BAC Information

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BAC

Clone NameB6Ng01-094G07
Chromosome8 (Build37)
Map Location 58,974,569 - 59,107,600
singlet/doubletdoublet
Overlap geneBC088983, Fbxo8, LOC100040431
Upstream geneGm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948
Downstream geneEG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G07.bB6Ng01-094G07.g
ACCDH905629DH905630
length1,012893
definitionDH905629|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G07, 5' end.DH905630|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,974,569 - 58,975,582)(59,106,705 - 59,107,600)
sequence
gaattcaataaactaagttttaaaaacaaatgaaggaaaatttaaaaaaa
actaccagttacaatattcacatacaccatctcacagaacactaggcaaa
atataccccttgatcatcactgcatttttatacagctgcagccaaccagc
cattccaaggcactgagagaactcacagctgaagacgaatgagggtatgt
aagccatagtggtattctgaacatctgttttcaatgctagaaagccatta
tgcaaaactaaattgttgtcttaggcaaatggctacactgtttccttcct
acacagacaattttatagacaacctgagccctgtctctattgtgtaagag
atgccatgggtttgttggtctcctgtcttgcataatcataagagacagac
catcataaaagcagaatgaatgcaaacatttagatgcatgggcaggggag
caaatttagggttactaaatgtcttagtattgctgtgaagagacaccata
accatggtaattcttataaaggaaaccatttagttggggctggcttacag
gttcagaggttgagtctacccagtcatcacagtggaaaacatgacagcct
gcacgtagacatggtgctggagaaggagctgtgacttttacatctggatc
tgaaggcagcagaaagagactgtcacactgggcacaacttgtgacatata
caaccaccagacagactgaataatcaaggtagcacccagaacacagggtt
caaggcagctgaggcagcatcagtccaactgtagtgtgaggcaactcaca
tagaagggctgttgcgtcacagatccatggataggagtgtttatgttagt
aagccttcggtggggcctgagatttggctttggtaaaagttatttacaaa
tgttgatttttttcctgttctggagtaagtagtaatggggttgtcgatag
gggaagtagattctacagcatggaaggtagttagctgcccagctatttgc
tgcttaaaggct
gaattcacttatgtgaggagtagaaccatcattaaaagtgtccctgcccc
gaaaatagctcaccttgtagtgaaattgcttaaaatgttagcttctcatc
ctatgtttaaacagcacacaaaacatccgctttagggcagcaatagaagg
ttcaaccagagagtccattaaatcacccaatagttcctctgtgggaataa
attacatctgcttgctcttgagacctagtcaggtcttgagaaggcctggg
aagatctggcatgtaatgacagtagtaatagagaagacacatgatccctg
gcgttatcacctcaggaaactctgaggtgttctgggcccactaagctagg
tatggggggaggaggctaaaaaagagacaggaagggcagcaacaggaaat
gcagactcactgggcggtggtggtgcacgcctttaatcccagcactcagg
aggcagaggcaggcggatttctgagtttgaagccagcctggtctacagag
tgagttctaggacagccaggcctatacagagaaaccctgtctcaaaaaac
caaaaaaaaaaaaaaaaaaaaaaaaaggaaatgcagactcttgtaggctg
ggagagtggaggaaagatatttagcaaggggaaaggataggttgggacag
ggtttgggggcactctctttatttcatctctacagctagtcagcggaatt
cctacttttcaagcaacacaagtctttcatttctatgtgaacctttctat
tcttctagcatgacagcagttaaaatgggtttcccccttgtgtctgttac
agtacccatgataccaggtacgtttattcatctggactggtctttgcatt
aggcacttaactcctctctaggttcagccaggaaacctccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58974569_58975582
seq2: B6Ng01-094G07.b_44_1055

seq1  GAATTCAATAAACTAAGTTTTAAAAACAAATGAAGGAAAATTTAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAACTAAGTTTTAAAAACAAATGAAGGAAAATTTAAAAAAA  50

seq1  ACTACCAGTTACAATATTCACATACACCATCTCACAGAACACTAGGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCAGTTACAATATTCACATACACCATCTCACAGAACACTAGGCAAA  100

seq1  ATATACCCCTTGATCATCACTGCATTTTTATACAGCTGCAGCCAACCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCCCTTGATCATCACTGCATTTTTATACAGCTGCAGCCAACCAGC  150

seq1  CATTCCAAGGCACTGAGAGAACTCACAGCTGAAGACGAATGAGGGTATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAAGGCACTGAGAGAACTCACAGCTGAAGACGAATGAGGGTATGT  200

seq1  AAGCCATAGTGGTATTCTGAACATCTGTTTTCAATGCTAGAAAGCCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATAGTGGTATTCTGAACATCTGTTTTCAATGCTAGAAAGCCATTA  250

seq1  TGCAAAACTAAATTGTTGTCTTAGGCAAATGGCTACACTGTTTCCTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAACTAAATTGTTGTCTTAGGCAAATGGCTACACTGTTTCCTTCCT  300

seq1  ACACAGACAATTTTATAGACAACCTGAGCCCTGTCTCTATTGTGTAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACAATTTTATAGACAACCTGAGCCCTGTCTCTATTGTGTAAGAG  350

seq1  ATGCCATGGGTTTGTTGGTCTCCTGTCTTGCATAATCATAAGAGACAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATGGGTTTGTTGGTCTCCTGTCTTGCATAATCATAAGAGACAGAC  400

seq1  CATCATAAAAGCAGAATGAATGCAAACATTTAGATGCATGGGCAGGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAAAAGCAGAATGAATGCAAACATTTAGATGCATGGGCAGGGGAG  450

seq1  CAAATTTAGGGTTACTAAATGTCTTAGTATTGCTGTGAAGAGACACCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTAGGGTTACTAAATGTCTTAGTATTGCTGTGAAGAGACACCATA  500

seq1  ACCATGGTAATTCTTATAAAGGAAACCATTTAGTTGGGGCTGGCTTACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTAATTCTTATAAAGGAAACCATTTAGTTGGGGCTGGCTTACAG  550

seq1  GTTCAGAGGTTGAGTCTACCCAGTCATCACAGTGGAAAACATGACAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAGGTTGAGTCTACCCAGTCATCACAGTGGAAAACATGACAGCCT  600

seq1  GCACGTAGACATGGTGCTGGAGAAGGAGCTGTGACTTTTACATCTGGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTAGACATGGTGCTGGAGAAGGAGCTGTGACTTTTACATCTGGATC  650

seq1  TGAAGGCAGCAGAAAGAGACTGTCACACTGGGCACAACTTGTGACATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCAGCAGAAAGAGACTGTCACACTGGGCACAACTTGTGACATATA  700

seq1  CAACCACCAGACAGACTGAATAATCAAGGTAGCACCCAGAACACAGGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACCAGACAGACTGAATAATCAAGGTAGCACCCAGAACACAGGGTT  750

seq1  CAAGGCAGCTGAGGCAGCATCAGTCCAACTGTAGTGTGAGGCAACTCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGCTGAGGCAGCATCAGTCCAACTGTAGTGTGAGGCAACTCACA  800

seq1  TAGAAGGGCTGTTGCGTCACAGATCCATGGATAGGAGTGTTTATGTTAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGGCTGTTGCGTCACAGATCCATGGATAGGAGTGTTTATGTTAGT  850

seq1  AAGCCTTCGGTGGGGCCTGAGATTTGGCTTTGGTAAAAAGTTATTTACAA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGCCTTCGGTGGGGCCTGAGATTTGGCTTTGGT-AAAAGTTATTTACAA  899

seq1  ATGTTGATTTTTTTCCTGTTCTGGAGTAAGTAGTAATGGGGTTGTCGATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGATTTTTTTCCTGTTCTGGAGTAAGTAGTAATGGGGTTGTCGATA  949

seq1  GGGGAAGTAGATTCTAACAGCATGGAAGGTAGTTAGCTGCCCAGCTATTT  1000
      ||||||||||||||| ||||||||||||||||||||||||||||||| ||
seq2  GGGGAAGTAGATTCT-ACAGCATGGAAGGTAGTTAGCTGCCCAGCTA-TT  997

seq1  TGCTGCTT-AAGGCT  1014
      |||||||| ||||||
seq2  TGCTGCTTAAAGGCT  1012

seq1: chr8_59106705_59107600
seq2: B6Ng01-094G07.g_69_961 (reverse)

seq1  CATGAGAGGTTTCCTGGCTGAACCTAGAGAGGAGTTAAGTGCCTAATGCA  50
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATG-GAGGTTTCCTGGCTGAACCTAGAGAGGAGTTAAGTGCCTAATGC-  48

seq1  AAAGACCAGTCCAGATGAATAAAACGTACCTGGTATCATGGGTACTGGTA  100
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  AAAGACCAGTCCAGATGAAT-AAACGTACCTGGTATCATGGGTACT-GTA  96

seq1  ACAAGACACAAGGGGGAAACCCATTTTAACTGCTGTCATGCTAGAAGAAT  150
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AC-AGACACAAGGGGGAAACCCATTTTAACTGCTGTCATGCTAGAAGAAT  145

seq1  AG-AAGGTTCACATAGAAATGAAAGACTTGTGTTGCTTGAAAAGTAGGAA  199
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGTTCACATAGAAATGAAAGACTTGTGTTGCTTGAAAAGTAGGAA  195

seq1  TTCCGCTGACTAGCTGTAGAGATG-AATAAAGAGAGTGCCCCCAAACCCT  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCCGCTGACTAGCTGTAGAGATGAAATAAAGAGAGTGCCCCCAAACCCT  245

seq1  GTCCCAACCTATCCTTTCCCCTTGCTAAATATCTTTCCTCCACTCTCCCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAACCTATCCTTTCCCCTTGCTAAATATCTTTCCTCCACTCTCCCA  295

seq1  GCCTACAAGAGTCTGCATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACAAGAGTCTGCATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGGT  345

seq1  TTTTTGAGACAGGGTTTCTCTGTATAGGCCTGGCTGTCCTAGAACTCACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGACAGGGTTTCTCTGTATAGGCCTGGCTGTCCTAGAACTCACT  395

seq1  CTGTAGACCAGGCTGGCTTCAAACTCAGAAATCCGCCTGCCTCTGCCTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGACCAGGCTGGCTTCAAACTCAGAAATCCGCCTGCCTCTGCCTCC  445

seq1  TGAGTGCTGGGATTAAAGGCGTGCACCACCACCGCCCAGTGAGTCTGCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTGGGATTAAAGGCGTGCACCACCACCGCCCAGTGAGTCTGCAT  495

seq1  TTCCTGTTGCTGCCCTTCCTGTCTCTTTTTTAGCCTCCTCCCCCCATACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTGCTGCCCTTCCTGTCTCTTTTTTAGCCTCCTCCCCCCATACC  545

seq1  TAGCTTAGTGGGCCCAGAACACCTCAGAGTTTCCTGAGGTGATAACGCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTAGTGGGCCCAGAACACCTCAGAGTTTCCTGAGGTGATAACGCCA  595

seq1  GGGATCATGTGTCTTCTCTATTACTACTGTCATTACATGCCAGATCTTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCATGTGTCTTCTCTATTACTACTGTCATTACATGCCAGATCTTCC  645

seq1  CAGGCCTTCTCAAGACCTGACTAGGTCTCAAGAGCAAGCAGATGTAATTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTTCTCAAGACCTGACTAGGTCTCAAGAGCAAGCAGATGTAATTT  695

seq1  ATTCCCACAGAGGAACTATTGGGTGATTTAATGGACTCTCTGGTTGAACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCACAGAGGAACTATTGGGTGATTTAATGGACTCTCTGGTTGAACC  745

seq1  TTCTATTGCTGCCCTAAAGCGGATGTTTTGTGTGCTGTTTAAACATAGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTGCTGCCCTAAAGCGGATGTTTTGTGTGCTGTTTAAACATAGGA  795

seq1  TGAGAAGCTAACATTTTAAGCAATTTCACTACAAGGTGAGCTATTTTCGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCTAACATTTTAAGCAATTTCACTACAAGGTGAGCTATTTTCGG  845

seq1  GGCAGGGACACTTTTAATGATGGTTCTACTCCTCACATAAGTGAATTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGACACTTTTAATGATGGTTCTACTCCTCACATAAGTGAATTC  893