BAC Information

Click to search

BAC

Clone NameB6Ng01-094K10
Chromosome8 (Build37)
Map Location 130,432,139 - 130,547,577
singlet/doubletdoublet
Overlap genenone
Upstream geneTomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
Downstream geneNrp1, LOC668494, Itgb1, LOC100042659, LOC100042667, Ccdc7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094K10.bB6Ng01-094K10.g
ACCDH905814DH905815
length1,099843
definitionDH905814|Mus musculus domesticus DNA, BAC clone: B6Ng01-094K10, 5' end.DH905815|Mus musculus domesticus DNA, BAC clone: B6Ng01-094K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,432,139 - 130,433,243)(130,546,736 - 130,547,577)
sequence
gaattccacctgacaggaaaataaatccccaatgaaaagcattgccagag
gccattgaccaccacccaccccagagcacaaggtctccatgtgatgctga
gatctgcaggaacttgggctcatgtgtgttgccacatagtcacacactct
gcacatatagctctctactttaagttgtctgaaatcccatatagaaggag
tggaggtcacatgtagcaccccaggattccgtatcatctgctacctttaa
ggtcatctgcgagtataattttttaaaaagcttgccgcaggacattgtgt
ggagctttgaggagaggcacaagctcatcaccagacagccatgggaatac
aagcttcagagtaagaagaagtggcaacctgccagtgcccaggagaacaa
aagatgctgtttagggtagagaaccctggggccacgttaatggttaatag
agaggccactatgccagtgggctgttgtccaaataagattcgattttgca
tggagacagtaagtaaatactacaatcattctaagcataaactttaatat
acatgtattctgagataagatcatatcccaaaacccttttgagaaatagt
gcccgaggtcacaaataaggatggtgctcctattatcttaggctcatttt
ctgatgttctttagaagtgtctttgatatttttttcatttactttcctag
atccctataaagaagcactctgatctgtctcagaatcctagcatcaacat
taagtgatattgaacctaataatctttaaggtaataatgaattcactttt
ataggaaagcagattttcttctcccaagactgttgggtatgtcttaatct
cattagaaaagtatgcagagagcagaaagacaaccccctccccaattttg
ttccccaaaggaagccttaaattccacagttttgggtcatattttttgtt
cttttattatttattctggataactacagaaattagagcttctacaacca
aaatgttgtggacaggaagacaacttggttgggaaagtgcttgagtgaag
tcttagaaactgtggtgaaaaactagcatggtggttatggtgctgaaat
gaattctgttaaaaaaattaaaaggcaataaaaatcttgagcacaacagg
ttacagccagggatatcatgaacacagcaaacaggaacacacagaatcag
cagctgaagagagggtttcatcaagagtgagaaaacacacgcatgcagca
gacacacacagcacacgtgcgtgcacgagtacacacacacagacacacac
acagatacaaacacacacacacacacacacacacacagagagagagagag
agagagagagagagagagagagagagagagagaggagactgcaagaagta
aagggggacacaggaagccaaagcccagcttctctccttgagaactggga
gttttttaaagtctctaaagagttttcttccctaatttagggttggtcag
tttaaagaaggacaggatgaatagttagcccacaagagttctgtaaacac
gtccagacctgacctttaacttgctaatccaacccaccatctgtggaaca
agtagacaaaaaactgggtaggttgagcagatttaagaaaccctggtagt
tctcataattgagaatggtaggcattcgaatttgcttccaaccgcaacac
ccaacataaggactagtcatgtagcatagagcctagagttctccgtgcta
atgagatacctagataacccacccaagagtttagccaaatagcttccctt
tcggacattccttcctacaaaagatatttaatctctggcccaccctgagt
aagctgtatgcaccattttcatcatgaataacagtttagacattcaagac
ctgtctttctcatttagaattgccgggggtgggggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130432139_130433243
seq2: B6Ng01-094K10.b_48_1146

seq1  GAATTCCACCTGACAGGAAAATAAATCCCCAATGAAAAGCATTGCCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTGACAGGAAAATAAATCCCCAATGAAAAGCATTGCCAGAG  50

seq1  GCCATTGACCACCACCCACCCCAGAGCACAAGGTCTCCATGTGATGCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTGACCACCACCCACCCCAGAGCACAAGGTCTCCATGTGATGCTGA  100

seq1  GATCTGCAGGAACTTGGGCTCATGTGTGTTGCCACATAGTCACACACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCAGGAACTTGGGCTCATGTGTGTTGCCACATAGTCACACACTCT  150

seq1  GCACATATAGCTCTCTACTTTAAGTTGTCTGAAATCCCATATAGAAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATATAGCTCTCTACTTTAAGTTGTCTGAAATCCCATATAGAAGGAG  200

seq1  TGGAGGTCACATGTAGCACCCCAGGATTCCGTATCATCTGCTACCTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCACATGTAGCACCCCAGGATTCCGTATCATCTGCTACCTTTAA  250

seq1  GGTCATCTGCGAGTATAATTTTTTAAAAAGCTTGCCGCAGGACATTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCTGCGAGTATAATTTTTTAAAAAGCTTGCCGCAGGACATTGTGT  300

seq1  GGAGCTTTGAGGAGAGGCACAAGCTCATCACCAGACAGCCATGGGAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTTTGAGGAGAGGCACAAGCTCATCACCAGACAGCCATGGGAATAC  350

seq1  AAGCTTCAGAGTAAGAAGAAGTGGCAACCTGCCAGTGCCCAGGAGAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCAGAGTAAGAAGAAGTGGCAACCTGCCAGTGCCCAGGAGAACAA  400

seq1  AAGATGCTGTTTAGGGTAGAGAACCCTGGGGCCACGTTAATGGTTAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTGTTTAGGGTAGAGAACCCTGGGGCCACGTTAATGGTTAATAG  450

seq1  AGAGGCCACTATGCCAGTGGGCTGTTGTCCAAATAAGATTCGATTTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCACTATGCCAGTGGGCTGTTGTCCAAATAAGATTCGATTTTGCA  500

seq1  TGGAGACAGTAAGTAAATACTACAATCATTCTAAGCATAAACTTTAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAGTAAGTAAATACTACAATCATTCTAAGCATAAACTTTAATAT  550

seq1  ACATGTATTCTGAGATAAGATCATATCCCAAAACCCTTTTGAGAAATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATTCTGAGATAAGATCATATCCCAAAACCCTTTTGAGAAATAGT  600

seq1  GCCCGAGGTCACAAATAAGGATGGTGCTCCTATTATCTTAGGCTCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGAGGTCACAAATAAGGATGGTGCTCCTATTATCTTAGGCTCATTTT  650

seq1  CTGATGTTCTTTAGAAGTGTCTTTGATATTTTTTTCATTTACTTTCCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTTCTTTAGAAGTGTCTTTGATATTTTTTTCATTTACTTTCCTAG  700

seq1  ATCCCTATAAAGAAGCACTCTGATCTGTCTCAGAATCCTAGCATCAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTATAAAGAAGCACTCTGATCTGTCTCAGAATCCTAGCATCAACAT  750

seq1  TAAGTGATATTGAACCTAATAATCTTTAAGGTAATAATGAATTCACTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGATATTGAACCTAATAATCTTTAAGGTAATAATGAATTCACTTTT  800

seq1  ATAGGAAAGCAGATTTTCTTCTCCCAAGACTGTT-GGTATGTCTTAATCT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATAGGAAAGCAGATTTTCTTCTCCCAAGACTGTTGGGTATGTCTTAATCT  850

seq1  CATTAGAAAAGTATGCAGAGAGCAGAAAGACAACCCCCTCCCCAATTTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAAAAGTATGCAGAGAGCAGAAAGACAACCCCCTCCCCAATTTTG  900

seq1  TTCCCCAAAGGAAGCCTTAAATTCCACCAGGTTTTGGGTCATATTTTTTG  949
      |||||||||||||||||||||||||||   ||||||||||||||||||||
seq2  TTCCCCAAAGGAAGCCTTAAATTCCAC--AGTTTTGGGTCATATTTTTTG  948

seq1  TTTCTTTTTATTATTTATTCTGGATACCTACAGAAATTAGAGCTTCTACA  999
      ||   ||||||||||||||||||||| |||||||||||||||||||||||
seq2  TT--CTTTTATTATTTATTCTGGATAACTACAGAAATTAGAGCTTCTACA  996

seq1  ACCCAAATTGTTTGTGGACAGGAAGACAACTTGGTTGGGAAAGTGCTTGA  1049
      ||| ||||   |||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAT--GTTGTGGACAGGAAGACAACTTGGTTGGGAAAGTGCTTGA  1044

seq1  GTTGAAGTCTTAGAAACTGTGTGGAAAAACTAGCCATGGTGG-TATGTGC  1098
      | |||||||||||||||||||  |||||||||| |||||||| ||||   
seq2  G-TGAAGTCTTAGAAACTGTGGTGAAAAACTAG-CATGGTGGTTATGGTG  1092

seq1  CTGAAAT  1105
      |||||||
seq2  CTGAAAT  1099

seq1: chr8_130546736_130547577
seq2: B6Ng01-094K10.g_70_912 (reverse)

seq1  --TCCCCCCCCCCACCCCCGGCAATTCTAAATGAGAAAGACAGGTCTTGA  48
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCCCCCCACCCCCGGCAATTCTAAATGAGAAAGACAGGTCTTGA  50

seq1  TTGTCTAAACTGTTTATTCATGATGAAAATGGTGCATACAGCTTACTCAG  98
       ||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAAACTG-TTATTCATGATGAAAATGGTGCATACAGCTTACTCAG  99

seq1  GGTGGGCCAGAGATTAAATATCTTTTGTAGGAAGGAATGTCCGAAAAGGG  148
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGTGGGCCAGAGATTAAATATCTTTTGTAGGAAGGAATGTCCG-AAAGGG  148

seq1  AAGCTATTTGGCTAAACTCTTGGGTGGGTTATCTAGGTATCTCATTAGCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATTTGGCTAAACTCTTGGGTGGGTTATCTAGGTATCTCATTAGCA  198

seq1  CGGAGAACTCTAGGCTCTATGCTACATGACTAGTCCTTATGTTGGGTGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGAACTCTAGGCTCTATGCTACATGACTAGTCCTTATGTTGGGTGTT  248

seq1  GCGGTTGGAAGCAAATTCGAATGCCTACCATTCTCAATTATGAGAACTAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTTGGAAGCAAATTCGAATGCCTACCATTCTCAATTATGAGAACTAC  298

seq1  CAGGGTTTCTT-AATCTGCTCAACCTACCCAGTTTTTTGTCTACTTGTTC  347
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTTAAATCTGCTCAACCTACCCAGTTTTTTGTCTACTTGTTC  348

seq1  CACAGATGGTGGGTTGGATTAGCAAGTTAAAGGTCAGGTCTGGACGTGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATGGTGGGTTGGATTAGCAAGTTAAAGGTCAGGTCTGGACGTGTT  398

seq1  TACAGAACTCTTGTGGGCTAATCAACCATCCTGTCCTTCTTTAAACTGAC  447
      |||||||||||||||||||||  |  ||||||||||||||||||||||||
seq2  TACAGAACTCTTGTGGGCTAACTATTCATCCTGTCCTTCTTTAAACTGAC  448

seq1  CAACCCTAAATTAGGGAAGAAAACTCTTTAGAGACTTTAAAAAACTCCCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTAAATTAGGGAAGAAAACTCTTTAGAGACTTTAAAAAACTCCCA  498

seq1  GTTCTCAAGGAGAGAAGCTGGGCTTTGGCTTCCTGTGTCCCCCTTTACTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAAGGAGAGAAGCTGGGCTTTGGCTTCCTGTGTCCCCCTTTACTT  548

seq1  CTTGCAGTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  598

seq1  TCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTATCTGTGTGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTATCTGTGTGTG  648

seq1  TGTCTGTGTGTGTGTACTCGTGCACGCACGTGTGCTGTGTGTGTCTGCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGTGTGTGTACTCGTGCACGCACGTGTGCTGTGTGTGTCTGCTG  698

seq1  CATGCGTGTGTTTTCTCACTCTTGATGAAACCCTCTCTTCAGCTGCTGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGTGTGTTTTCTCACTCTTGATGAAACCCTCTCTTCAGCTGCTGAT  748

seq1  TCTGTGTGTTCCTGTTTGCTGTGTTCATGATATCCCTGGCTGTAACCTGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTTCCTGTTTGCTGTGTTCATGATATCCCTGGCTGTAACCTGT  798

seq1  TGTGCTCAAGATTTTTATTGCCTTTTAATTTTTTTAACAGAATTC  842
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCAAGATTTTTATTGCCTTTTAATTTTTTTAACAGAATTC  843