BAC Information

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BAC

Clone NameB6Ng01-097P02
Chromosome8 (Build37)
Map Location 9,078,938 - 9,277,269
singlet/doubletdoublet
Overlap geneTmem28
Upstream geneLOC100039836, Efnb2, 9430010O03Rik
Downstream geneLig4, Abhd13, Tnfsf13b, Myo16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097P02.bB6Ng01-097P02.g
ACCDH908175DH908176
length703489
definitionDH908175|Mus musculus domesticus DNA, BAC clone: B6Ng01-097P02, 5' end.DH908176|Mus musculus domesticus DNA, BAC clone: B6Ng01-097P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,276,574 - 9,277,269)(9,078,938 - 9,079,432)
sequence
gaatttcctattaacatcatgagagagacactcttacccatattgactgt
gcagatgtcccttccttcccatgatgtccagcaacatgcctgctctgtca
tcatcgagcgcatgggtgatggaaatgaagaatgcattcatcatcaccat
tctcaatgtgactcggaactccagaagagtcgctgttgagaagcttaact
actggaataacaaagatatacttggcgtgcaaactaactttaaactacct
tgaacctactcaaagcttgccatgtggtgacagggccaccccagtttttt
ctatgatgtctctgttttcggtaaatgttacaatcctttaacgaatgaac
aagatgttcatccacttccaaatctatttcgtttgcctctgaacacctcc
caagtctgttttcctctgcacgcacacatttctcctgttccttttagttt
tcaaggcctcccctgctgattgcttcatcttcttaagtgttcctcccact
ctcagctccctggtttctcatctcatctccactctgcggccacagggata
atagaaacactcatctcaccatcttatcccccaccttaaaatatatttac
cattgtaggaaaaataacacagagacatattgctccatgggtgttgtctc
cgtgctctctgggagtcatctggataactctgtctggcttcattcttttg
tct

tccctatacttgttcttctcaaagtatcatgggtgatggagagcagagaa
ccagggtgttgctgagacaatcttctgttatgtgtgtggctatgaattat
atgtacagcacaaccagatcctctagtttcctcttttggtgaaaactttg
ctctgccataacgatattctccgcaaaatgtatctactttgctatatcat
agaagtaagaacacggaccaacacatgagtttatcttcaacgctggactt
tccagttggatttcatagtgatatttacaataacagatcatcttggtgaa
ttagatttcttggactgtgtgagcaagacttaaaagcagcttcattgtgg
gatttggggtcggaagcatctcctggcactgcagctcaggacatggcagg
ggattatgtctcttacctcagatgcacagggaaacctgtaacacaggtga
gtgatggcggtttaaatggtagttgccaccacatagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_9276574_9277269
seq2: B6Ng01-097P02.b_28_726 (reverse)

seq1  AGACAAAAGGATG-AGCCAGACAGGGTTCTCCAGGTGACTCCCAGAGAGC  49
      ||||||||| ||| |||||||||| ||| ||||| |||||||||||||||
seq2  AGACAAAAGAATGAAGCCAGACAGAGTTATCCAGATGACTCCCAGAGAGC  50

seq1  ACGGAGACAACACCCATGGAGCAATATGTCTCTGTGTT-CTTTTCCTCCA  98
      ||||||||||||||||||||||||||||||||||||||  ||||||| ||
seq2  ACGGAGACAACACCCATGGAGCAATATGTCTCTGTGTTATTTTTCCTACA  100

seq1  CTGGT-AATTTATTTTAAGGTGGGGGATAAGATGGTGAGATGAGTGTTTC  147
       |||| ||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAAATATATTTTAAGGTGGGGGATAAGATGGTGAGATGAGTGTTTC  150

seq1  TATTATCCCTGTGGCCGCAGAGTGGAGATGAGATGAGAAACCAGGGAGCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCCCTGTGGCCGCAGAGTGGAGATGAGATGAGAAACCAGGGAGCT  200

seq1  GAGAGTGGGAGGAACACTTTAGAAGATGAAGCAATCAGCAGGGGAGGCCT  247
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGAGTGGGAGGAACACTTAAGAAGATGAAGCAATCAGCAGGGGAGGCCT  250

seq1  TGAAAACTCGATGGAACAGGAGAAATGTGTGCGTGCAGAGGAAAACAGAC  297
      ||||||||  | ||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACTAAAAGGAACAGGAGAAATGTGTGCGTGCAGAGGAAAACAGAC  300

seq1  TTGGGAGGTGTTCAGAGGCAAACGAAATAGATTTGGAAGTGGATGAACAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGTGTTCAGAGGCAAACGAAATAGATTTGGAAGTGGATGAACAT  350

seq1  CTTGTTCATTCGTTAAAGGATTGTAACATTTACCGAAAACAGAGACATCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTGTTCATTCGTTAAAGGATTGTAACATTTACCGAAAACAGAGACATCA  400

seq1  TAGAAAAAACTGGGGTGGCCCTGTCACCACATGGCAAGCTTTGAGTAGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAAACTGGGGTGGCCCTGTCACCACATGGCAAGCTTTGAGTAGGT  450

seq1  TCAAGGTAGTTTAAAGTTAGTTTGCACGCCAAGTATATCTTTGTTATTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTAGTTTAAAGTTAGTTTGCACGCCAAGTATATCTTTGTTATTCC  500

seq1  AGTAGTTAAGCTTCTCAACAGCGACTCTTCTGGAGTTCCGAGTCACATTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTAAGCTTCTCAACAGCGACTCTTCTGGAGTTCCGAGTCACATTG  550

seq1  AGAATGGTGATGATGACTGCATTCTTCATTTCCATCACCCATGCGCTCGA  597
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGAATGGTGATGATGAATGCATTCTTCATTTCCATCACCCATGCGCTCGA  600

seq1  TGATGACAGAGCAGGCATGTTGCTGGTCATCATGGGAAGGAAGGGACATC  647
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGATGACAGAGCAGGCATGTTGCTGGACATCATGGGAAGGAAGGGACATC  650

seq1  TGCACAGTCAATATGGGTGGGAATCTCTCTCTCATGATGTTAATAGGAA  696
      ||||||||||||||||||  || | ||||||||||||||||||||||||
seq2  TGCACAGTCAATATGGGTAAGAGTGTCTCTCTCATGATGTTAATAGGAA  699


seq1: chr8_9078938_9079432
seq2: B6Ng01-097P02.g_68_562

seq1  GAATTCTCCCAAGACTTGTTCTTCTCAAAGTATCATGGGTGATGGAGAGC  50
      |||||||||| | |||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTATACTTGTTCTTCTCAAAGTATCATGGGTGATGGAGAGC  50

seq1  AGAGAACCAGGGTGTTGCTGAGACAATCTTCTGTTATGTGTGTGGCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCAGGGTGTTGCTGAGACAATCTTCTGTTATGTGTGTGGCTATG  100

seq1  AATTATATGTACAGCACAACCAGATCCTCTAGTTTCCTCTTTTGGTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATGTACAGCACAACCAGATCCTCTAGTTTCCTCTTTTGGTGAAA  150

seq1  ACTTTGCTCTGCCATAACGATATTCTCCGCAAAATGTATCTACTTTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCTCTGCCATAACGATATTCTCCGCAAAATGTATCTACTTTGCTA  200

seq1  TATCATAGAAGTAAGAACACGGACCAACACATGAGTTTATCTTCAACGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATAGAAGTAAGAACACGGACCAACACATGAGTTTATCTTCAACGCT  250

seq1  GGACTTTCCAGTTGGATTTCATAGTGATATTTACAATAACAGATCATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTCCAGTTGGATTTCATAGTGATATTTACAATAACAGATCATCTT  300

seq1  GGTGAATTAGATTTCTTGGACTGTGTGAGCAAGACTTAAAAGCAGCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATTAGATTTCTTGGACTGTGTGAGCAAGACTTAAAAGCAGCTTCA  350

seq1  TTGTGGGATTTGGGGTCGGAAGCATCTCCTGGCACTGCAGCTCAGGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGATTTGGGGTCGGAAGCATCTCCTGGCACTGCAGCTCAGGACAT  400

seq1  GGCAGGGGATTATGTCTCTTACCTCAGATGCACAGGGAAACCTGTAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGGATTATGTCTCTTACCTCAGATGCACAGGGAAACCTGTAACAC  450

seq1  AGGTGAGTGAGGGCGGTTTAAATGGAAGTTGCCACCACACAGTGA  495
      |||||||||| |||||||||||||| ||||||||||||| |||||
seq2  AGGTGAGTGATGGCGGTTTAAATGGTAGTTGCCACCACATAGTGA  495


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