BAC Information

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BAC

Clone NameB6Ng01-093B17
Chromosome13 (Build37)8 (Build37)
Map Location 80,774,959 - 80,775,896109,609,010 - 109,609,247
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093B17.bB6Ng01-093B17.g
ACCDH904684DH904685
length1,023767
definitionDH904684|Mus musculus domesticus DNA, BAC clone: B6Ng01-093B17, 5' end.DH904685|Mus musculus domesticus DNA, BAC clone: B6Ng01-093B17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(80,774,959 - 80,775,896)(109,609,010 - 109,609,247)
sequence
gaattctcacctaaggaataccaaatggttgagaagcacctgaaaaaatg
ttcagcatccttaatcatcaggaaaattcaaatcaaagcaaccctgagat
tccaccttacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgatgaggatgtggagaaagaggaacactcctccattgatggtg
ggattgcaagattgtacaaccactctggaaatcagtctgtggttcctcag
aaaattggacatagtactacaggaggatccagcaatacttctcctgggca
tatatccagaagatgttccaactggtaagaaggacacatgcttcactatg
ttcatgggcattgatcatgactatgaaagtgaccagtatttccttcctac
attccctttccaaatgcaattttcgttttagtttcataagccaacataag
ccaaatgtgcccattcccaataattagattgtttttctaagtattccttg
ccttgtaatgcttaaaaggaagcaaaatagtcatgtcccacaatttagca
aggcacgtcccactctgccaaacatgcacttgattaaatgtatatgttac
acaaccttttctctaaaggtaatggggtttctgttcttggtttcttgact
gatttgtccacaccatgaatgggaggagcataaaaaataaagaaatatct
taacagcagatttcagccatgctaacaagtaggttaaccagtgagatcct
agcatatgctaatatagaaccatgcaaaacccgtgtgcagcaatgccatt
ccacagagaaccagaaaaaataaaaagagcatgctctagggtcatcagat
ctttggacagtgttcatacaaggtcagaagtaagtttgtggtatttctag
acagttcatatatattaactatcatttattgcacgagtgagtaatcactt
ttaaagtctattaccttaattaataaatcctttgttggtggcagataatg
ataattgaggcttatcatttctg
gaattccaggaattgctatggtgggagaatgggttctgatgatgccaagt
aatcttggtttctgttgcttatgttcttatgcttgactcctgctatctga
ttatctctagtgctacctgccctttgtggggaattgcaggctggtctcca
gttgagttgaggtctgaaccctgaggtcataattcacctacatggtaggt
gttccctcatgctcctggaactctggcccctccctaagttaccacccacc
acagcccccacaagagaagcatggtcaatagtcatgtaagcaagcttctg
accttcaggctaaactcctccccagttacctagcaacagtgaagaccata
aaaagggctgttcagcccccaccttcctctcttgctcttactcttgagtt
cttacttcttacccctcagtcttaccctctctctcccctctctttgtctt
cttccctttttctgtcttcttttctcctctctcctctcctctcctctctc
tctctctctctctctctcactctcacgatctcacactccttaatgggcaa
ggagaacaggaagatctcctccaaggactttgatcttcttgtccttaacc
aggcagcccagcttgggcgaccggggatccactccttgtcttcagcttta
cctccacgagccccgcagcctgaccacggccacggcctcggagcacgaac
agcggcccctaagaccgctgccgaatcctgtgcgaaagcgctgcggcctc
ctaattctgggcccccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80774959_80775896
seq2: B6Ng01-093B17.b_42_979

seq1  GAATTCTCACCTAAGGAATACCAAATGGTTGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTAAGGAATACCAAATGGTTGAGAAGCACCTGAAAAAATG  50

seq1  TTCAGCATCCTTAATCATCAGGAAAATTCAAATCAAAGCAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCCTTAATCATCAGGAAAATTCAAATCAAAGCAACCCTGAGAT  100

seq1  TCCACCTTACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTTACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGATGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGATGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGATGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGATGGTG  200

seq1  GGATTGCAAGATTGTACAACCACTCTGGAAATCAGTCTGTGGTTCCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAAGATTGTACAACCACTCTGGAAATCAGTCTGTGGTTCCTCAG  250

seq1  AAAATTGGACATAGTACTACAGGAGGATCCAGCAATACTTCTCCTGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGGACATAGTACTACAGGAGGATCCAGCAATACTTCTCCTGGGCA  300

seq1  TATATCCAGAAGATGTTCCAACTGGTAAGAAGGACACATGCTTCACTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCAGAAGATGTTCCAACTGGTAAGAAGGACACATGCTTCACTATG  350

seq1  TTCATGGGCATTGATCATGACTATGAAAGTGACCAGTATTTCCTTCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGGCATTGATCATGACTATGAAAGTGACCAGTATTTCCTTCCTAC  400

seq1  ATTCCCTTTCCAAATGCAATTTTCGTTTTAGTTTCATAAGCCAACATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTTCCAAATGCAATTTTCGTTTTAGTTTCATAAGCCAACATAAG  450

seq1  CCAAATGTGCCCATTCCCAATAATTAGATTGTTTTTCTAAGTATTCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGTGCCCATTCCCAATAATTAGATTGTTTTTCTAAGTATTCCTTG  500

seq1  CCTTGTAATGCTTAAAAGGAAGCAAAATAGTCATGTCCCACAATTTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTAATGCTTAAAAGGAAGCAAAATAGTCATGTCCCACAATTTAGCA  550

seq1  AGGCACGTCCCACTCTGCCAAACATGCACTTGATTAAATGTATATGTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACGTCCCACTCTGCCAAACATGCACTTGATTAAATGTATATGTTAC  600

seq1  ACAACCTTTTCTCTAAAGGTAATGGGGTTTCTGTTCTTGGTTTCTTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTTTTCTCTAAAGGTAATGGGGTTTCTGTTCTTGGTTTCTTGACT  650

seq1  GATTTGTCCACACCATGAATGGGAGGAGCATAAAAAATAAAGAAATATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTCCACACCATGAATGGGAGGAGCATAAAAAATAAAGAAATATCT  700

seq1  TAACAGCAGATTTCAGCCATGCTAACAAGTAGGTTAACCAGTGAGATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCAGATTTCAGCCATGCTAACAAGTAGGTTAACCAGTGAGATCCT  750

seq1  AGCATATGCTAATATAGAACCATGCAAAACCCGTGTGCAGCAATGCCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGCTAATATAGAACCATGCAAAACCCGTGTGCAGCAATGCCATT  800

seq1  CCACAGAGAACCAGAAAAAATAAAAAGAGCAGGCTCTAGGGTCACCAGAT  850
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  CCACAGAGAACCAGAAAAAATAAAAAGAGCATGCTCTAGGGTCATCAGAT  850

seq1  CCTTGGACAGTGTTCATACAAGGTCAGAAGTAAGTTTGTGGTATTTCTAG  900
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGACAGTGTTCATACAAGGTCAGAAGTAAGTTTGTGGTATTTCTAG  900

seq1  ACAGTTCATATATATTAACTATCATTTATTTCACGAGT  938
      |||||||||||||||||||||||||||||| |||||||
seq2  ACAGTTCATATATATTAACTATCATTTATTGCACGAGT  938

seq1: chr8_109609010_109609247
seq2: B6Ng01-093B17.g_594_834

seq1  GATCTCAGACTCCTTAATGGGCAAGGAGAACAGGTAGATCTCCTCCAAGG  50
      ||||||| |||||||||||||||||||||||||| |||||||||||||||
seq2  GATCTCACACTCCTTAATGGGCAAGGAGAACAGGAAGATCTCCTCCAAGG  50

seq1  AC-TTGATCTTCATGTCCTTAACCAGGCAGCCCAGCTT-GGTGA-CGGGG  97
      || ||||||||| ||||||||||||||||||||||||| || || |||||
seq2  ACTTTGATCTTCTTGTCCTTAACCAGGCAGCCCAGCTTGGGCGACCGGGG  100

seq1  ATCCACTCCTTGTCTTCAGCTTTACCTCCACGAGCCCCGCAGCCTCGACC  147
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATCCACTCCTTGTCTTCAGCTTTACCTCCACGAGCCCCGCAGCCT-GACC  149

seq1  ACGGCCACGGCCTCGG-CCACG-ACCGCGGCCCCTAAGACCGCTGCCGAA  195
      ||||||||||||||||  |||| || ||||||||||||||||||||||||
seq2  ACGGCCACGGCCTCGGAGCACGAACAGCGGCCCCTAAGACCGCTGCCGAA  199

seq1  TCCTGTGCGGAAGCCGCTGCGGCCTCCTAATCCTGGGCCCCCG  238
      ||||||||| ||| ||||||||||||||||| |||||||||||
seq2  TCCTGTGCGAAAG-CGCTGCGGCCTCCTAATTCTGGGCCCCCG  241