BAC Information

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BAC

Clone NameB6Ng01-097L20
Chromosome8 (Build37)
Map Location 58,138,372 - 58,139,524
singlet/doubletsinglet
Overlap genenone
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356
Downstream geneLOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097L20.bB6Ng01-097L20.g
ACCDH908026DH908027
length1,1621,070
definitionDH908026|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L20, 5' end.DH908027|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctccttatgcaaatgaggcatctcagcaccctgaccccaactga
tgatgtatacttaccacaacagccagtactcatcctccaaaagaattaaa
tagttgttgttccaccgaagcctgtcttcctagagtctgttcttgtctgt
actcactatcagtctgaggtccccatcccatggtcattctgccttgcgtc
cccactaagagtctcctggctgtgactgcaggccagtcatactgctatgg
atggagaagcacagccaaaacgacaatgtgtggcatcctggagcagaaga
tataataacatgcatttttcacttcacagcagtcaaaaagcaaaaagaaa
gtctcttcaaaggtacaccagtgagataactttctcttacaaagcctttt
ctaaattttccatgtctaaactggccattttcaaaggacagccatgagct
agagagcctactttcgaaatatggcctttgggatgacctataacacctca
gagcctgactataacctctgctcttgatcatccatcagcccccagaagca
gagatggccaaccatatgcttctttcataattggacttctgaaaatatta
aaacaatcaccccatgtgctgcctcccatccttaaaggaggaaagcatgt
agctaagtatgcaaacaagaaaaaaatataaagtctaaagtaccttgttt
cataattcaccctccagcagctgagtagttcaagtcagtttgggcagaaa
ggttagagggttacctggccctagtgaacacacaatcttcactgtcttca
gcatatccggaagggtataggtgtattcccagccctgaaaaagcttcctt
gcatctgttccaaagcctaggccattttccaagagcttatgttatagcaa
gtttctgctctggttattagctgccagaacagggtcattgttcacttttt
cctcatttcacttaggcacagaggagagggcaggctgtcttgagtccacc
agaactgagcccattaaccacaactcaaaacggatagatttagaataagg
acaccttcattgaattcagatgcgatggccttctgcaggagacggtgggt
ctacaggaatactgggaggaggacaacacattacaaggtattgtgtgtcc
ttactgtcaaac
gaattcctttggagatgaacagcagcatggaagtgtaagccgaataaacc
ctttcctccccaactttcttcttggtcatgatgtttgtgcaggaatagaa
tccctgactaagaaaaattgctaccagcagagtggggtattcctgtgaca
acctgaccatgtttgggaaggactgtggaaggaatttggaactttgggct
taaagatccatttgttgttaagagttctgtcagatgttgtgtaggagctt
ggaagataatgttgagaatagtgcaaaagatggaggtctggtttgtgaaa
tttcagagggaaaattaaagactcttttcagggccattgctgtttttctg
tggttctggttagctggggctgaagaatcagctgtgattaacaagatacc
agaactactaaagcaaaaacttggcattactgggactattgattctggtt
agctggagctaagaaattagtggtgattaagaagagaccagcgtcattga
ggtgacatcttctgggaagtgttttctgaaagcacaaaaaggctgtgttc
cagagatagccaaggttgtactcctgctgcagcgggacttggtaatatgt
aagggtcaccaaggtggtactggtttttggaagtatgaaggggtcatgaa
gagtagctgaggctcgacattatgagaggtcatagatggccattggtgaa
gttgctgccatagttgcaattgaaggcccaggactgaaggggtcatgcag
tgttttggagatgccagtaccatgagatgaccaccaaaagcagcagcagc
agtacaggcatctggagtctagaggatgatgtgtgtgctacaaagggcct
ggctggagaagtgtcctaagcccttgggaggagcccagaagatcatgagt
ttggatcacagacattggaaggtggagattgatttttgcttttgatgtga
ctgtgcctgatatttcctctgaaggagaactatttattgagccccagtta
gagactttaattgtcaaagactttgatttaaaagagatggatatttaaag
attgaacatttaaataaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58138372_58139524
seq2: B6Ng01-097L20.b_47_1208 (reverse)

seq1  GTTTGACAGTAAGG--ACACAATA-CTTGTAATGTGTTGTCCTCCT-CCA  46
      ||||||||||||||  |||||||| ||||||||||||||||||||| |||
seq2  GTTTGACAGTAAGGACACACAATACCTTGTAATGTGTTGTCCTCCTCCCA  50

seq1  GTAT--CTGTGGACCCA-CGTCTCCTGCAGAAGGCCATTCGCATCCTGAC  93
      ||||  |||| |||||| ||||||||||||||||||| |||||||   | 
seq2  GTATTCCTGTAGACCCACCGTCTCCTGCAGAAGGCCA-TCGCATCTGAAT  99

seq1  TC-ATGAAGGTGTCTTTATTCTTAATCTTATCCGTTTTGAGTTGTGGTTA  142
      || ||||||||||| ||||||| |||| ||||||||||||||||||||||
seq2  TCAATGAAGGTGTCCTTATTCTAAATC-TATCCGTTTTGAGTTGTGGTTA  148

seq1  ATGGGCTCAGTTCTGGTTGGACTCAAGACAGCCTGCCCTCTCCTCTGTGC  192
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATGGGCTCAGTTCTGG-TGGACTCAAGACAGCCTGCCCTCTCCTCTGTGC  197

seq1  CT-AGTGAATTGAGGAAAAAGTGAACAGTGACCCTGTTCTGGCAGCT-AT  240
      || |||||| ||||||||||||||||| ||||||||||||||||||| ||
seq2  CTAAGTGAAATGAGGAAAAAGTGAACAATGACCCTGTTCTGGCAGCTAAT  247

seq1  AACCAGAGCAGAAACTTGCTATAACAT-AGCTCTTGG-AAATGGCCTAGG  288
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  AACCAGAGCAGAAACTTGCTATAACATAAGCTCTTGGAAAATGGCCTAGG  297

seq1  CTTTGGAACAGATGCAAGGAAGCTTTTTCAGGGCTGGGAATACACCTATA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAACAGATGCAAGGAAGCTTTTTCAGGGCTGGGAATACACCTATA  347

seq1  CCCTTCCGGATATGCTGAAGACAGTGAAGATTGTGTGTTCACTAGGGCCA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCGGATATGCTGAAGACAGTGAAGATTGTGTGTTCACTAGGGCCA  397

seq1  GGTAACCCTCTAACCTTTCTGCCCAAACTGACTTGAACTACTCAGCTGCT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCCTCTAACCTTTCTGCCCAAACTGACTTGAACTACTCAGCTGCT  447

seq1  GGAGGGTGAATTATGAAACAAGGTACTTTAGACTTTATATTTTTTTCTTG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTGAATTATGAAACAAGGTACTTTAGACTTTATATTTTTTTCTTG  497

seq1  TTTGCATACTTAGCTACATGCTTTCCTCCTTTAAGGATGGGAGGCAGCAC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATACTTAGCTACATGCTTTCCTCCTTTAAGGATGGGAGGCAGCAC  547

seq1  ATGGGGTGATTGTTTTAATATTTTCAGAAGTCCAATTATGAAAGAAGCAT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTGATTGTTTTAATATTTTCAGAAGTCCAATTATGAAAGAAGCAT  597

seq1  ATGGTTGGCCATCTCTGCTTCTGGGGGCTGATGGATGATCAAGAGCAGAG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGGCCATCTCTGCTTCTGGGGGCTGATGGATGATCAAGAGCAGAG  647

seq1  GTTATAGTCAGGCTCTGAGGTGTTATAGGTCATCCCAAAGGCCATATTTC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGTCAGGCTCTGAGGTGTTATAGGTCATCCCAAAGGCCATATTTC  697

seq1  GAAAGTAGGCTCTCTAGCTCATGGCTGTCCTTTGAAAATGGCCAGTTTAG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAGGCTCTCTAGCTCATGGCTGTCCTTTGAAAATGGCCAGTTTAG  747

seq1  ACATGGAAAATTTAGAAAAGGCTTTGTAAGAGAAAGTTATCTCACTGGTG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAAAATTTAGAAAAGGCTTTGTAAGAGAAAGTTATCTCACTGGTG  797

seq1  TACCTTTGAAGAGACTTTCTTTTTGCTTTTTGACTGCTGTGAAGTGAAAA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTGAAGAGACTTTCTTTTTGCTTTTTGACTGCTGTGAAGTGAAAA  847

seq1  ATGCATGTTATTATATCTTCTGCTCCAGGATGCCACACATTGTCGTTTTG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTTATTATATCTTCTGCTCCAGGATGCCACACATTGTCGTTTTG  897

seq1  GCTGTGCTTCTCCATCCATAGCAGTATGACTGGCCTGCAGTCACAGCCAG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCTTCTCCATCCATAGCAGTATGACTGGCCTGCAGTCACAGCCAG  947

seq1  GAGACTCTTAGTGGGGACGCAAGGCAGAATGACCATGGGATGGGGACCTC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCTTAGTGGGGACGCAAGGCAGAATGACCATGGGATGGGGACCTC  997

seq1  AGACTGATAGTGAGTACAGACAAGAACAGACTCTAGGAAGACAGGCTTCG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGATAGTGAGTACAGACAAGAACAGACTCTAGGAAGACAGGCTTCG  1047

seq1  GTGGAACAACAACTATTTAATTCTTTTGGAGGATGAGTACTGGCTGTTGT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACAACAACTATTTAATTCTTTTGGAGGATGAGTACTGGCTGTTGT  1097

seq1  GGTAAGTATACATCATCAGTTGGGGTCAGGGTGCTGAGATGCCTCATTTG  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTATACATCATCAGTTGGGGTCAGGGTGCTGAGATGCCTCATTTG  1147

seq1  CATAAGGAGGAATTC  1153
      |||||||||||||||
seq2  CATAAGGAGGAATTC  1162