BAC Information

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BAC

Clone NameB6Ng01-098G16
Chromosome8 (Build37)
Map Location 91,078,557 - 91,079,655
singlet/doubletsinglet
Overlap geneNkd1
Upstream gene4933402J07Rik, Zfp423, LOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369
Downstream gene9130017C17Rik, Nod2, Cyld, LOC675985, Sall1, LOC100041089, EG625801, EG384862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098G16.bB6Ng01-098G16.g
ACCDH908516DH908517
length1,113816
definitionDH908516|Mus musculus domesticus DNA, BAC clone: B6Ng01-098G16, 5' end.DH908517|Mus musculus domesticus DNA, BAC clone: B6Ng01-098G16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggccagctatccatgctgacagaccccagctgctgggtacc
actcctttctcctcccaccctcatagagttccttagaagacaccctggaa
aggccagctcaaccctgcccctgcccaatattcagtatcaacacttggac
ttcagtgactcttattggtccttaatgtcacaggtcaaaatctgaatgac
gaatggttttaccatctacccactgggactctctccaaagcctgagaagg
aatcccatgaagagaggtcatgtgtttcctgaggcatttgaggctcagta
ctggctatgcacattgccaatgagccctcaagatagtcagatgtgacaga
atgtgtttgaaagagaaggtattgatagcccttgctgtccagtcacagag
gactcagtagagccctaagatagttcaggttcttggctttccatgaaggc
caaagaaaagacaccaaatggccccaatagagaccaaatatccatgtgcc
tgtgacctacaatggcttctctgatggctggtcttttgaataattgtccc
catctgccacgcgctcatctggccagacactgctgcatgccttcttttac
ccttgccttcctttgaaacccttgcaacaccccagattctatgactacac
cagtttggttgttttgttttaaattgtatgtgtatgagtattttgccttg
catatatctgcaccccacatacactcctggtgctcacggaggccagaagc
ggggcaccgtatcccttggaaactgcaagtcacagatggttgttgagctt
ctatgtggggtgatgaaggatcaaaatcaggtccttttggaagagcaaca
tgtgctcttaaccacggagccatctctcaacctcgactcggtaagtttca
aagagagaaaagcttgagattccagataaatagtggctatggcccattca
gaacgttggttaaacaacactctacccaactccagagctgtggaccagta
aaggacttcttcccaagctggggatgaaccccagggtctaaggcttcatt
tttcttccattcttgactttccttattttttgcccctgtcccccacattg
gcatctttgatta
gaattccataaattcattgtttttaatagctgagtagtactccattgtat
aaatgttccacattttctgtatccattcctctgctgagggacatctgggt
tctttccagcttctggctattataaatagggctgctatgaacatagtgga
gcatgtgtccttactactagttggaacatcttctggatatatgcccagga
gaggtattgctggatctaccggtagtactatgttcagtttttctgaggaa
ccgccagactgatttccagagtggttgtaccagcttgcaatcccaccagc
aatggaggagtgttcctctttcttcacatcctcgccagcatctgctgtca
cctgaatttttgatcctagccattctgactgatgtgagatggaatctcag
ggttgttttgatttgcatttccctgatgattaaagatgctgaacattttt
tcaggtgcttctcggcccttcggtatttctcagttgagaattctttgttt
agctctgtaccccattttttaacagggttatttgaatttctggagttcag
ctccttgagctctttgtatatattggatattagtcctctatcagatttag
gattggtaaaaattctttcccaatctgttggtggcctttttgtcttattg
acagtgtcttttgccctacagaagctttgcaatctataggatggaacaca
gggcccccaatgtaggagctagagaaagtacccaagagctgaaggggtct
gcaccctataggtagaacaacaatatgaactaatcagtacccccagagct
cgtgtctctagctggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_91078557_91079655
seq2: B6Ng01-098G16.b_41_1153 (reverse)

seq1  TAATCAAAGATGCAGATGTGAGG--CTGTGGCAAAGA--AAGTGAAGTCA  46
      |||||||||||||  ||||| ||  | | |||||| |  |||  ||||||
seq2  TAATCAAAGATGCCAATGTGGGGGACAGGGGCAAAAAATAAGGAAAGTCA  50

seq1  AG-ATGTGAG-AAGATGAGGCCTCTGA-CCTGGGGGTCATCCCCAGCTTG  93
      || |||  || || |||| ||||  || ||||||| ||||||||||||| 
seq2  AGAATGGAAGAAAAATGAAGCCTTAGACCCTGGGGTTCATCCCCAGCTT-  99

seq1  GGGAAGAGGTCCTTTACTGCT-CACAGCTCTGGAGTTGGGTAGAGTGTTG  142
      ||||||| ||||||||||| | ||||||||||||||||||||||||||||
seq2  GGGAAGAAGTCCTTTACTGGTCCACAGCTCTGGAGTTGGGTAGAGTGTTG  149

seq1  TTTTAACAACGTTCTGAATGTGGCTTTGGCCACTATTTATCTGGAATCTC  192
      ||| | |||||||||||||| |||  | ||||||||||||||||||||||
seq2  TTTAACCAACGTTCTGAATG-GGCCATAGCCACTATTTATCTGGAATCTC  198

seq1  -AGCTTTCTTCTCTTTGAAACTTACAGAGTCGAGGTTGAGAGATGGCTCC  241
       ||||||  |||||||||||||||| ||||||||||||||||||||||||
seq2  AAGCTTTTCTCTCTTTGAAACTTACCGAGTCGAGGTTGAGAGATGGCTCC  248

seq1  GTGGTTAAGAGCACATGTTGCTCTTCC-AAAGGACCTGATTTTGATCC-T  289
      ||||||||||||||||||||||||||| |||||||||||||||||||| |
seq2  GTGGTTAAGAGCACATGTTGCTCTTCCAAAAGGACCTGATTTTGATCCTT  298

seq1  CATCA-CCCACATAGAAGCTC-ACAACCATCTGTGACTTGCAG-TTCCAA  336
      ||||| ||||||||||||||| ||||||||||||||||||||| ||||||
seq2  CATCACCCCACATAGAAGCTCAACAACCATCTGTGACTTGCAGTTTCCAA  348

seq1  GGGATACGGTG-CCCGCTTCTGGCCTCCGTGAGCACCAGGAGTGTATGTG  385
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGGATACGGTGCCCCGCTTCTGGCCTCCGTGAGCACCAGGAGTGTATGTG  398

seq1  GGGTGCAGATATATGCAAGGCAAAATACTCATACACATACAATTTAAAAC  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCAGATATATGCAAGGCAAAATACTCATACACATACAATTTAAAAC  448

seq1  AAAACAACCAAACTGGTGTAGTCATAGAATCTGGGGTGTTGCAAGGGTTT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACCAAACTGGTGTAGTCATAGAATCTGGGGTGTTGCAAGGGTTT  498

seq1  CAAAGGAAGGCAAGGGTAAAAGAAGGCATGCAGCAGTGTCTGGCCAGATG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAGGCAAGGGTAAAAGAAGGCATGCAGCAGTGTCTGGCCAGATG  548

seq1  AGCGCGTGGCAGATGGGGACAATTATTC-AAAGACCAGCCATCAGAGAAG  584
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGCGCGTGGCAGATGGGGACAATTATTCAAAAGACCAGCCATCAGAGAAG  598

seq1  CCATTGTAGGTCACAGGCACATGGATATTTGGTCTCTATTGGGGCCATTT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTAGGTCACAGGCACATGGATATTTGGTCTCTATTGGGGCCATTT  648

seq1  GGTGTCTTTTCTTTGGCCTTCATGGAAAGCCAAGAACCTGAACTATCTTA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTTTTCTTTGGCCTTCATGGAAAGCCAAGAACCTGAACTATCTTA  698

seq1  GGGCTCTACTGAGTCCTCTGTGACTGGACAGCAAGGGCTATCAATACCTT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTACTGAGTCCTCTGTGACTGGACAGCAAGGGCTATCAATACCTT  748

seq1  CTCTTTCAAACACATTCTGTCACATCTGACTATCTTGAGGGCTCATTGGC  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCAAACACATTCTGTCACATCTGACTATCTTGAGGGCTCATTGGC  798

seq1  AATGTGCATAGCCAGTACTGAGCCTCAAATGCCTCAGGAAACACATGACC  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCATAGCCAGTACTGAGCCTCAAATGCCTCAGGAAACACATGACC  848

seq1  TCTCTTCATGGGATTCCTTCTCAGGCTTTGGAGAGAGTCCCAGTGGGTAG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCATGGGATTCCTTCTCAGGCTTTGGAGAGAGTCCCAGTGGGTAG  898

seq1  ATGGTAAAACCATTCGTCATTCAGATTTTGACCTGTGACATTAAGGACCA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAAAACCATTCGTCATTCAGATTTTGACCTGTGACATTAAGGACCA  948

seq1  ATAAGAGTCACTGAAGTCCAAGTGTTGATACTGAATATTGGGCAGGGGCA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGTCACTGAAGTCCAAGTGTTGATACTGAATATTGGGCAGGGGCA  998

seq1  GGGTTGAGCTGGCCTTTCCAGGGTGTCTTCTAAGGAACTCTATGAGGGTG  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGAGCTGGCCTTTCCAGGGTGTCTTCTAAGGAACTCTATGAGGGTG  1048

seq1  GGAGGAGAAAGGAGTGGTACCCAGCAGCTGGGGTCTGTCAGCATGGATAG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGAAAGGAGTGGTACCCAGCAGCTGGGGTCTGTCAGCATGGATAG  1098

seq1  CTGGCCAAAGAATTC  1099
      |||||||||||||||
seq2  CTGGCCAAAGAATTC  1113