BAC Information

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BAC

Clone NameB6Ng01-094C23
Chromosome8 (Build37)
Map Location 60,483,115 - 60,659,759
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
Downstream gene4930431L04Rik, BC030500, LOC665116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094C23.bB6Ng01-094C23.g
ACCDH905471DH905472
length1,072566
definitionDH905471|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C23, 5' end.DH905472|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,483,115 - 60,484,195)(60,659,189 - 60,659,759)
sequence
gaattcccataaacatcatctagttttaggacaatcagcaaccagatgat
ttctcgtttacattggaattattagattatgttggaatcactcagtaggt
gatcatcatgtttactaccttcaggtttgagggtctccatgagagccatt
tcctaaacaaggcctcagatatatgtgatgctttgagtttatcaaacatt
ttccttcaagaacatccattaagagtgctgaagggcatatgaatccggaa
tttcatttttagttccaatataggactgttttaaaggtcaagtcacaaac
atttcttctattcattctgtgtttttggaacaagaaacttttctaattta
ttatagttgatctctctctattctctaagtaatgtaagtatatttctctc
tttgtattgctggtttattttatccttaattgcacttattcctgaattgg
agttgaccactctgtgatattcagctgaaaactaggatgttatttccaca
aataagtactcaagggaaccacagaaataattccttcttgggttgctact
gttccagagatggctaacttgttccccagggatcttttttcccttgaata
tatattctttggtaaatgaaagctgaaaactatattcactgaactctttc
taaattttataataattctttttcagaaagtaaacttacttttggaggtc
ttgtagaattaaccttcagtagtttatttaatacaacagaccatgaagct
tacttataaatacattaggaagatgatacataggacttgaaaaatgaaat
gataaaaacaaaaagctccagctgaggtaagtatacatgagggaatctag
ggagggataaataacactaaagactttctagaaagacatatgggagccta
ccactctggaagcttccacacacacacacacacacatcacacatcacaca
cacgatcatcagcctttctagacaacagagctaataaaaccctaggacta
ggatagaacactcttttgagggtttgggccagtgaagtgcagaccattaa
gaatgtcgtcatggctcttggt
ctatctgggtaggaaacaatatataaggcaagtacagataattagagtct
aagttttctcatgtgagcattttacacaaggtgcaagcaaacacagctgt
agtgaaaggaaaacacagtttagactaaagaaggattgcttcaaggacag
agggttgtttgagtttgcattttatggaatacttgatacctaaggaaggg
ggttaggggtttgggaggggtgaactccaaacagaagaggtgtctgtggg
aaaaccaagcagtttaaagaagttgaagcaaccgtatttgattttcattt
gtgtgtccgtgaattagtaaacatattgatgaacctagtgagtctagtga
gtacacagattgatctttagcctgaaaaatatatttggaatacatcatcc
aggatatcaaaaacaatgtcaaagaactgaatttcattctgaatttcatt
ctgaaggcattgggtatgatagaaatcttataagcaagagaaaaaagctc
aaaattcagttattattattattattattattattattattattatcatt
attatcattattatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_60483115_60484195
seq2: B6Ng01-094C23.b_49_1120

seq1  GAATTCCCATAAACATCATCTAGTTTTAGGACAATCAGCAACCAGATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATAAACATCATCTAGTTTTAGGACAATCAGCAACCAGATGAT  50

seq1  TTCTCGTTTACATTGGAATTATTAGATTATGTTGGAATCACTCAGTAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGTTTACATTGGAATTATTAGATTATGTTGGAATCACTCAGTAGGT  100

seq1  GATCATCATGTTTACTACCTTCAGGTTTGAGGGTCTCCATGAGAGCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCATGTTTACTACCTTCAGGTTTGAGGGTCTCCATGAGAGCCATT  150

seq1  TCCTAAACAAGGCCTCAGATATATGTGATGCTTTGAGTTTATCAAACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAACAAGGCCTCAGATATATGTGATGCTTTGAGTTTATCAAACATT  200

seq1  TTCCTTCAAGAACATCCATTAAGAGTGCTGAAGGGCATATGAATCCGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCAAGAACATCCATTAAGAGTGCTGAAGGGCATATGAATCCGGAA  250

seq1  TTTCATTTTTAGTTCCAATATAGGACTGTTTTAAAGGTCAAGTCACAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTTAGTTCCAATATAGGACTGTTTTAAAGGTCAAGTCACAAAC  300

seq1  ATTTCTTCTATTCATTCTGTGTTTTTGGAACAAGAAACTTTTCTAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTATTCATTCTGTGTTTTTGGAACAAGAAACTTTTCTAATTTA  350

seq1  TTATAGTTGATCTCTCTCTATTCTCTAAGTAATGTAAGTATATTTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTTGATCTCTCTCTATTCTCTAAGTAATGTAAGTATATTTCTCTC  400

seq1  TTTGTATTGCTGGTTTATTTTATCCTTAATTGCACTTATTCCTGAATTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTGCTGGTTTATTTTATCCTTAATTGCACTTATTCCTGAATTGG  450

seq1  AGTTGACCACTCTGTGATATTCAGCTGAAAACTAGGATGTTATTTCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACCACTCTGTGATATTCAGCTGAAAACTAGGATGTTATTTCCACA  500

seq1  AATAAGTACTCAAGGGAACCACAGAAATAATTCCTTCTTGGGTTGCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTACTCAAGGGAACCACAGAAATAATTCCTTCTTGGGTTGCTACT  550

seq1  GTTCCAGAGATGGCTAACTTGTTCCCCAGGGATCTTTTTTCCCTTGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGAGATGGCTAACTTGTTCCCCAGGGATCTTTTTTCCCTTGAATA  600

seq1  TATATTCTTTGGTAAATGAAAGCTGAAAACTATATTCACTGAACTCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCTTTGGTAAATGAAAGCTGAAAACTATATTCACTGAACTCTTTC  650

seq1  TAAATTTTATAATAATTCTTTTTCAGAAAGTAAACTTACTTTTGGAGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTATAATAATTCTTTTTCAGAAAGTAAACTTACTTTTGGAGGTC  700

seq1  TTGTAGAATTAACCTTCAGTAGTTTATTTAATACAACAGACCATGAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAATTAACCTTCAGTAGTTTATTTAATACAACAGACCATGAAGCT  750

seq1  TACTTATAAATACATTAGGAAGATGATACATAGGACTTGAAAAATGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATAAATACATTAGGAAGATGATACATAGGACTTGAAAAATGAAAT  800

seq1  GATAAAAAACAAAAGGCTCCAGCTGAGGTAAGTATACATGAGGGAATCTA  850
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAT-AAAAACAAAAAGCTCCAGCTGAGGTAAGTATACATGAGGGAATCTA  849

seq1  GGGAGGGATAAATAACACTAAAGACTTTCTAGAAAGACATATGGGAGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGATAAATAACACTAAAGACTTTCTAGAAAGACATATGGGAGCCT  899

seq1  ACCACTCTGGAAGCTTCACACACACACACACACACACA-CACACACACAC  949
      ||||||||||||||||| |||||||||||||||||||| ||||||  |||
seq2  ACCACTCTGGAAGCTTC-CACACACACACACACACACATCACACA-TCAC  947

seq1  ACACACACACACACAGCCTTTTCTAGACAACAGAAGCTAATAAAAACCCT  999
      ||||||   ||  ||||| |||||||||||||| ||||||| ||||||||
seq2  ACACACGATCA-TCAGCC-TTTCTAGACAACAG-AGCTAAT-AAAACCCT  993

seq1  AGAACTAGGAATAGGACACTTCTTTTGGAGGTTTTGGCCAGTGAAGTGCC  1049
      || |||||| |||| |||| |||||||  ||||| ||||||||||||| |
seq2  AGGACTAGG-ATAGAACAC-TCTTTTGAGGGTTTGGGCCAGTGAAGTG-C  1040

seq1  AGA-CATTACAGAATGTCGTCATTGCTCTTGGT  1081
      ||| ||||| ||||||||||||| |||||||||
seq2  AGACCATTA-AGAATGTCGTCATGGCTCTTGGT  1072

seq1: chr8_60659189_60659759
seq2: B6Ng01-094C23.g_67_638 (reverse)

seq1  TAATAATAATAATAATAATGATAATAATAATAATAATAATAATAATAATA  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATGATAATAATGATAATAATAATAATAATAATAATAATAATA  50

seq1  ATAATAACTGAATTTTGAGC-TTTTTCTCTTGCTTATAAGATTTCTATCA  99
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATAATAACTGAATTTTGAGCTTTTTTCTCTTGCTTATAAGATTTCTATCA  100

seq1  TACCCAATGCCTTCAGAATGAAATTCAGAATGAAATTCAGTTCTTTGACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAATGCCTTCAGAATGAAATTCAGAATGAAATTCAGTTCTTTGACA  150

seq1  TTGTTTTTGATATCCTGGATGATGTATTCCAAATATATTTTTCAGGCTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTGATATCCTGGATGATGTATTCCAAATATATTTTTCAGGCTAA  200

seq1  AGATCAATCTGTGTACTCACTAGACTCACTAGGTTCATCAATATGTTTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAATCTGTGTACTCACTAGACTCACTAGGTTCATCAATATGTTTAC  250

seq1  TAATTCACGGACACACAAATGAAAATCAAATACGGTTGCTTCAACTTCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACGGACACACAAATGAAAATCAAATACGGTTGCTTCAACTTCTT  300

seq1  TAAACTGCTTGGTTTTCCCACAGACACCTCTTCTGTTTGGAGTTCACCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGCTTGGTTTTCCCACAGACACCTCTTCTGTTTGGAGTTCACCCC  350

seq1  TCCCAAACCCCTAACCCCCTTCCTTAGGTATCAAGTATTCCATAAAATGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACCCCTAACCCCCTTCCTTAGGTATCAAGTATTCCATAAAATGC  400

seq1  AAACTCAAACAACCCTCTGTCCTTGAAGCAATCCTTCTTTAGTCTAAACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAAACAACCCTCTGTCCTTGAAGCAATCCTTCTTTAGTCTAAACT  450

seq1  GTGTTTTCCTTTCACTACAGCTGTGTTTGCTTGCACCTTGTGTAAAATGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCCTTTCACTACAGCTGTGTTTGCTTGCACCTTGTGTAAAATGC  500

seq1  TCACATGAGAAAACTTAGACTCTAATTATCTGTACTTGCCTTATATATTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGAGAAAACTTAGACTCTAATTATCTGTACTTGCCTTATATATTG  550

seq1  TTTCCTACCCAGATAGGAATTC  571
      ||||||||||||||||||||||
seq2  TTTCCTACCCAGATAGGAATTC  572