BAC Information

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BAC

Clone NameB6Ng01-092E05
Chromosome8 (Build37)
Map Location 15,360,215 - 15,501,980
singlet/doubletdoublet
Overlap geneEG234097
Upstream geneDlgap2, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2, EG665599
Downstream geneEG665619, LOC634008, Csmd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092E05.bB6Ng01-092E05.g
ACCDH904072DH904073
length1,1441,118
definitionDH904072|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E05, 5' end.DH904073|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,500,836 - 15,501,980)(15,360,215 - 15,361,339)
sequence
gaattcacagggacaattatgatgtaatatgacaactagaaacaagagtc
ccatacagtattctgtgagatagttggactcaatgaaaggcactgtgcct
tgtatcagaaggaatccattcatgtgcatcctgagctaccatcccactga
catcctagagcacactgtgtgagataaagaccttgtctgttgtgaagttg
ttgcttacccatcagttccttggtttactcatcatccttttggtctcaca
gtagtgtttccttgtactctctgattctgccaagtgtgctgggtccatct
tgaacctgccctgtcaatctcctctttctttgttctcaaccaatagttgc
tgcttccaaggccagcatttcttcagaacttcccttcctacttcctgcat
ccatgccttcaagagcctggccatttccaagaattcctatgagacagctg
agggatcacacagggcctagacctctggcaggggcttccctgctgggtaa
accaagtcagcctcctgcacagtaatcaacatcaacacttggaaatcagc
attgtccttctagtgttctgctctgcctcccttatatgacacccagaagc
atagcgtacctatttccctcttttcacagatcggaaaaatacctggcaag
tgaagtcctccgtggcagttttagtcggtttatccctgaagtccccagga
aacatgtgtctttagtggctgcacttgggcttatggttgagtaatgttga
catgctggcacatttttagcactgtcatgaatcacagggaagccgtgcct
caggctctgaaggagatcagtccccacagcctgggttctaacagagcact
gcttgtagtgtaccacaggacagaaggcagatgctagctagctttgtgct
ctctgccttcctcccattctgctttccctctcccttctaactctccctcc
aacccctctctcctttttctttctcctctatcactgtctaatattctagt
cagtttttttctatttcctgagaagcttagaaatgtttataaaattccat
tcagatgaatatgttattaaaaaactctccagttgcttggcatagttaca
agaaatccttttggcttttaccatcgcagagaaagaatctttac
gaattccctggactgatcagattcaaagacaaagaaagtagacacagaag
tggtggtaccaaaccaggaagagagggaaatggggtgactttgttagatg
actgcaaaggttcaatttggcaagatcaaaaatgggaaaacactgaactt
cgctggactgtcatttaagataagttttaatgcatatatggatatccata
aatatccaaatttatctacattatatcaacgttaaatatccaaacataaa
agaatatagaagatagatatagcagtgccttctgatatcctctggtatat
agtgtggtgctgaaagatgatgtgcaagccagaagctacctctagatgtg
acgccctaattgtcatccatagtccctctggtctgggtgccattaccaaa
ctaggacaatagtccctacctgtttgtcccataatgctatatgaagatca
aagaggattataatcacagagataaaagtcctgagtccttcacacataga
gccatcatagcatgtacacactctctctatctctttcagaattgtttcca
tccagagcaatagatcttcaagcatctgggcttaatttatgactgttttg
aggtgcttatctcggagaattggttgtaatctcataatttctttttacaa
ttgaaataatgaactcctgactccttttgtgtcttgctctcccggtgtgg
tgcttgccgcagatacccattcaatattttaaattactggggcttcagct
tctctcacataggcactgtgaagattaatgtctatttggccgtttaagtt
tgtgatatgatttgagtacctcctaagaaaagttttatataaacatctta
taatgatgagaatgataagaaagagaccaagccgtaataaagaaaaataa
atgagacaaggaagctattctttctccacagttcagtagaataaacaacc
atggcgatggcagtcagtggagtgctctatctggatctttaaaatgctat
gaggatcttcaccctccttcaagtagaaggagtaattatttgaatttttt
ggtgaaggattaacaggatagctccaaaaatgcaagcaagctgtttcgtt
tttgatgtcatgtgggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_15500836_15501980
seq2: B6Ng01-092E05.b_45_1188 (reverse)

seq1  GTAATGATTCTTTTCTTGCGATTGATAAAAGCCAAAAGGATTTCTTGTAA  50
      |||| ||||||||   ||||| || |||||||||||||||||||||||||
seq2  GTAAAGATTCTTTCTCTGCGA-TGGTAAAAGCCAAAAGGATTTCTTGTAA  49

seq1  CTATGCAAAGCAACTGGAGAGTTTTTATATAACATATTCATATGGATGGT  100
      |||||| |||||||||||||||||||  ||||||||||||| || |||| 
seq2  CTATGCCAAGCAACTGGAGAGTTTTTTAATAACATATTCATCTGAATGG-  98

seq1  ATTTTTATAAACATTTCTAAGGCTCTCAGGAAATAGAAAAAAACTGACTA  150
      | |||||||||||||||||||  |||||||||||||||||||||||||| 
seq2  AATTTTATAAACATTTCTAAGCTTCTCAGGAAATAGAAAAAAACTGACT-  147

seq1  AGAATATTGAGACAGTGATAGAGGAGAAAGAAAAAGGAGAGAGGGGTTGG  200
      |||||||| ||||||||||||||||||||||||||||||||||||||| |
seq2  AGAATATT-AGACAGTGATAGAGGAGAAAGAAAAAGGAGAGAGGGGTT-G  195

seq1  GAGGGAGAAGTTAGAAGGGAGAGGGAAAGCAGAATGGGAGGGAGGCAGAG  250
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  GAGGGAG-AGTTAGAAGGGAGAGGGAAAGCAGAATGGGAGGAAGGCAGAG  244

seq1  AGCACAAAGCTAGCTAGCATCTGCCTTCTGTCCTGTGGTACACTAC-AGC  299
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGCACAAAGCTAGCTAGCATCTGCCTTCTGTCCTGTGGTACACTACAAGC  294

seq1  AGTGCTCTGTTAGAA-CCAGGCTGTGGGGACTGATCT-CTTCAGAGCCTG  347
      ||||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  AGTGCTCTGTTAGAACCCAGGCTGTGGGGACTGATCTCCTTCAGAGCCTG  344

seq1  AGGCACGGCTTCCCTGTGATTCATGACAGTGCT-AAAATGTGCCAGCATG  396
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGGCACGGCTTCCCTGTGATTCATGACAGTGCTAAAAATGTGCCAGCATG  394

seq1  TCAACATTACTCAACCATAAGCCCAAGTGCAGCCACTAAAGACACATGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATTACTCAACCATAAGCCCAAGTGCAGCCACTAAAGACACATGTT  444

seq1  TCCTGGGGACTTCAGGGATAAACCGACTAAAACTGCCACGGAGGACTTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGACTTCAGGGATAAACCGACTAAAACTGCCACGGAGGACTTCA  494

seq1  CTTGCCAGGTATTTTTCCGATCTGTG-AAAGAGGGAAATAGGTACGCTAT  545
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTGCCAGGTATTTTTCCGATCTGTGAAAAGAGGGAAATAGGTACGCTAT  544

seq1  GCTTCTGGGTGTCATATAAGGGAGGCAGAGCAGAACACTAGAAGGACAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGGGTGTCATATAAGGGAGGCAGAGCAGAACACTAGAAGGACAAT  594

seq1  GCTGATTTCCAAGTGTTGATGTTGATTACTGTGCAGGAGGCTGACTTGGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTTCCAAGTGTTGATGTTGATTACTGTGCAGGAGGCTGACTTGGT  644

seq1  TTACCCAGCAGGGAAGCCCCTGCCAGAGGTCTAGGCCCTGTGTGATCCCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAGCAGGGAAGCCCCTGCCAGAGGTCTAGGCCCTGTGTGATCCCT  694

seq1  CAGCTGTCTCATAGGAATTCTTGGAAATGGCCAGGCTCTTGAAGGCATGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCTCATAGGAATTCTTGGAAATGGCCAGGCTCTTGAAGGCATGG  744

seq1  ATGCAGGAAGTAGGAAGGGAAGTTCTGAAGAAATGCTGGCCTTGGAAGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGAAGTAGGAAGGGAAGTTCTGAAGAAATGCTGGCCTTGGAAGCA  794

seq1  GCAACTATTGGTTGAGAACAAAGAAAGAGGAGATTGACAGGGCAGGTTCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTATTGGTTGAGAACAAAGAAAGAGGAGATTGACAGGGCAGGTTCA  844

seq1  AGATGGACCCAGCACACTTGGCAGAATCAGAGAGTACAAGGAAACACTAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGACCCAGCACACTTGGCAGAATCAGAGAGTACAAGGAAACACTAC  894

seq1  TGTGAGACCAAAAGGATGATGAGTAAACCAAGGAACTGATGGGTAAGCAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGACCAAAAGGATGATGAGTAAACCAAGGAACTGATGGGTAAGCAA  944

seq1  CAACTTCACAACAGACAAGGTCTTTATCTCACACAGTGTGCTCTAGGATG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCACAACAGACAAGGTCTTTATCTCACACAGTGTGCTCTAGGATG  994

seq1  TCAGTGGGATGGTAGCTCAGGATGCACATGAATGGATTCCTTCTGATACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGGATGGTAGCTCAGGATGCACATGAATGGATTCCTTCTGATACA  1044

seq1  AGGCACAGTGCCTTTCATTGAGTCCAACTATCTCACAGAATACTGTATGG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGTGCCTTTCATTGAGTCCAACTATCTCACAGAATACTGTATGG  1094

seq1  GACTCTTGTTTCTAGTTGTCATATTACATCATAATTGTCCCTGTGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTGTTTCTAGTTGTCATATTACATCATAATTGTCCCTGTGAATTC  1144

seq1: chr8_15360215_15361339
seq2: B6Ng01-092E05.g_69_1186

seq1  GAATTCCCTGGACTGATCAGATTCAAAGACAAAGAAAGTAGACACAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGGACTGATCAGATTCAAAGACAAAGAAAGTAGACACAGAAG  50

seq1  TGGTGGTACCAAACCAGGAAGAGAGGGAAATGGGGTGACTTTGTTAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTACCAAACCAGGAAGAGAGGGAAATGGGGTGACTTTGTTAGATG  100

seq1  ACTGCAAAGGTTCAATTTGGCAAGATCAAAAATGGGAAAACACTGAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAAGGTTCAATTTGGCAAGATCAAAAATGGGAAAACACTGAACTT  150

seq1  CGCTGGACTGTCATTTAAGATAAGTTTTAATGCATATATGGATATCCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGACTGTCATTTAAGATAAGTTTTAATGCATATATGGATATCCATA  200

seq1  AATATCCAAATTTATCTACATTATATCAACGTTAAATATCCAAACATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAAATTTATCTACATTATATCAACGTTAAATATCCAAACATAAA  250

seq1  AGAATATAGAAGATAGATATAGCAGTGCCTTCTGATATCCTCTGGTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAGAAGATAGATATAGCAGTGCCTTCTGATATCCTCTGGTATAT  300

seq1  AGTGTGGTGCTGAAAGATGATGTGCAAGCCAGAAGCTACCTCTAGATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGTGCTGAAAGATGATGTGCAAGCCAGAAGCTACCTCTAGATGTG  350

seq1  ACGCCCTAATTGTCATCCATAGTCCCTCTGGTCTGGGTGCCATTACCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCTAATTGTCATCCATAGTCCCTCTGGTCTGGGTGCCATTACCAAA  400

seq1  CTAGGACAATAGTCCCTACCTGTTTGTCCCATAATGCTATATGAAGATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACAATAGTCCCTACCTGTTTGTCCCATAATGCTATATGAAGATCA  450

seq1  AAGAGGATTATAATCACAGAGATAAAAGTCCTGAGTCCTTCACACATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGATTATAATCACAGAGATAAAAGTCCTGAGTCCTTCACACATAGA  500

seq1  GCCATCATAGCATGTACACACTCTCTCTATCTCTTTCAGAATTGTTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCATAGCATGTACACACTCTCTCTATCTCTTTCAGAATTGTTTCCA  550

seq1  TCCAGAGCAATAGATCTTCAAGCATCTGGGCTTAATTTATGACTGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGCAATAGATCTTCAAGCATCTGGGCTTAATTTATGACTGTTTTG  600

seq1  AGGTGCTTATCTCGGAGAATTGGTTGTAATCTCATAATTTCTTTTTACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCTTATCTCGGAGAATTGGTTGTAATCTCATAATTTCTTTTTACAA  650

seq1  TTGAAATAATGAACTCCTGACTCCTTTTGTGTCTTGCTCTCCCGGTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATAATGAACTCCTGACTCCTTTTGTGTCTTGCTCTCCCGGTGTGG  700

seq1  TGCTTGCCGCAGATACCCATTCAATATTTT-AATTACTGGGGCTTCAGCT  749
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGCTTGCCGCAGATACCCATTCAATATTTTAAATTACTGGGGCTTCAGCT  750

seq1  TCTCTCACATAGGCACTGTGAAGATTAATGTCTATTTGGCCGTTTAAGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACATAGGCACTGTGAAGATTAATGTCTATTTGGCCGTTTAAGTT  800

seq1  TGTGATATGATTTGAGTACCTCCTAGGAAAAGTTTTATATAAACATCTTA  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTGATATGATTTGAGTACCTCCTAAGAAAAGTTTTATATAAACATCTTA  850

seq1  TAATGATGAGAATGATAAGAAAGAGACCAAGCGGTAATAAAGAAAAATTA  899
      |||||||||||||||||||||||||||||||| |||||||||||||||  
seq2  TAATGATGAGAATGATAAGAAAGAGACCAAGCCGTAATAAAGAAAAAT--  898

seq1  AAATGAGACAAGGAAGCTATTCTTTCTCCACAGTTCAAGTAGAATAAACA  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAATGAGACAAGGAAGCTATTCTTTCTCCACAGTTC-AGTAGAATAAACA  947

seq1  ACCATGGCGATTGGCAGTTCAAGTGGAGTGCTCTATCTGGATCTTTAAAA  999
      |||||||||| |||||||   |||||||||||||||||||||||||||||
seq2  ACCATGGCGA-TGGCAGT--CAGTGGAGTGCTCTATCTGGATCTTTAAAA  994

seq1  TGCTATGAGGATCTTCACACTCCTTCAAGTAGAAGGAGTATATA-TTGAA  1048
      |||||||||||||||||| |||||||||||||||||||||  || |||||
seq2  TGCTATGAGGATCTTCACCCTCCTTCAAGTAGAAGGAGTAATTATTTGAA  1044

seq1  TTTTTTGTTGAAGGATTAACAGGATAGCTTCCAAAGAATGCAGGCAGGCT  1098
      ||||||| |||||||||||||||||||| |||||| |||||| ||| |||
seq2  TTTTTTGGTGAAGGATTAACAGGATAGC-TCCAAA-AATGCAAGCAAGCT  1092

seq1  GTTTCTGTTTTGAATGTCATGTGGGAC  1125
      ||||| |||||  ||||||||||||||
seq2  GTTTC-GTTTTTGATGTCATGTGGGAC  1118