BAC Information

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BAC

Clone NameB6Ng01-096J03
Chromosome8 (Build37)
Map Location 49,341,146 - 49,455,026
singlet/doubletdoublet
Overlap geneOdz3
Upstream geneStox2, 4930448N21Rik, D030016E14Rik, Rwdd4a, LOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd
Downstream gene2900073C17Rik, LOC100039866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096J03.bB6Ng01-096J03.g
ACCDH907182DH907183
length1,084659
definitionDH907182|Mus musculus domesticus DNA, BAC clone: B6Ng01-096J03, 5' end.DH907183|Mus musculus domesticus DNA, BAC clone: B6Ng01-096J03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,453,934 - 49,455,026)(49,341,146 - 49,341,804)
sequence
gaattctaaagcctatatcttaatccgtgaaaatcggagctttaaagaga
atctttggaagaccaaagtttaaacaaggagtatgcatttatgcatatat
aacagatgcagcatagacatcactctgtgtttattatatttcttactaac
attgtgcatttgtggcagatgttattaacaggacaacttcctgaaattat
taatatttttaaaacatcccatctatcacacataataatgatagactttt
actcagctgcttttcatatattatactgatggagtcatttattaataata
tgcatgtactgcatatttattcatttaaactttattttgtatttactttt
tcaaaaactactatcttacctacaaaagtatttccttagattctgaattt
tcagaagctggaagtatcgctcattttaattcattgatttcacagataat
tactgaagtgtaccaggtatcattagtcccgaacttaacccaaacccatg
tcacacagcacatgtggccttgtaactccagttcccaaagatccagtgtc
ctctgtagactagggacacttccaggcgtgtgcatacacacactacacat
acatacacgtcattttagaataaaaaccctttaaacttaaagacatcatc
agcacagcctggatagtcttcccccagatgtccatctccaccatcttgaa
tgatgcgatggatttccagggagttggcacctttgtgtagttgaatggga
tgcttattgaaaggcgccaaggcctggttaggcaacaccaaatgtgtcca
tagtgtgaaatctagagaacataaataaaatacttatagaggaaaaaaca
tcctgctgaatgccaactataattcttatactctgtcgataaatttttac
atccacggacagtgctctttgccctggtgttttggttttgggtttggttt
ttttgtttgtttgtttgtttggtttgatttttttacatactaatggatat
gtacagttctctatcggagtcagtatccacttaccttaagatgctttctt
ggaacacaagcttctcagtccttgtcaattctag
gaattcactttgtagaccaggctggtctcaaactcagaaatccacctgcc
tctgcctcctgagtgctgggattaaaggcgtgcaccaccacgcctggctc
caaaactaactcttaagaaaagagatccacccagtgttttgtctaagaaa
aacctttcatattaatagactagtgcctctgtctctgtggaaggctttgg
aatgatataggaccatttgatgcttgcagaggttgcctgatgggtaagtt
tttaaaaagaaaaaaaaaaaacaatcaatcaggcacaagtaatccaaacc
aaacccaagcaaagtaagagaggcttaacgcaggactagcaattattcca
agctgtgaaagagttcagatattatataaatagcgtcttgggatgtgagg
gtaaaattaccatcatatgtggcttcgaataccacatcacagtggattac
agcaccccacacctcaagtcactgtagtgaggtgtcagaggggagggcag
gttctcagaaactgctgagtgacaccaaaatggtgggcttacacatatca
agagctgaaattaagttgctgtattaaattagaattgaaaagggcatttt
caaggttactattatttgcatgtgtgagagtgtatgtgtatgagtgtgtg
taagtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49453934_49455026
seq2: B6Ng01-096J03.b_44_1127 (reverse)

seq1  CTAGAATTGACAAGTGACTGGAGAAGACTGGTGTTCCCAGAAAGCATCTT  50
      |||||||||||||| |||| |||||| || ||||||| ||||||||||||
seq2  CTAGAATTGACAAG-GACT-GAGAAG-CTTGTGTTCCAAGAAAGCATCTT  47

seq1  AAAGGTAGTGTGATAACTGACTCTGATAGAGAACTGTTACATATCCAATT  100
      || |  |||| ||| |||||||| |||||||||||| ||||||||| |||
seq2  AAGGTAAGTG-GAT-ACTGACTCCGATAGAGAACTG-TACATATCC-ATT  93

seq1  AGTATTGTAAAAAAATCAAACCAAACAAACAAACAAACAAAAAAACCAAA  150
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTA-TGTAAAAAAATCAAACCAAACAAACAAACAAACAAAAAAACC-AA  141

seq1  ACCAAAAACCAAAACACCAGGGCAAAGAGCACTGTCCGTGGATGTAAAAA  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAACCAAAACACCAGGGCAAAGAGCACTGTCCGTGGATGTAAAAA  191

seq1  TTTATCGACAGAGTATAAGAATTATAGTTGGCATTCAGCAGGATGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCGACAGAGTATAAGAATTATAGTTGGCATTCAGCAGGATGTTTTT  241

seq1  TCCTCTATAAGTATTTTATTTATGTTCTCTAGATTTCACACTATGGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTATAAGTATTTTATTTATGTTCTCTAGATTTCACACTATGGACAC  291

seq1  ATTTGGTGTTGCCTAACCAGGCCTTGGCGCCTTTCAATAAGCATCCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTGTTGCCTAACCAGGCCTTGGCGCCTTTCAATAAGCATCCCATT  341

seq1  CAACTACACAAAGGTGCCAACTCCCTGGAAATCCATCGCATCATTCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACACAAAGGTGCCAACTCCCTGGAAATCCATCGCATCATTCAAGA  391

seq1  TGGTGGAGATGGACATCTGGGGGAAGACTATCCAGGCTGTGCTGATGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGATGGACATCTGGGGGAAGACTATCCAGGCTGTGCTGATGATG  441

seq1  TCTTTAAGTTTAAAGGGTTTTTATTCTAAAATGACGTGTATGTATGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGTTTAAAGGGTTTTTATTCTAAAATGACGTGTATGTATGTGTA  491

seq1  GTGTGTGTATGCACACGCCTGGAAGTGTCCCTAGTCTACAGAGGACACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTATGCACACGCCTGGAAGTGTCCCTAGTCTACAGAGGACACTG  541

seq1  GATCTTTGGGAACTGGAGTTACAAGGCCACATGTGCTGTGTGACATGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTGGGAACTGGAGTTACAAGGCCACATGTGCTGTGTGACATGGGT  591

seq1  TTGGGTTAAGTTCGGGACTAATGATACCTGGTACACTTCAGTAATTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTAAGTTCGGGACTAATGATACCTGGTACACTTCAGTAATTATCT  641

seq1  GTGAAATCAATGAATTAAAATGAGCGATACTTCCAGCTTCTGAAAATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATCAATGAATTAAAATGAGCGATACTTCCAGCTTCTGAAAATTCA  691

seq1  GAATCTAAGGAAATACTTTTGTAGGTAAGATAGTAGTTTTTGAAAAAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTAAGGAAATACTTTTGTAGGTAAGATAGTAGTTTTTGAAAAAGTA  741

seq1  AATACAAAATAAAGTTTAAATGAATAAATATGCAGTACATGCATATTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAAATAAAGTTTAAATGAATAAATATGCAGTACATGCATATTATT  791

seq1  AATAAATGACTCCATCAGTATAATATATGAAAAGCAGCTGAGTAAAAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGACTCCATCAGTATAATATATGAAAAGCAGCTGAGTAAAAGTC  841

seq1  TATCATTATTATGTGTGATAGATGGGATGTTTTAAAAATATTAATAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTATTATGTGTGATAGATGGGATGTTTTAAAAATATTAATAATTT  891

seq1  CAGGAAGTTGTCCTGTTAATAACATCTGCCACAAATGCACAATGTTAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTTGTCCTGTTAATAACATCTGCCACAAATGCACAATGTTAGTA  941

seq1  AGAAATATAATAAACACAGAGTGATGTCTATGCTGCATCTGTTATATATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATAATAAACACAGAGTGATGTCTATGCTGCATCTGTTATATATG  991

seq1  CATAAATGCATACTCCTTGTTTAAACTTTGGTCTTCCAAAGATTCTCTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATGCATACTCCTTGTTTAAACTTTGGTCTTCCAAAGATTCTCTTT  1041

seq1  AAAGCTCCGATTTTCACGGATTAAGATATAGGCTTTAGAATTC  1093
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCCGATTTTCACGGATTAAGATATAGGCTTTAGAATTC  1084

seq1: chr8_49341146_49341804
seq2: B6Ng01-096J03.g_68_726

seq1  GAATTCACTTTGTAGACCAGGCTGGTCTCAAACTCAGAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGTCTCAAACTCAGAAATCCACCTGCC  50

seq1  TCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGCACCACCACGCCTGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGCACCACCACGCCTGGCTC  100

seq1  CAAAACTAACTCTTAAGAAAAGAGATCCACCCAGTGTTTTGTCTAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTAACTCTTAAGAAAAGAGATCCACCCAGTGTTTTGTCTAAGAAA  150

seq1  AACCTTTCATATTAATAGACTAGTGCCTCTGTCTCTGTGGAAGGCTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTCATATTAATAGACTAGTGCCTCTGTCTCTGTGGAAGGCTTTGG  200

seq1  AATGATATAGGACCATTTGATGCTTGCAGAGGTTGCCTGATGGGTAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATAGGACCATTTGATGCTTGCAGAGGTTGCCTGATGGGTAAGTT  250

seq1  TTTAAAAAGAAAAAAAAAAAACAATCAATCAGGCACAAGTAATCCAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGAAAAAAAAAAAACAATCAATCAGGCACAAGTAATCCAAACC  300

seq1  AAACCCAAGCAAAGTAAGAGAGGCTTAACGCAGGACTAGCAATTATTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAAGCAAAGTAAGAGAGGCTTAACGCAGGACTAGCAATTATTCCA  350

seq1  AGCTGTGAAAGAGTTCAGATATTATATAAATAGCGTCTTGGGATGTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGAAAGAGTTCAGATATTATATAAATAGCGTCTTGGGATGTGAGG  400

seq1  GTAAAATTACCATCATATGTGGCTTCGAATACCACATCACAGTGGATTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTACCATCATATGTGGCTTCGAATACCACATCACAGTGGATTAC  450

seq1  AGCACCCCACACCTCAAGTCACTGTAGTGAGGTGTCAGAGGGGAGGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCCACACCTCAAGTCACTGTAGTGAGGTGTCAGAGGGGAGGGCAG  500

seq1  GTTCTCAGAAACTGCTGAGTGACACCAAAATGGTGGGCTTACACATATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGAAACTGCTGAGTGACACCAAAATGGTGGGCTTACACATATCA  550

seq1  AGAGCTGAAATTAAGTTGCTGTATTAAATTAGAATTGAAAAGGGCATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGAAATTAAGTTGCTGTATTAAATTAGAATTGAAAAGGGCATTTT  600

seq1  CAAGGTTACTATTATTTGCATGTGTGAGAGTGTATGTGTATGAGTGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTACTATTATTTGCATGTGTGAGAGTGTATGTGTATGAGTGTGTG  650

seq1  TAAGTGTGT  659
      |||||||||
seq2  TAAGTGTGT  659