||||||||||| ||||||||||||
seq2  CCTCTC-TTTTTGTC-TTTGGTTGGTTGGTTGGTTGG-TTTTTTGGGGGG  189

seq1  TTTGTTTGTTTGTTTGTTTTTCGAGACAGGGTTTCTCTGCATAGCCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTGTTTTTCGAGACAGGGTTTCTCTGCATAGCCCTGG  239

seq1  CTGTCCTGGAACTCACTTTGTGGACCAGGCTGGCCTCTAACTCAGAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAACTCACTTTGTGGACCAGGCTGGCCTCTAACTCAGAAATC  289

seq1  CGACTGTCTCTGCCTCCCAACTCTTTTTGTTTTAAACAAGGATTATCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTGTCTCTGCCTCCCAACTCTTTTTGTTTTAAACAAGGATTATCAAT  339

seq1  TAAATTAATACCAGCACGCAGGAGGCAGGGGCAGGCAGATAAGTTTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAATACCAGCACGCAGGAGGCAGGGGCAGGCAGATAAGTTTGAGG  389

seq1  ACAGCCTGGTCTTCAGCGTGAGTTCCATGACAGCCAAGGCTACATGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTGGTCTTCAGCGTGAGTTCCATGACAGCCAAGGCTACATGGGAG  439

seq1  AAACCAGGTCTAGAAAAACGAAAATAATAAAGTAAAATAAAATAAGTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGGTCTAGAAAAACGAAAATAATAAAGTAAAATAAAATAAGTTAC  489

seq1  AAAGAAGAAGTTGGGGGATTACATTACCTCTGTGAGAAAGGCAGAAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAAGTTGGGGGATTACATTACCTCTGTGAGAAAGGCAGAAACAT  539

seq1  GAGGCTCCAAACAAGTCACCAGCCAGCCTGCTTGACTCAGTGGTCTGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCCAAACAAGTCACCAGCCAGCCTGCTTGACTCAGTGGTCTGACT  589

seq1  GTTAAGCAACTGTCTCCACCAGCAGCAAGCACTGGCTCCGTCTTAACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCAACTGTCTCCACCAGCAGCAAGCACTGGCTCCGTCTTAACTTT  639

seq1  ACTGTGATATCTTCCATGACCTTTGTACCTTCAGATTCTCTGCTGTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATATCTTCCATGACCTTTGTACCTTCAGATTCTCTGCTGTTTTC  689

seq1  TTTGTATTGGTTGGTTGGTTGTTTTTTTGGTTTTGCTTTGTTTTGTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTGGTTGGTTGGTTGTTTTTTTGGTTTTGCTTTGTTTTGTTTCT  739

seq1  TTCTGTTTTGTTGCTTTCTCTCCAGGCAGGGCCTCTCTGTATATCCTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTGTTGCTTTCTCTCCAGGCAGGGCCTCTCTGTATATCCTGAC  789

seq1  TGTGCTGGAACACTCTATGTTGACTGAACTGGCCTTGAACTCAGACATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGGAACACTCTATGTTGACTGAACTGGCCTTGAACTCAGACATCC  839

seq1  ACCTGCCCCTGCCCCTGCCCCCTTTTCCCCAGTGCTGGGATTAAAGGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCCCTGCCCCTGCCCCCTTTTCCCCAGTGCTGGGATTAAAGGTAT  889

seq1  GTCCCACCAGGCAGGACCTCTCTCTCCTGTTTCTTATGTCTTCTTAGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCACCAGGCAGGACCTCTCTCTCCTGTTTCTTATGTCTTCTTAGTAA  939

seq1  TTTCTTCCACAAGTGCATTCATCTCCACTGACACTAACCATACTAAACAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCACAAGTGCATTCATCTCCACTGACACTAACCATACTAAACAG  989

seq1  AGACCCGCCGTGCCATCTTCCCCTTTTAACCTCCGTACACAATCTTGTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCGCCGTGCCATCTTCCCCTTTTAACCTCCGTACACAATCTTGTTT  1039

seq1  CACTTAACAAAGAATTC  1067
      |||||||||||||||||
seq2  CACTTAACAAAGAATTC  1056

seq1: chr8_10801117_10801608
seq2: B6Ng01-090M18.g_70_557

seq1  GAATTCTAGGGGACCTTTCATAGAGTATATAAATGGTAAGCCTCTGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGGACCTTTCATAGAGTATATAAATGGTAAGCCTCTGAGAG  50

seq1  AGAGGTGGTGGGTTGGTGGTTGTTGTTAGGAGGTTGTTGTTTGGCGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGGTGGGTTGGTGGTTGTTGTTAGGAGGTTGTTGTTTGGCGGCTG  100

seq1  TTGGTTGTGGATTGTTAAGTAGTCGTGCACAAAGAAACAACAAGAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGTGGATTGTTAAGTAGTCGTGCACAAAGAAACAACAAGAAGAAA  150

seq1  TTAGATATCCTGATGGTGACGATCAAACTTGTCCCAAGGAACTCCATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATCCTGATGGTGACGATCAAACTTGTCCCAAGGAACTCCATGTC  200

seq1  CCAATCAGCAGGAAGTAGTCTAACAATAACAGGATCTCTTTCCTTTCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCAGCAGGAAGTAGTCTAACAATAACAGGATCTCTTTCCTTTCCTA  250

seq1  TCTTTCCTTTTTTCTCTCCTATCCAGTCTCAGAGGGGCTAAAGGGTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTTTTTTCTCTCCTATCCAGTCTCAGAGGGGCTAAAGGGTAGAA  300

seq1  GAAAAGGGGTGGAGAGGGGTGGAAGAAAGAAGAACCCACAGCGTAGCAAA  350
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGGGTGGAGAGGGGTGGAAGAAAGAAGAACCCACAGCGTAGCAAA  350

seq1  GACATCTAAATGCTTCCCTTGGGGGTGCTCCTAGCCTCTGACTTCATTTT  400
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GACATCTAAATGCTTCCCTTGGGGGTGCTCCTATCCTCTGACTTCATTTT  400

seq1  CTGTCTGCTTGGAACAGGCCCCGTCTTCCCTCAGCTTTTAGGCCATACTC  450
      |||||||||||||||| | ||| | |||||||    ||||||||||||||
seq2  CTGTCTGCTTGGAACATG-CCCTTTTTCCCTC--TCTTTAGGCCATACTC  447

seq1  TCCCTTCCTACCAGTGCTGCGTTATTTTTAGTTGCATTTGTG  492
      |||||||||| |||||||||||| ||||||||||||||||||
seq2  TCCCTTCCTATCAGTGCTGCGTT-TTTTTAGTTGCATTTGTG  488