BAC Information

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BAC

Clone NameB6Ng01-094F08
Chromosome8 (Build37)
Map Location 26,859,706 - 27,043,690
singlet/doubletdoublet
Overlap geneBag4, Lsm1, Star, Ash2l, Kcnu1
Upstream geneAdam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1
Downstream geneHgsnat, 4930444A02Rik, Fnta, Hook3, 1700047A11Rik, Rnf170, Thap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094F08.bB6Ng01-094F08.g
ACCDH905585DH905586
length1,1681,104
definitionDH905585|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F08, 5' end.DH905586|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,042,511 - 27,043,690)(26,859,706 - 26,860,821)
sequence
gaattctttagcttttcaggtattgaagcaatagtgagaaccaggaccac
actccttagctggagccctgctgtgacttggttgaaactgtgacatcctc
aggtaagcctcagagtttgggtttttttgttttgtttgtttgttttggtc
tgttaaatgaaattagttacttaactcgtgccatccctggacagattaaa
cacaaaagactaaaatagatacagagaagatctaggacttctagatacta
gaaggctgaggtcaaggggactagatatgacaacttattactgcattgtc
tcatgacaagttgaaagggcaagagatgtcccaggcaaaaaagaagggag
aaggaagtcgaggccaccttcaactgaaaacctactcctgctagtgatgc
ctagtccattatggtccgtcaaataatcatctgtaataggctcacccttc
attcaacacggttgcatgagtttccaatatgggatctataggggacacat
tcagacatagtgttgggcctctcagatgctgcttgcatcctcagctggag
ggcagagaaagcaactgcatcctctacctcttgagattgtcccagagaat
aaactcaactgataaaaacatactgtgcgcaggcgctctgaagttatagt
gctatattgtgttaagtatttcccaattattattcctgggttgtcaagtt
atctatgaacccaataaacctgtttccataagcacagagggctaaggatg
taggaaaatgctttacacgaagagtagaactcacattaatgcctgataga
acggtttggtctaaagagaggagtcccagcttacaccgcgtcctcccaga
cttgattgcctcatagtcgtcagttgtcttatagggcttctccttaacca
aatagtgttccatctcagagcttatgcctccagtcactagcatctgaagt
aattccacgacatggtaattgtagacgactggaaagtaggacagccatgt
gtgaaattacagggcaacacatgattgtacaggcattgggacatggagaa
tcatgagcatcaccgtggtgaaatggttctgatggtgcagaaaaactgat
ctcattggtgctatcaaatcgactgcaagtgaagtttggggatggaggtg
atagtcaaagcaggagaa
gaattctcattacatacaagaatggcagcctacattacatattattagaa
agaaggtgggttgtggtttaaggaggaactggagtactgtattattcatg
aaagggttagtagtacagaactgccctggggcatgtttttcactaggccc
agaggaacagaataactaggtatttaccaagggacccctggtggtgagtt
taacaatagaccagcattgcatcagaccactcacctggttcctgtgaata
cctgattttagatagggctgttcctatctcaactgtaaacattgcctggt
tcctgccagtctttttgcatgcattttttgttttgtgtcagataacttca
atgtaccttggctgatgtgtcacctaacttctttgctttcttctataata
tataagtctgatgctctttttgagaaattacgtccacaaattatagaata
aatcaacatcagaacataaggaaaaataaaggattaacattaccacagtg
aatatcaacagggatgttctcgacgcctctttttactgatcttggccgac
cttgctcagtggatgttgaaccccattcatcagaccctgcaattggctgg
taatgcaccatgagcttaaacagaaaagatcagagcaatatagtctacat
tcacttgtgatttaagactttttttttttttttttttttggagacagggt
ttctctgtatagccctggctgtcctgaactcactttgtagaccaggctgg
ccttgaactcagaaatctgcctgcctctgcctcccaagtgctgggattaa
aggcgtgggcgatttaagacattttgatgacaaaaaacaaatctgtcata
taaccaaaccttaattggagttttgacatgcaagtcctataagcctgcaa
gtaaaaagaagcctgacatacattaaactagcagatcagatgggccagtg
ttggtggggcatgcttttatcctgcacatgggaggcagagctagacctct
gtgagttgatcagcaccatgaaccttcatcccagcctctggtgctgagat
gtgagcagaaaaatgatcctgggaggtagacaggagcctacagctagctg
cctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_27042511_27043690
seq2: B6Ng01-094F08.b_46_1213 (reverse)

seq1  TTCTCCCTGCTTTGACTAATCCACCTCCATACCCAAACTTCCAACTTGCA  50
      |||| |||||||||||||   ||||||||| ||||||||||  |||||||
seq2  TTCT-CCTGCTTTGACTA--TCACCTCCATCCCCAAACTTC--ACTTGCA  45

seq1  GTCGATTTTGATAGCCACAATGAAGATCAG-TGTTCTGCACCATCAGGAC  99
      ||||| |||||||||  ||||| ||||||| | |||||||||||||| ||
seq2  GTCGA-TTTGATAGCACCAATG-AGATCAGTTTTTCTGCACCATCAGAAC  93

seq1  CATTTCA-CACGGTGATGCTCATTGAATCTCCATGTCCCAATGCCTGTAC  148
      ||||||| |||||||||||||| ||| |||||||||||||||||||||||
seq2  CATTTCACCACGGTGATGCTCA-TGATTCTCCATGTCCCAATGCCTGTAC  142

seq1  AATTCATGTGTTGGCCCTTGTAATTTCACACATGGCTTGTCCTTACTTTC  198
      || ||||||||||  || |||||||||||||||||| ||||| |||||||
seq2  AA-TCATGTGTTG--CCCTGTAATTTCACACATGGC-TGTCC-TACTTTC  187

seq1  CAGTCCTTCTACAATTACCATGTCGTGGAATTACTTCAGATGCTAGTGAC  248
      |||| | |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGT-CGTCTACAATTACCATGTCGTGGAATTACTTCAGATGCTAGTGAC  236

seq1  TGGAGGCATAAGCTCTGAGATGGAACACTATTTGGTTAAGGAGAAGCCCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCATAAGCTCTGAGATGGAACACTATTTGGTTAAGGAGAAGCCCT  286

seq1  ATAAGACAACTGACGACTATGAGGCAATCAAGTCTGGGAGGACGCGGTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAACTGACGACTATGAGGCAATCAAGTCTGGGAGGACGCGGTGT  336

seq1  AAGCTGGGACTCCTCTCTTTAGACCAAACCGTTCTATCAGGCATTAATGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGGACTCCTCTCTTTAGACCAAACCGTTCTATCAGGCATTAATGT  386

seq1  GAGTTCTACTCTTCGTGTAAAGCATTTTCCTACATCCTTAGCCCTCTGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTACTCTTCGTGTAAAGCATTTTCCTACATCCTTAGCCCTCTGTG  436

seq1  CTTATGGAAACAGGTTTATTGGGTTCATAGATAACTTGACAACCCAGGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGGAAACAGGTTTATTGGGTTCATAGATAACTTGACAACCCAGGAA  486

seq1  TAATAATTGGGAAATACTTAACACAATATAGCACTATAACTTCAGAGCGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTGGGAAATACTTAACACAATATAGCACTATAACTTCAGAGCGC  536

seq1  CTGCGCACAGTATGTTTTTATCAGTTGAGTTTATTCTCTGGGACAATCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGCACAGTATGTTTTTATCAGTTGAGTTTATTCTCTGGGACAATCTC  586

seq1  AAGAGGTAGAGGATGCAGTTGCTTTCTCTGCCCTCCAGCTGAGGATGCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTAGAGGATGCAGTTGCTTTCTCTGCCCTCCAGCTGAGGATGCAA  636

seq1  GCAGCATCTGAGAGGCCCAACACTATGTCTGAATGTGTCCCCTATAGATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATCTGAGAGGCCCAACACTATGTCTGAATGTGTCCCCTATAGATC  686

seq1  CCATATTGGAAACTCATGCAACCGTGTTGAATGAAGGGTGAGCCTATTAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTGGAAACTCATGCAACCGTGTTGAATGAAGGGTGAGCCTATTAC  736

seq1  AGATGATTATTTGACGGACCATAATGGACTAGGCATCACTAGCAGGAGTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATTATTTGACGGACCATAATGGACTAGGCATCACTAGCAGGAGTA  786

seq1  GGTTTTCAGTTGAAGGTGGCCTCGACTTCCTTCTCCCTTCTTTTTTGCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCAGTTGAAGGTGGCCTCGACTTCCTTCTCCCTTCTTTTTTGCCT  836

seq1  GGGACATCTCTTGCCCTTTCAACTTGTCATGAGACAATGCAGTAATAAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATCTCTTGCCCTTTCAACTTGTCATGAGACAATGCAGTAATAAGT  886

seq1  TGTCATATCTAGTCCCCTTGACCTCAGCCTTCTAGTATCTAGAAGTCCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATCTAGTCCCCTTGACCTCAGCCTTCTAGTATCTAGAAGTCCTA  936

seq1  GATCTTCTCTGTATCTATTTTAGTCTTTTGTGTTTAATCTGTCCAGGGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCTCTGTATCTATTTTAGTCTTTTGTGTTTAATCTGTCCAGGGAT  986

seq1  GGCACGAGTTAAGTAACTAATTTCATTTAACAGACCAAAACAAACAAACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACGAGTTAAGTAACTAATTTCATTTAACAGACCAAAACAAACAAACA  1036

seq1  AAACAAAAAAACCCAAACTCTGAGGCTTACCTGAGGATGTCACAGTTTCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAAACCCAAACTCTGAGGCTTACCTGAGGATGTCACAGTTTCA  1086

seq1  ACCAAGTCACAGCAGGGCTCCAGCTAAGGAGTGTGGTCCTGGTTCTCACT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTCACAGCAGGGCTCCAGCTAAGGAGTGTGGTCCTGGTTCTCACT  1136

seq1  ATTGCTTCAATACCTGAAAAGCTAAAGAATTC  1180
      ||||||||||||||||||||||||||||||||
seq2  ATTGCTTCAATACCTGAAAAGCTAAAGAATTC  1168

seq1: chr8_26859706_26860821
seq2: B6Ng01-094F08.g_67_1170

seq1  GAATTCTCATTACATACAAGAATGGCAGCCTACATTACATATTATTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTACATACAAGAATGGCAGCCTACATTACATATTATTAGAA  50

seq1  AGAAGGTGGGTTGTGGTTTAAGGAGGAACTGGAGTACTGTATTATTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGGGTTGTGGTTTAAGGAGGAACTGGAGTACTGTATTATTCATG  100

seq1  AAAGGGTTAGTAGTACAGAACTGCCCTGGGGCATGTTTTTCACTAGGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTAGTAGTACAGAACTGCCCTGGGGCATGTTTTTCACTAGGCCC  150

seq1  AGAGGAACAGAATAACTAGGTATTTACCAAGGGACCCCTGGTGGTGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAACAGAATAACTAGGTATTTACCAAGGGACCCCTGGTGGTGAGTT  200

seq1  TAACAATAGACCAGCATTGCATCAGACCACTCACCTGGTTCCTGTGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATAGACCAGCATTGCATCAGACCACTCACCTGGTTCCTGTGAATA  250

seq1  CCTGATTTTAGATAGGGCTGTTCCTATCTCAACTGTAAACATTGCCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTTTAGATAGGGCTGTTCCTATCTCAACTGTAAACATTGCCTGGT  300

seq1  TCCTGCCAGTCTTTTTGCATGCATTTTTTGTTTTGTGTCAGATAACTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCAGTCTTTTTGCATGCATTTTTTGTTTTGTGTCAGATAACTTCA  350

seq1  ATGTACCTTGGCTGATGTGTCACCTAACTTCTTTGCTTTCTTCTATAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCTTGGCTGATGTGTCACCTAACTTCTTTGCTTTCTTCTATAATA  400

seq1  TATAAGTCTGATGCTCTTTTTGAGAAATTACGTCCACAAATTATAGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTCTGATGCTCTTTTTGAGAAATTACGTCCACAAATTATAGAATA  450

seq1  AATCAACATCAGAACATAAGGAAAAATAAAGGATTAACATTACCACAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACATCAGAACATAAGGAAAAATAAAGGATTAACATTACCACAGTG  500

seq1  AATATCAACAGGGATGTTCTCGACGCCTCTTTTTACTGATCTTGGCCGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAACAGGGATGTTCTCGACGCCTCTTTTTACTGATCTTGGCCGAC  550

seq1  CTTGCTCAGTGGATGTTGAACCCCATTCATCAGACCCTGCAATTGGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCAGTGGATGTTGAACCCCATTCATCAGACCCTGCAATTGGCTGG  600

seq1  TAATGCACCATGAGCTTAAACAGAAAAGATCAGAGCAATATAGTCTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCACCATGAGCTTAAACAGAAAAGATCAGAGCAATATAGTCTACAT  650

seq1  TCACTTGTGATTTAAGACTTTTTTTTTTTTTTTTTTTTTGGAGACAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGTGATTTAAGACTTTTTTTTTTTTTTTTTTTTTGGAGACAGGGT  700

seq1  TTCTCTGTATAGCCCTGGCTGTCCTGAACTCACTTTGTAGACCAGGCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATAGCCCTGGCTGTCCTGAACTCACTTTGTAGACCAGGCTGG  750

seq1  CCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAA  800

seq1  AGGCGTGGGCGATTTAAGACATTTTGAATGAC-AAAAACAAATCTGTCAT  849
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  AGGCGTGGGCGATTTAAGACATTTTG-ATGACAAAAAACAAATCTGTCAT  849

seq1  ATAACCAAACCTTAATTGGAGTTTTGACATGCAAGTCCTAT-AGCCTGCA  898
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATAACCAAACCTTAATTGGAGTTTTGACATGCAAGTCCTATAAGCCTGCA  899

seq1  AGTAAAAAAGAAGCCTGACAATACATTAAACTAGCAGATCAGATGGGCCA  948
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGT-AAAAAGAAGCCTGAC-ATACATTAAACTAGCAGATCAGATGGGCCA  947

seq1  GGTGTGGTGGTGCATGCTTTTAATTCCTGCACATGGGAGGCAGAAGCAAG  998
      |   |||||| |||||||||||  ||||||||||||||||||| ||| ||
seq2  GTGTTGGTGGGGCATGCTTTTA--TCCTGCACATGGGAGGCAG-AGCTAG  994

seq1  AACTTCTGTGAGTTTGAATCAGCA-CATGAACC-TCATCCCCAGCTCTGG  1046
       || ||||||||||   ||||||| |||||||| |||||||   ||||||
seq2  -ACCTCTGTGAGTT--GATCAGCACCATGAACCTTCATCCCAGCCTCTGG  1041

seq1  TGCTGAGATGTGAGGCAGAACAAAGGATTCTGGGAGGTAGACAGGGAAGC  1096
      ||||||||||||| |||||| ||| ||| ||||||||||||||||  |||
seq2  TGCTGAGATGTGA-GCAGAA-AAATGATCCTGGGAGGTAGACAGG--AGC  1087

seq1  CTTACAAGCTAGCTAGCCTG  1116
      | ||| |||||||| |||||
seq2  C-TAC-AGCTAGCT-GCCTG  1104