BAC Information

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BAC

Clone NameB6Ng01-091G24
Chromosome8 (Build37)
Map Location 103,982,876 - 104,100,690
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091G24.bB6Ng01-091G24.g
ACCDH903462DH903463
length1,1251,045
definitionDH903462|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G24, 5' end.DH903463|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,099,555 - 104,100,690)(103,982,876 - 103,983,589)
sequence
gaattcactaatcctctttttatgtttacttggaataggagagttttcca
cctatatatccaatagaggattagtattcagcagataaaaagaagctttt
taccaaacaatgaatcccaaaacaacaacaaaggaagaatccacaaaaaa
atgtggtatatctcaacaaataattctcaaaataggaaattaaattatct
aaggggcatttttaaaaatgttcatcatccttattaataacaaaaaatga
aaataaaaaaatgtaagaatacagagactcagtgtttacacatatatgtg
tatgcattattatatattttgtggaatatatatgtaacaatattgattaa
agaggatgcaataagtttgagtaaagagaaacattgaaaagatgagaaga
aggaatgaatcaatgcatagttctcatatgggaaactttcaaaatactat
aaatacatttaaaagaaaataaaagaactgataataacaatgtcatcaag
attattgtaacagggtaattaaacattgtctaatatttgtggagatgcaa
aatttggaaatcagtgtggagtggcctcaaaaagataaaaatgctccttg
acattgggaaatgactctttggtatggacttaaagccatacttatttctt
ctctatttataaatttttgggaacagcactacggatgcctattaactgaa
aaaatgataatgataaactgatataggtgtatgcttgaattttataaggc
tataagaaaaaaaatggaatcctggaattcacagataagtgaataggact
ttaaattatttgttgatccttaggtttatacaaccaggagtaactataga
agtcacaaaattaaaaaggtcaccaagggaggagggacaaagaagatcat
tagagaggaggatagcaaggtatcagtgcattcaagagggagttgttgag
tgcttgactaacaagaaggaaaaaagtaatccagtatgaagaggagggag
gaaaaataaatatattcagaatcattgtgaaacctttatacataacctac
taatatacttactcatatacaaaaaaatgagtattctattgcagtaaatt
ggggtgggttgactaggagtaatta
gaattcactttgattgaattttaggaagtctatttttttattcattaatt
tctttatttctgtcttgacccagttgtccttcggtcaagagtagacttgt
agagttttcgggagtttgtagggtttcttttgtttttgtgttggaaatcc
accttcaatcagtggtattcagatagaatatagggggtgactttaacttt
cttgtatcttctgagacatgcacggtctccaagtaggtggccaattttgg
acaaagatccacaagtttctgagaagaagggatattaatttgtgtttggg
tgaaatgtttggtagacatatgttaggtccatttgagtcataatattttg
ggtcgatcatttctctgtttggattttgtctgtatgatttggacagtggt
gagactagagtattgaaatttccctgttttaatgtgtggggttcaatgca
tgatttaagttatagtaatgtttcttttacaaatatgggtaccctggcat
ttggggcataaatattcatgattaagatatcatctttgtgggtttttctt
ggatgagtatgaaatagcttttcctttttttaaattaattttagttggaa
gtttattttattcaatgttagaatatctacactagcctacttcttggatc
catttgcttgggatttttttcaaacatttactctgaggtaatatctatct
tgatgttgaggtatgttcctggtatgcagcagagggtggattttgtttcc
tcattcatccttttaatctttgacatattattagaaattggtccaataat
attgagagattttaatgagtggtgcctgggcagcctgtgtgacctctgtg
gttttggttgtcagcattgcttctggtttctgagaggtgacatgacctta
gtttcagagaatggtgtgtttgtggtacagtaggggagcttctagggttc
tgcatactgtcgtagactgtgaagttctggatacaccacatggaactctg
ggcttctaagaacttgcatggatctagtgttctagtactgatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104099555_104100690
seq2: B6Ng01-091G24.b_48_1172 (reverse)

seq1  TAATTACTCCTATGTCACACCACCC--AATTACTGCCAATAGAATACTCA  48
      |||||||||||| ||||  ||||||  | |||||| ||||||||||||||
seq2  TAATTACTCCTA-GTCAACCCACCCCAATTTACTG-CAATAGAATACTCA  48

seq1  TTTTTTTTGTAATATGAGTAAGTATATTTAAGTAAGTTTATGTAATAAAG  98
       ||||||||| |||||||||||||||||  ||| || |||||| ||||||
seq2  -TTTTTTTGT-ATATGAGTAAGTATATT--AGT-AGGTTATGT-ATAAAG  92

seq1  GTTTTCACAATGATTCTTGATATTATTTATTTTTCCTCCCTCCTCTTCAT  148
      | |||||||||||||||  ||| |||||||||||||||||||||||||||
seq2  G-TTTCACAATGATTCTGAATA-TATTTATTTTTCCTCCCTCCTCTTCAT  140

seq1  ACTGGATTACCTTTTTTCCTTCTTGTTAGTCAAGCACCTCAACAACTCCC  198
      ||||||||| |||||||||||||||||||||||||| |||||||||||||
seq2  ACTGGATTA-CTTTTTTCCTTCTTGTTAGTCAAGCA-CTCAACAACTCCC  188

seq1  TCTTGAATGCACTGATACCTTGCTATCCTCCTCTCTAATGATCCTTCTTT  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTTGAATGCACTGATACCTTGCTATCCTCCTCTCTAATGAT-CTTCTTT  237

seq1  GTCCCTCCTCCCTTGGTGACCTTTTTAATTTTGTGACTTCTATAGTTACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCCTCCCTTGGTGACCTTTTTAATTTTGTGACTTCTATAGTTACT  287

seq1  CCTGGTTGTATAAACCTAAGGATCAACAAATAATTTAAAGTCCTATTCAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTGTATAAACCTAAGGATCAACAAATAATTTAAAGTCCTATTCAC  337

seq1  TTATCTGTGAATTCCAGGATTCCATTTTTTTTCTTATAGCCTTATAAAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTGAATTCCAGGATTCCATTTTTTTTCTTATAGCCTTATAAAAT  387

seq1  TCAAGCATACACCTATATCAGTTTATCATTATCATTTTTTCAGTTAATAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCATACACCTATATCAGTTTATCATTATCATTTTTTCAGTTAATAG  437

seq1  GCATCCGTAGTGCTGTTCCCAAAAATTTATAAATAGAGAAGAAATAAGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCGTAGTGCTGTTCCCAAAAATTTATAAATAGAGAAGAAATAAGTA  487

seq1  TGGCTTTAAGTCCATACCAAAGAGTCATTTCCCAATGTCAAGGAGCATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTAAGTCCATACCAAAGAGTCATTTCCCAATGTCAAGGAGCATTT  537

seq1  TTATCTTTTTGAGGCCACTCCACACTGATTTCCAAATTTTGCATCTCCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTTTGAGGCCACTCCACACTGATTTCCAAATTTTGCATCTCCAC  587

seq1  AAATATTAGACAATGTTTAATTACCCTGTTACAATAATCTTGATGACATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAGACAATGTTTAATTACCCTGTTACAATAATCTTGATGACATT  637

seq1  GTTATTATCAGTTCTTTTATTTTCTTTTAAATGTATTTATAGTATTTTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTATCAGTTCTTTTATTTTCTTTTAAATGTATTTATAGTATTTTGA  687

seq1  AAGTTTCCCATATGAGAACTATGCATTGATTCATTCCTTCTTCTCATCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCCATATGAGAACTATGCATTGATTCATTCCTTCTTCTCATCTT  737

seq1  TTCAATGTTTCTCTTTACTCAAACTTATTGCATCCTCTTTAATCAATATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTTTCTCTTTACTCAAACTTATTGCATCCTCTTTAATCAATATT  787

seq1  GTTACATATATATTCCACAAAATATATAATAATGCATACACATATATGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATATATATTCCACAAAATATATAATAATGCATACACATATATGTG  837

seq1  TAAACACTGAGTCTCTGTATTCTTACATTTTTTTATTTTCATTTTTTGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACTGAGTCTCTGTATTCTTACATTTTTTTATTTTCATTTTTTGTT  887

seq1  ATTAATAAGGATGATGAACATTTTTAAAAATGCCCCTTAGATAATTTAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAAGGATGATGAACATTTTTAAAAATGCCCCTTAGATAATTTAAT  937

seq1  TTCCTATTTTGAGAATTATTTGTTGAGATATACCACATTTTTTTGTGGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATTTTGAGAATTATTTGTTGAGATATACCACATTTTTTTGTGGAT  987

seq1  TCTTCCTTTGTTGTTGTTTTGGGATTCATTGTTTGGTAAAAAGCTTCTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTGTTGTTGTTTTGGGATTCATTGTTTGGTAAAAAGCTTCTTT  1037

seq1  TTATCTGCTGAATACTAATCCTCTATTGGATATATAGGTGGAAAACTCTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGCTGAATACTAATCCTCTATTGGATATATAGGTGGAAAACTCTC  1087

seq1  CTATTCCAAGTAAACATAAAAAGAGGATTAGTGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCAAGTAAACATAAAAAGAGGATTAGTGAATTC  1125

seq1: chr8_103982876_103983589
seq2: B6Ng01-091G24.g_395_1110

seq1  CATTTGAGTCATAATATTTTGGGTCGATCATTTCTCTGTTTGGATTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAGTCATAATATTTTGGGTCGATCATTTCTCTGTTTGGATTTTGT  50

seq1  CTGTATGATTTGGACAGTGGTGAGACTAGAGTATTGAAATTTCCCTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGATTTGGACAGTGGTGAGACTAGAGTATTGAAATTTCCCTGTTT  100

seq1  TAATGTGTGGGGTTCAATGCATGATTTAAGTTATAGTAATGTTTCTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGTGGGGTTCAATGCATGATTTAAGTTATAGTAATGTTTCTTTTA  150

seq1  CAAATATGGGTACCCTGGCATTTGGGGCATAAATATTCATGATTAAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATGGGTACCCTGGCATTTGGGGCATAAATATTCATGATTAAGATA  200

seq1  TCATCTTTGTGGGTTTTTCTTGGATGAGTATGAAATAGCTTTTCCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTGTGGGTTTTTCTTGGATGAGTATGAAATAGCTTTTCCTTTTT  250

seq1  TTAAATTAATTTTAGTTGGAAGTTTATTTTATTCAATGTTAGAATATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAATTTTAGTTGGAAGTTTATTTTATTCAATGTTAGAATATCTA  300

seq1  CACTAGCCTACTTCTTGGATCCATTTGCTTGGGATTTTTTTCAAACATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCCTACTTCTTGGATCCATTTGCTTGGGATTTTTTTCAAACATTT  350

seq1  ACTCTGAGGTAATATCTATCTTGATGTTGAGGTATGTTCCTGGTATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAGGTAATATCTATCTTGATGTTGAGGTATGTTCCTGGTATGCAG  400

seq1  CAGAGGGTGGATTTTGTTTCCTCATTCATCCTTTTAATCTTTGACATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGTGGATTTTGTTTCCTCATTCATCCTTTTAATCTTTGACATATT  450

seq1  ATTAGAAATTGGTCCAATAATATTGAGAGATTTTAATGAGTGGTGCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAATTGGTCCAATAATATTGAGAGATTTTAATGAGTGGTGCCTGG  500

seq1  GCAGCCTGTGTGACCTCTGTGGTTTTGGTTGTCAGCATTGCTTCTGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTGTGTGACCTCTGTGGTTTTGGTTGTCAGCATTGCTTCTGGTTT  550

seq1  CTGAGAGGTGACATGACCTTAGTTTCAGAGAATGGTGTGTTTGTGGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGGTGACATGACCTTAGTTTCAGAGAATGGTGTGTTTGTGGTACA  600

seq1  GTA-GGGAGCTTCTAGGGTTCTGCATACTGTCGTAGACTGTGAAGTTCTG  649
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGGAGCTTCTAGGGTTCTGCATACTGTCGTAGACTGTGAAGTTCTG  650

seq1  GATACA-CACATGG-ACCCTGGGCTTCTAAGAACCTGCATGGATTCTAGT  697
      |||||| ||||||| || |||||||||||||||| |||||||| ||||||
seq2  GATACACCACATGGAACTCTGGGCTTCTAAGAACTTGCATGGA-TCTAGT  699

seq1  GTTCTAGTACTGATATG  714
      |||||||||||||||||
seq2  GTTCTAGTACTGATATG  716