BAC Information

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BAC

Clone NameB6Ng01-091E22
Chromosome8 (Build37)
Map Location 40,868,335 - 41,025,947
singlet/doubletdoublet
Overlap geneLOC666959
Upstream geneTusc3, LOC100038974, LOC632066, EG621335, LOC434304, Msr1, EG621431, LOC100039072
Downstream geneEG632166, Fgf20, 2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091E22.bB6Ng01-091E22.g
ACCDH903366DH903367
length1,0931,090
definitionDH903366|Mus musculus domesticus DNA, BAC clone: B6Ng01-091E22, 5' end.DH903367|Mus musculus domesticus DNA, BAC clone: B6Ng01-091E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,024,838 - 41,025,947)(40,868,335 - 40,869,420)
sequence
gaattcctggtaaggagacttggtgaagacgtctcttttcagaggtcaga
ggtgagggaactgcaagtcttggagatggcatcaaaggtggccttggcaa
agttgcccagggtggcagtgcagcctctggctgatgtatagcagacatct
atacctgccatccatcgtcagtagcatcttggacacaggggcagagacaa
tgccagtgcctctgggggcagggatgaactgcaccggcacagagccaccg
cagcctgtcaccttgcatggaaaagtgttcggcttgccaatcttgttccc
ccagtagcctctctgcacagggatgatgaaaagcttggtcaagatgatgg
cctcttggatggcagtagcaacttcctaggaacacttaacaccaagacca
agtgaccactgtagtccccaaaagactcgaacctggtctgctggccagcc
cgcatctgcttctgcacgggcatgattttctgaacctcatcctttaggca
tgcacccaggaaaaagtcaataatctcagactccccccgcccccactttt
ttttttttttggcttgaggggtatgatagtttatttaaaaaacagaaaca
acaaaaccaaacaacaacagtaacaaataaaactaccacactgatcatgg
tgaccaacatacacataatggcttctctcttgggtattaacactacagta
tgtttagatactgaaatgtttaaataggaccaagaacgttagagaataag
gatcttggatgaaaatggaaacttgtaagtctggtgtattaacccacaga
attcatttaaagccgcatgaatccgtgagattatgctatgtaatggttag
ggaagacaaaagctatctcaggaggaggcagcataaactttataattctt
tgtactttaatttttagtttatgatttaagttatgtccactctggctaaa
gcacatcagacagacacttaggtgaaatccttgctactattgcacaaatt
tagtatttattaaaggaaaatattaaacatcatcaacaagaggcaataaa
atgtgacatccatcatttgaaacgcaagaagctgcttctcaat
gaattctttagtttcctttttagttatttattctgaaatttttctcctgt
agggttatgtctcactcattaatagttttaactcccctttaaataagtat
tttatgacccaaactgattttccctttcctgccttccactatcttattta
ataacttcttgttttttgagaaatatagttggattattaccataaatata
atcaagtcttttgctcctaaatttgtaccttgactaatatattggggatc
ttaaggtagtacctataagagaacaggttttatagtgcatgccttatata
gtttttagtttagctgtcataaaacaaagaatatttacatgttatgcata
tgtatgcatatatgcatgtatacacatctattctttcctatattcttatc
acatatgaacatataagcctctgtataacatatatattatataaatatgt
atatatgctgttaagatgtatgatgtctttatctgaacaaatacatttat
ataatactttgatatatttttttctcaaaatctgctcatcaatttgacat
gtttgacatggttcaagtgggaaatgttctgttttagaagaaaaaaggta
attactaaaatgtctgcaggtcccacgctcagttgcaggcctggaaaaca
tgtgtgggtgtgcattttgtggattgttctttgactaaaagactgggatt
acataaagttaaaatatttttttcatttttttaaatattttttattacat
attttcctcaattacatatccaatgctatcccaaaagtcccccataaccc
cccacacttccctacccgcccattcccatttttttggccctggcgttccc
ctgtactggggcatatacagtttgcgtgtccaatgggcctttctttccag
tgatggccgactaggccatctttgctcatttgttttattatattggaaac
aggctggccttgaattcccagtaatctagctgcttctgcctctcaaatgc
taggataaagttatgtgtcactgtataaaactagagaataaggcttgtta
gctggggaataactatattatacgacaagagcaaacacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_41024838_41025947
seq2: B6Ng01-091E22.b_49_1141 (reverse)

seq1  ATTGAAGAAGCAAGCTCTCTGCGTTTCAAATGATTTGAATGTCACATTTT  50
      |||| |||||| ||||   ||||||||||||||  || ||||||||||||
seq2  ATTG-AGAAGC-AGCTTCTTGCGTTTCAAATGA--TGGATGTCACATTTT  46

seq1  ATTTGCCTCTTTGTTTTGATGGTGGTTTAATTATTTTTCCTTTTAATAAA  100
      | ||||||||   | |||||| | |||||| ||||||  | |||||||||
seq2  A-TTGCCTCT---TGTTGATGAT-GTTTAA-TATTTT--CCTTTAATAAA  88

seq1  ATTACTAAATTTGTGCAATAGTAGCAAGGATTTCACCTAAGGTGTCTTGT  150
        |||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  --TACTAAATTTGTGCAATAGTAGCAAGGATTTCACCTAA-GTGTC-TGT  134

seq1  CTGATTGTGCTTTAGCCAGAGTGGACATAACTTAAATCATAAACTAAAAA  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGA-TGTGCTTTAGCCAGAGTGGACATAACTTAAATCATAAACTAAAAA  183

seq1  TTAAAGTACAAAGAATTATAAAGTTTATGCTGCCTCCTCCTGAGATAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTACAAAGAATTATAAAGTTTATGCTGCCTCCTCCTGAGATAGCT  233

seq1  TTTGTCTTCCCTAACCATTACATAGCATAATCTCACGGATTCATGCGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTCCCTAACCATTACATAGCATAATCTCACGGATTCATGCGGCT  283

seq1  TTAAATGAATTCTGTGGGTTAATACACCAGACTTACAAGTTTCCATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAATTCTGTGGGTTAATACACCAGACTTACAAGTTTCCATTTTC  333

seq1  ATCCAAGATCCTTATTCTCTAACGTTCTTGGTCCTATTTAAACATTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGATCCTTATTCTCTAACGTTCTTGGTCCTATTTAAACATTTCAG  383

seq1  TATCTAAACATACTGTAGTGTTAATACCCAAGAGAGAAGCCATTATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAACATACTGTAGTGTTAATACCCAAGAGAGAAGCCATTATGTGT  433

seq1  ATGTTGGTCACCATGATCAGTGTGGTAGTTTTATTTGTTACTGTTGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGTCACCATGATCAGTGTGGTAGTTTTATTTGTTACTGTTGTTGT  483

seq1  TTGGTTTTGTTGTTTCTGTTTTTTAAATAAACTATCATACCCCTCAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTGTTGTTTCTGTTTTTTAAATAAACTATCATACCCCTCAAGCC  533

seq1  AAAAAAAAAAAAAAGTGGGGGCGGGGGGAGTCTGAGATTATTGACTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAGTGGGGGCGGGGGGAGTCTGAGATTATTGACTTTTT  583

seq1  CCTGGGTGCATGCCTAAAGGATGAGGTTCAGAAAATCATGCCCGTGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGCATGCCTAAAGGATGAGGTTCAGAAAATCATGCCCGTGCAGA  633

seq1  AGCAGATGCGGGCTGGCCAGCAGACCAGGTTCGAGTCTTTTGGGGACTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATGCGGGCTGGCCAGCAGACCAGGTTCGAGTCTTTTGGGGACTAC  683

seq1  AGTGGTCACTTGGTCTTGGTGTTAAGTGTTCCTAGGAAGTTGCTACTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCACTTGGTCTTGGTGTTAAGTGTTCCTAGGAAGTTGCTACTGCC  733

seq1  ATCCAAGAGGCCATCATCTTGACCAAGCTTTTCATCATCCCTGTGCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGAGGCCATCATCTTGACCAAGCTTTTCATCATCCCTGTGCAGAG  783

seq1  AGGCTACTGGGGGAACAAGATTGGCAAGCCGAACACTTTTCCATGCAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTACTGGGGGAACAAGATTGGCAAGCCGAACACTTTTCCATGCAAGG  833

seq1  TGACAGGCTGCGGTGGCTCTGTGCCGGTGCAGTTCATCCCTGCCCCCAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGCTGCGGTGGCTCTGTGCCGGTGCAGTTCATCCCTGCCCCCAGA  883

seq1  GGCACTGGCATTGTCTCTGCCCCTGTGTCCAAGATGCTACTGACGATGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGGCATTGTCTCTGCCCCTGTGTCCAAGATGCTACTGACGATGGA  933

seq1  TGGCAGGTATAGATGTCTGCTATACATCAGCCAGAGGCTGCACTGCCACC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGTATAGATGTCTGCTATACATCAGCCAGAGGCTGCACTGCCACC  983

seq1  CTGGGCAACTTTGCCAAGGCCACCTTTGATGCCATCTCCAAGACTTGCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAACTTTGCCAAGGCCACCTTTGATGCCATCTCCAAGACTTGCAG  1033

seq1  TTCCCTCACCTCTGACCTCTGAAAAGAGACGTCTTCACCAAGTCTCCTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCACCTCTGACCTCTGAAAAGAGACGTCTTCACCAAGTCTCCTTA  1083

seq1  CCAGGAATTC  1110
      ||||||||||
seq2  CCAGGAATTC  1093

seq1: chr8_40868335_40869420
seq2: B6Ng01-091E22.g_67_1156

seq1  GAATTCTTTAGTTTCCTTTTTAGTTATTTATTCTGAAATTTTTCTCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGTTTCCTTTTTAGTTATTTATTCTGAAATTTTTCTCCTGT  50

seq1  AGGGTTATGTCTCACTCATTAATAGTTTTAACTCCCCTTTAAATAAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTATGTCTCACTCATTAATAGTTTTAACTCCCCTTTAAATAAGTAT  100

seq1  TTTATGACCCAAACTGATTTTCCCTTTCCTGCCTTCCACTATCTTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGACCCAAACTGATTTTCCCTTTCCTGCCTTCCACTATCTTATTTA  150

seq1  ATAACTTCTTGTTTTTTGAGAAATATAGTTGGATTATTACCATAAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTCTTGTTTTTTGAGAAATATAGTTGGATTATTACCATAAATATA  200

seq1  ATCAAGTCTTTTGCTCCTAAATTTGTACCTTGACTAATATATTGGGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTCTTTTGCTCCTAAATTTGTACCTTGACTAATATATTGGGGATC  250

seq1  TTAAGGTAGTACCTATAAGAGAACAGGTTTTATAGTGCATGCCTTATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTAGTACCTATAAGAGAACAGGTTTTATAGTGCATGCCTTATATA  300

seq1  GTTTTTAGTTTAGCTGTCATAAAACAAAGAATATTTACATGTTATGCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAGTTTAGCTGTCATAAAACAAAGAATATTTACATGTTATGCATA  350

seq1  TGTATGCATATATGCATGTATACACATCTATTCTTTCCTATATTCTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCATATATGCATGTATACACATCTATTCTTTCCTATATTCTTATC  400

seq1  ACATATGAACATATAAGCCTCTGTATAACATATATATTATATAAATATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGAACATATAAGCCTCTGTATAACATATATATTATATAAATATGT  450

seq1  ATATATGCTGTTAAGATGTATGATGTCTTTATCTGAACAAATACATTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCTGTTAAGATGTATGATGTCTTTATCTGAACAAATACATTTAT  500

seq1  ATAATACTTTGATATATTTTTTTCTCAAAATCTGCTCATCAATTTGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACTTTGATATATTTTTTTCTCAAAATCTGCTCATCAATTTGACAT  550

seq1  GTTTGACATGGTTCAAGTGGGAAATGTTCTGTTTTAGAAGAAAAAAGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACATGGTTCAAGTGGGAAATGTTCTGTTTTAGAAGAAAAAAGGTA  600

seq1  ATTACTAAAATGTCTGCAGGTCCCACGCTCAGTTGCAGGCCTGGAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAAAATGTCTGCAGGTCCCACGCTCAGTTGCAGGCCTGGAAAACA  650

seq1  TGTGTGGGTGTGCATTTTGTGGATTGTTCTTTGACTAAAAGACTGGGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGTGTGCATTTTGTGGATTGTTCTTTGACTAAAAGACTGGGATT  700

seq1  ACATAAAGTTAAAATATTTTTTTCATTTTTTTAAATATTTTTTATTACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGTTAAAATATTTTTTTCATTTTTTTAAATATTTTTTATTACAT  750

seq1  ATTTTCCTCAATTACATATCCAATGCTATCCCAAAAGTCCCCCATAACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTCAATTACATATCCAATGCTATCCCAAAAGTCCCCCATAACCC  800

seq1  CCCACACTTCCCTACCCGCCCATTCCCATTTTTTTGGCCCTGGCGTTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTTCCCTACCCGCCCATTCCCATTTTTTTGGCCCTGGCGTTCCC  850

seq1  CTGTACTGGGGCATATACAGTTTGCGTGTCCAATGGGCCTTTCTTTCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGGGGCATATACAGTTTGCGTGTCCAATGGGCCTTTCTTTCCAG  900

seq1  TGATGGCCGACTAGGCCATCTTTGCTCATTTGTTTTTATTATATTGGAAA  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGATGGCCGACTAGGCCATCTTTGCTCATTTG-TTTTATTATATTGGAAA  949

seq1  CAGGGCTGGCCTTGAATTCCCAGTAATCTAGCTGCTTCTGCCTCTCAAAT  1000
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GGCTGGCCTTGAATTCCCAGTAATCTAGCTGCTTCTGCCTCTCAAAT  998

seq1  GCTAGGATTAAAGTTATGTGTCACTGTATAAAACTAAGAGAATAAGGCTT  1050
      ||||||| ||||||||||||||||||||||||||| ||||||||||||||
seq2  GCTAGGA-TAAAGTTATGTGTCACTGTATAAAACT-AGAGAATAAGGCTT  1046

seq1  G-TAGCTTGGGGAATAACTATAT--------AATAACAAACACAG  1086
      | |||| ||||||||||||||||        || | |||||||||
seq2  GTTAGC-TGGGGAATAACTATATTATACGACAAGAGCAAACACAG  1090