BAC Information

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BAC

Clone NameB6Ng01-095H24
Chromosome8 (Build37)
Map Location 112,253,364 - 112,403,550
singlet/doubletdoublet
Overlap geneD8Ertd587e, LOC668089, LOC672735, Ap1g1, Phlppl
Upstream geneAtbf1, 4922502B01Rik, Gm1943, LOC100042829, Pmfbp1, Dhx38, Txnl4b, Hp, Dhodh, Pkd1l3, 2400003C14Rik, 4930566A11Rik
Downstream geneMarveld3, LOC100041884, Tat, Chst4, Zfp612, Gm1467, Calb2, BC025546, Hydin, LOC672398, Vac14, BC060632, 2010004A03Rik, Sf3b3, Cog4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095H24.bB6Ng01-095H24.g
ACCDH906427DH906428
length1,0811,042
definitionDH906427|Mus musculus domesticus DNA, BAC clone: B6Ng01-095H24, 5' end.DH906428|Mus musculus domesticus DNA, BAC clone: B6Ng01-095H24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,253,364 - 112,254,447)(112,402,508 - 112,403,550)
sequence
gaattcctcaagactcaatcccacaggcccccgctgtaggaaacaagcca
gagaagcagcagagaaatgggggcaacacagggaaaggatgtgatctcca
atgcagcacaaggtcggtggttgattctgacagaaagcagagacttcagt
acttgcggtcaggctaaacagcttcctttgaacgcccccccctaaaagct
cgctgaccaggtatctgctctcaaggtatcaaacagaatgtaggatttat
agcaaactagccagtttcttgtcactctgttcccaaagagaacaaccttt
agcacctgaacactaagaatgacttcgttctcagaactccccccccccca
ggaggtaggtaagattatttatccccatttggcagctggggaggaagtga
aagagatatcacaagactcaccttaagctttgctcatacttcagaagtgt
aggactcctggtgacaggccaggtctatctatgaaggaaatgccacactc
attccctgggagaagtctaactacatagctgggtggacaataccctgagt
tgccttcaagagtctaaagaacccctccccaccccatcccaaaaaacctt
cacaaaaaaattactcaaccactttaaagttggtgggggtggggggagcc
taaatcctaatacccaatggggccctacagtccacgctgacactactatg
ggctgtagggaaatgtgggaataagacagatggcagcaaaaacaaccaag
atagaaaatactttctagaagaatccaccagcatacaaggacacatctgc
ttagatgttacaaagactattcctagacctttcagagctgatactgggag
ggcgcaacttaagcccggaatgctgagaggcaattgggattgcagtggga
aggaagccgagttagtccactgccgtgggaatgcccagcctaggctcagt
ttcttttctggtttcttcactatatggctgccgtggaagaggacatgatt
tgagttcttaaattataaaattatagctggataggtactagggaccttta
acaaaaactaaggtctagtggactaaggcag
gaattcaaggctaacctcagctacaggagaccctgtctcagaaagaacca
gaaaacctcctattcaacttccagtaggattagaaaaggattgtctttgg
aaagctgacgtcaggagtctcttactttaaaactgccaacaaagtctaga
agcacctctcagtgtacagtgtttgtctaatatggttgaggccttgagct
taaatccagaaacgtaaataaataaatgaacaaacaaacaaataattggt
atttttttataagcaggttcagctcatgcaaaagtatgtatctacactta
catataaaacttaatactaacattttggagaaagtaaagaaaaaatgggt
atattttatattttatttctgggattttttttaattaaaaaaataaggag
cctggcagtggtggcccatgcctttaatcccaccactcaggaggcagagg
caggtggatttctgagttcgaggccatcctggtctacaaagtgagttcca
ggacagccagggctatacagagaaaccctgtcttgaaagacaaaaaaaat
aaggacttatttttgtacacggatgttttgccagcatggatgtctgtgta
ccatgtgtaccatgtgtgcctgatgctcaaggcagccagaagaggatgct
gagtccccgagactggagttacagatgtttgagaattaccatatcagtgc
taggaactgaacctagatcctccagaaaggcagctaggtgttcttagcta
ctcaacctctctctagcccagtattttttctattttagatgggaatataa
ccttttatgaagggagttgaagatatctatcaaaattataaatgggtcat
attcttttgaccgaggataactgtacttctatgggctcaccctccagaga
acccctctgtgtgaggtaaaagatacagaggaagtcatctgtggcgctgt
ttgctgtgctaacactggtagcaggcgatattccataatgagattaggga
aatagctaaattatgtagctcataaagtagattggtcatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_112253364_112254447
seq2: B6Ng01-095H24.b_47_1127

seq1  GAATTCCTCAAGACTCAATCCCACAGGCCCCCGCTGTAGGAAACAAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAAGACTCAATCCCACAGGCCCCCGCTGTAGGAAACAAGCCA  50

seq1  GAGAAGCAGCAGAGAAATGGGGGCAACACAGGGAAAGGATGTGATCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCAGCAGAGAAATGGGGGCAACACAGGGAAAGGATGTGATCTCCA  100

seq1  ATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTCAGT  150

seq1  ACTTGCGGTCAGGCTAAACAGCTTCCTTTGAACGCCCCCCCCTAAAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCGGTCAGGCTAAACAGCTTCCTTTGAACGCCCCCCCCTAAAAGCT  200

seq1  CGCTGACCAGGTATCTGCTCTCAAGGTATCAAACAGAATGTAGGATTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGACCAGGTATCTGCTCTCAAGGTATCAAACAGAATGTAGGATTTAT  250

seq1  AGCAAACTAGCCAGTTTCTTGTCACTCTGTTCCCAAAGAGAACAACCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACTAGCCAGTTTCTTGTCACTCTGTTCCCAAAGAGAACAACCTTT  300

seq1  AGCACCTGAACACTAAGAATGACTTCGTTCTCAGAACTCCCCCCCCCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTGAACACTAAGAATGACTTCGTTCTCAGAACTCCCCCCCCCCCA  350

seq1  GGAGGTAGGTAAGATTATTTATCCCCATTTGGCAGCTGGGGAGGAAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAGGTAAGATTATTTATCCCCATTTGGCAGCTGGGGAGGAAGTGA  400

seq1  AAGAGATATCACAAGACTCACCTTAAGCTTTGCTCATACTTCAGAAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATATCACAAGACTCACCTTAAGCTTTGCTCATACTTCAGAAGTGT  450

seq1  AGGACTCCTGGTGACAGGCCAGGTCTATCTATGAAGGAAATGCCACACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCCTGGTGACAGGCCAGGTCTATCTATGAAGGAAATGCCACACTC  500

seq1  ATTCCCTGGGAGAAGTCTAACTACATAGCTGGGTGGACAATACCCTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTGGGAGAAGTCTAACTACATAGCTGGGTGGACAATACCCTGAGT  550

seq1  TGCCTTCAAGAGTCTAAAGAACCCCTCCCCACCCCATCCCAAAAAACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCAAGAGTCTAAAGAACCCCTCCCCACCCCATCCCAAAAAACCTT  600

seq1  CACAAAAAAATTACTCAACCACTTTAAAGTTGGTGGGGGT-GGGGGAGCC  649
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CACAAAAAAATTACTCAACCACTTTAAAGTTGGTGGGGGTGGGGGGAGCC  650

seq1  TAAATCCTAATACCCAATGGGGCCCTACAGTCCACGCTGACACTACTATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTAATACCCAATGGGGCCCTACAGTCCACGCTGACACTACTATG  700

seq1  GGCTGTAGGGAAATGTGGGAATAAGACAGATGGCAGCAAATACAACCAAG  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGCTGTAGGGAAATGTGGGAATAAGACAGATGGCAGCAAAAACAACCAAG  750

seq1  ATAGAAAATACTTTCTAGAAGAATCCACCAGCATACAAGGACACATCTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAATACTTTCTAGAAGAATCCACCAGCATACAAGGACACATCTGC  800

seq1  TAAGATGTTACAAAGACTATTCCTAGA-CTTTCAGAGCTGATACTGGGAG  848
      | ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTAGATGTTACAAAGACTATTCCTAGACCTTTCAGAGCTGATACTGGGAG  850

seq1  GGCGCAACTT-AGGCCGGAATGCTGAGAGGCAAT--GGATTGCAGTGGG-  894
      |||||||||| || ||||||||||||||||||||  ||||||||||||| 
seq2  GGCGCAACTTAAGCCCGGAATGCTGAGAGGCAATTGGGATTGCAGTGGGA  900

seq1  AGGAAGCCGAGTAGGTCCACTGCAGTGGGAATGCCCAGCCTAGGGCTCAG  944
      ||||||||||||  ||||||||| |||||||||||||||||| |||||||
seq2  AGGAAGCCGAGTTAGTCCACTGCCGTGGGAATGCCCAGCCTA-GGCTCAG  949

seq1  TTTC-TTTCTGGTTTCTCCACTATATTGCTGCCGGTGGAAGAGGACATGA  993
      |||| |||||||||||| |||||||| |||||| ||||||||||||||||
seq2  TTTCTTTTCTGGTTTCTTCACTATATGGCTGCC-GTGGAAGAGGACATGA  998

seq1  TTTTGAGTTTCTAAATATAAAAATTATAGCT-GATAGGGAAACCAGGGAC  1042
       ||||||||  |||||   |||||||||||| ||||||   || ||||||
seq2  -TTTGAGTTCTTAAATTATAAAATTATAGCTGGATAGG--TACTAGGGAC  1045

seq1  CCTTTTACACCAAAAACTAGAGGTCTTAGTGGACAAAGGCAG  1084
      | ||    | ||||||||| ||||| |||||||| |||||||
seq2  CTTT----AACAAAAACTA-AGGTC-TAGTGGACTAAGGCAG  1081

seq1: chr8_112402508_112403550
seq2: B6Ng01-095H24.g_69_1110 (reverse)

seq1  TACATGACTATTCTACTTTATGGGCTACCATAATTTTAGCTAATTTCCCT  50
      |||||||| | ||||||||||| |||| ||||| ||||||| ||||||||
seq2  TACATGACCAATCTACTTTATGAGCTA-CATAA-TTTAGCT-ATTTCCCT  47

seq1  AATCTCATTATGG-ATATCCGCCTGCTACCAGTTGTTAGCACAGCAAACA  99
      ||||||||||||| |||| ||||||||||||| |||||||||||||||||
seq2  AATCTCATTATGGAATAT-CGCCTGCTACCAG-TGTTAGCACAGCAAACA  95

seq1  GCGCCACAGATGACTTCCTCTGTATCTTTTACCTCACACAGAGGGGTTTC  149
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCGCCACAGATGACTTCCTCTGTATCTTTTACCTCACACAGAGGGG-TTC  144

seq1  TCTGGAGGGTGAGCCCATAGAAGTACAGTTATCCTCGGTCAAAGGAATAT  199
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTGGAGGGTGAGCCCATAGAAGTACAGTTATCCTCGGTCAAAAGAATAT  194

seq1  GA-CCATTTATAATTTTGATAGATATCTTCAACT-CCTTCAT-AAAGGTT  246
      || ||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  GACCCATTTATAATTTTGATAGATATCTTCAACTCCCTTCATAAAAGGTT  244

seq1  ATATTCCCATCTAAAATAG-AAAAATACTGGGCTAGAGAGAGGTTGAGTA  295
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATATTCCCATCTAAAATAGAAAAAATACTGGGCTAGAGAGAGGTTGAGTA  294

seq1  GCTAAGAACACCTAGCTGCCTTTCTGGAGGATCTAGGTTCAGTTCCTAGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAACACCTAGCTGCCTTTCTGGAGGATCTAGGTTCAGTTCCTAGC  344

seq1  ACTGATATGGTAATTCTCAAACATCTGTAACTCCAGTCTCGGGGACTCAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATATGGTAATTCTCAAACATCTGTAACTCCAGTCTCGGGGACTCAG  394

seq1  CATCCTCTTCTGGCTGCCTTGAGCATCAGGCACACATGGTACACATGGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTTCTGGCTGCCTTGAGCATCAGGCACACATGGTACACATGGTA  444

seq1  CACAGACATCCATGCTGGCAAAACATCCGTGTACAAAAATAAGTCCTTAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACATCCATGCTGGCAAAACATCCGTGTACAAAAATAAGTCCTTAT  494

seq1  TTTTTTTGTCTTTCAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTCTTTCAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTG  544

seq1  GAACTCACTTTGTAGACCAGGATGGCCTCGAACTCAGAAATCCACCTGCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACTTTGTAGACCAGGATGGCCTCGAACTCAGAAATCCACCTGCC  594

seq1  TCTGCCTCCTGAGTGGTGGGATTAAAGGCATGGGCCACCACTGCCAGGCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCTGAGTGGTGGGATTAAAGGCATGGGCCACCACTGCCAGGCT  644

seq1  CCTTATTTTTTTAATTAAAAAAAATCCCAGAAATAAAATATAAAATATAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTTTTTAATTAAAAAAAATCCCAGAAATAAAATATAAAATATAC  694

seq1  CCATTTTTTCTTTACTTTCTCCAAAATGTTAGTATTAAGTTTTATATGTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTCTTTACTTTCTCCAAAATGTTAGTATTAAGTTTTATATGTA  744

seq1  AGTGTAGATACATACTTTTGCATGAGCTGAACCTGCTTATAAAAAAATAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGATACATACTTTTGCATGAGCTGAACCTGCTTATAAAAAAATAC  794

seq1  CAATTATTTGTTTGTTTGTTCATTTATTTATTTACGTTTCTGGATTTAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATTTGTTTGTTTGTTCATTTATTTATTTACGTTTCTGGATTTAAG  844

seq1  CTCAAGGCCTCAACCATATTAGACAAACACTGTACACTGAGAGGTGCTTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGCCTCAACCATATTAGACAAACACTGTACACTGAGAGGTGCTTC  894

seq1  TAGACTTTGTTGGCAGTTTTAAAGTAAGAGACTCCTGACGTCAGCTTTCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTTGTTGGCAGTTTTAAAGTAAGAGACTCCTGACGTCAGCTTTCC  944

seq1  AAAGACAATCCTTTTCTAATCCTACTGGAAGTTGAATAGGAGGTTTTCTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAATCCTTTTCTAATCCTACTGGAAGTTGAATAGGAGGTTTTCTG  994

seq1  GTTCTTTCTGAGACAGGGTCTCCTGTAGCTGAGGTTAGCCTTGAATTC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCTGAGACAGGGTCTCCTGTAGCTGAGGTTAGCCTTGAATTC  1042