BAC Information

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BAC

Clone NameB6Ng01-096F01
Chromosome8 (Build37)
Map Location 124,639,880 - 124,723,509
singlet/doubletdoublet
Overlap genenone
Upstream geneFoxc2, Foxl1, 1700018B08Rik, Fbxo31, Map1lc3b, Zcchc14, Jph3, Klhdc4, Slc7a5, BC048644, Car5a, Banp
Downstream geneGm22, Zfpm1, Trhr2, 5830416A07Rik, Il17c, Cyba, Mvd, Snai3, Rnf166, 2310061F22Rik, Cdt1, Aprt, Galns, Trappc2l, Pabpnl1, Cbfa2t3h, C230057M02Rik, A530010L16Rik, BC021611, LOC100043225, Cdh15, Ankrd11, Spg7, Rpl13, Cpne7, Sult5a1, LOC100043251, Dpep1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096F01.bB6Ng01-096F01.g
ACCDH907009DH907010
length1,154164
definitionDH907009|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F01, 5' end.DH907010|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,722,343 - 124,723,509)(124,639,880 - 124,640,043)
sequence
gaattccatgccaccctcatggtgggatttcctctactgatgtgacctac
tcgtggtcccgtaggtagacctgtctggtttgtctgtcacagtctgacca
gtagctggggtggcaggaaaacaccagtgatgagataggaagatgggctc
tggcttggagccagccgtctgtcaggaggccatggggccttggcatgtgg
ctacccatcttgtcacttcttaaaagacgccgctgcttcaagtgaccccg
tgtaagggttcaagccagagtccgcagggaggggctctgagggagctgac
actgtgtcccagtgaggtctgccagagctcagcatctctgacctagagat
cagtgggcaagaataatggggtcccaccctctacggccacagcctccctg
gaggcaccctgtaaacgaaaccagaatctacgtcccaccctctgcccagc
tcctgaagctggcctgtccctgtactcccaaggccaactggatggagcca
agaattctaggccctggagatgtcagcctgggtaccaacaaagaaaaagt
agaaatggaataaaaattcttttttaatggtctcggctgctaaactcggc
agtgcagccagaaatctgaatggcgagcccacggcgcagccttccaaaaa
ctccacctcacacaccgtgcttcatccaagattaatgggagcagatggag
ttgctttcctgtgttcctttcagggcaacgaggtgccagtcatcagggcc
atgctggagagggggcagatcggtgggggagcgggccagtgggacagggg
caaggtcaggaggaacggtggcagactcctctgtgacagacagatgggga
atctagtgcatctatctagtggggtgtattgggccctgggggttctgtgg
gctgatgaactccactgtcattccatgtagctatccctctgtcctttcag
agctcacttcactgtcagcagtgtgaagctgcctgtccagcacccagcag
gagaaagctgtagaagatgtagtaatccgtgaggtcctgtggatgcacat
gaaactagagtgtccccggtgtggctgagaagcaagtgaccaagcctaga
agtgcacgtcattccttagaatctatcctgtctgcattggacccgaagcc
aaga
cttacccgacccccaagcatgggaggattggggcctcagagctcagcata
ggtccccctccctgaccttctgtccctcccctgccagcgcatcatcgtca
cactgtgtcccatgtttaattttcacaggggcccaccagggcggagtggg
ggtggggaggtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_124722343_124723509
seq2: B6Ng01-096F01.b_46_1199 (reverse)

seq1  TCTTGGCTTCTGGGCCCATTGCAGAGCAGGATAGATTCTCAGGGATGACC  50
      |||||||||| ||| ||| |||||| ||||||||||||| ||| |||| |
seq2  TCTTGGCTTC-GGGTCCAATGCAGA-CAGGATAGATTCTAAGGAATGA-C  47

seq1  GTGCACTCTTAGGCCTGGGTCACCTGCCTTCTCCAGCCACA-CGGGGACA  99
      |||||||  |||| || |||||| || ||||| |||||||| ||||||||
seq2  GTGCACTTCTAGG-CTTGGTCACTTG-CTTCT-CAGCCACACCGGGGACA  94

seq1  CTCTAGTGTCATGTGCATCCCACAGGGGACCTCACGGATTACTACAATCT  149
      ||||||| |||||||||| |||||  ||||||||||||||||||| ||||
seq2  CTCTAGTTTCATGTGCAT-CCACA--GGACCTCACGGATTACTAC-ATCT  140

seq1  TCTAACAGCTTTCTCCTGGCTGGGTGCTGGCCAGGCAGCCTTCCACACTG  199
      ||| ||||||||||||| |||||||||||| ||||||||  | |||||||
seq2  TCT-ACAGCTTTCTCCT-GCTGGGTGCTGGACAGGCAGC--TTCACACTG  186

seq1  CTGACAGTGAAGTGAGCTCTGGAAGGACAGAGGGATAGCTACATGGAATG  249
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTGACAGTGAAGTGAGCTCTGAAAGGACAGAGGGATAGCTACATGGAATG  236

seq1  ACAGTGGAGTTCATCAGCCCACAGAACCCCCAGGGCCCAATACACCCCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGAGTTCATCAGCCCACAGAACCCCCAGGGCCCAATACACCCCAC  286

seq1  TAGATAGATGCACTAGATTCCCCATCTGTCTGTCACAGAGGAGTCTGCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATGCACTAGATTCCCCATCTGTCTGTCACAGAGGAGTCTGCCA  336

seq1  CCGTTCCTCCTGACCTTGCCCCTGTCCCACTGGCCCGCTCCCCCACCGAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCCTCCTGACCTTGCCCCTGTCCCACTGGCCCGCTCCCCCACCGAT  386

seq1  CTGCCCCCTCTCCAGCATGGCCCTGATGACTGGCACCTCGTTGCCCTGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCTCTCCAGCATGGCCCTGATGACTGGCACCTCGTTGCCCTGAA  436

seq1  AGGAACACAGGAAAGCAACTCCATCTGCTCCCATTAATCTTGGATGAAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACACAGGAAAGCAACTCCATCTGCTCCCATTAATCTTGGATGAAGC  486

seq1  ACGGTGTGTGAGGTGGAGTTTTTGGAAGGCTGCGCCGTGGGCTCGCCATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTGTGTGAGGTGGAGTTTTTGGAAGGCTGCGCCGTGGGCTCGCCATT  536

seq1  CAGATTTCTGGCTGCACTGCCGAGTTTAGCAGCCGAGACCATTAAAAAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCTGGCTGCACTGCCGAGTTTAGCAGCCGAGACCATTAAAAAAG  586

seq1  AATTTTTATTCCATTTCTACTTTTTCTTTGTTGGTACCCAGGCTGACATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTATTCCATTTCTACTTTTTCTTTGTTGGTACCCAGGCTGACATC  636

seq1  TCCAGGGCCTAGAATTCTTGGCTCCATCCAGTTGGCCTTGGGAGTACAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGCCTAGAATTCTTGGCTCCATCCAGTTGGCCTTGGGAGTACAGG  686

seq1  GACAGGCCAGCTTCAGGAGCTGGGCAGAGGGTGGGACGTAGATTCTGGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCCAGCTTCAGGAGCTGGGCAGAGGGTGGGACGTAGATTCTGGTT  736

seq1  TCGTTTACAGGGTGCCTCCAGGGAGGCTGTGGCCGTAGAGGGTGGGACCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTACAGGGTGCCTCCAGGGAGGCTGTGGCCGTAGAGGGTGGGACCC  786

seq1  CATTATTCTTGCCCACTGATCTCTAGGTCAGAGATGCTGAGCTCTGGCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTCTTGCCCACTGATCTCTAGGTCAGAGATGCTGAGCTCTGGCAG  836

seq1  ACCTCACTGGGACACAGTGTCAGCTCCCTCAGAGCCCCTCCCTGCGGACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACTGGGACACAGTGTCAGCTCCCTCAGAGCCCCTCCCTGCGGACT  886

seq1  CTGGCTTGAACCCTTACACGGGGTCACTTGAAGCAGCGGCGTCTTTTAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGAACCCTTACACGGGGTCACTTGAAGCAGCGGCGTCTTTTAAG  936

seq1  AAGTGACAAGATGGGTAGCCACATGCCAAGGCCCCATGGCCTCCTGACAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACAAGATGGGTAGCCACATGCCAAGGCCCCATGGCCTCCTGACAG  986

seq1  ACGGCTGGCTCCAAGCCAGAGCCCATCTTCCTATCTCATCACTGGTGTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTGGCTCCAAGCCAGAGCCCATCTTCCTATCTCATCACTGGTGTTT  1036

seq1  TCCTGCCACCCCAGCTACTGGTCAGACTGTGACAGACAAACCAGACAGGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCACCCCAGCTACTGGTCAGACTGTGACAGACAAACCAGACAGGT  1086

seq1  CTACCTACGGGACCACGAGTAGGTCACATCAGTAGAGGAAATCCCACCAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTACGGGACCACGAGTAGGTCACATCAGTAGAGGAAATCCCACCAT  1136

seq1  GAGGGTGGCATGGAATTC  1167
      ||||||||||||||||||
seq2  GAGGGTGGCATGGAATTC  1154

seq1: chr8_124639880_124640043
seq2: B6Ng01-096F01.g_73_236

seq1  CTTACCCGACCCCCAAGCATGGGAGGATTGGGGCCTCAGAGCTCAGCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCCGACCCCCAAGCATGGGAGGATTGGGGCCTCAGAGCTCAGCATA  50

seq1  GGTCCCCCTCCCTGACCTTCTGTCCCTCCCCTGCCAGCGCATCATCGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCCTCCCTGACCTTCTGTCCCTCCCCTGCCAGCGCATCATCGTCA  100

seq1  CACTGTGTCCCATGTTTAATTTTCACAGGGGCCCACCAGGGCGGAGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTCCCATGTTTAATTTTCACAGGGGCCCACCAGGGCGGAGTGGG  150

seq1  GGTGGGGAGGTGAA  164
      ||||||||||||||
seq2  GGTGGGGAGGTGAA  164