BAC Information

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BAC

Clone NameB6Ng01-099F17
Chromosome8 (Build37)
Map Location 84,159,127 - 84,160,300
singlet/doubletsinglet
Overlap genenone
Upstream geneFrem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Downstream geneInpp4b, LOC671182, Il15, EG666564
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099F17.bB6Ng01-099F17.g
ACCDH909172DH909173
length1,1611,013
definitionDH909172|Mus musculus domesticus DNA, BAC clone: B6Ng01-099F17, 5' end.DH909173|Mus musculus domesticus DNA, BAC clone: B6Ng01-099F17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctagaccaaattggcctgtaaccatgtgggtgggggattgtct
tgatttctaactggcaatggagagctcagccctctgtgggtgttataatt
ttttggacaggaggtcctgagctgtatgaggaagccagctgaggatgagc
ctccatgagtcaagaagcacctttcccctggagtttctgctgtactcact
tggatgcgctttagttacctagtccagagaaacactgcataaaatagaaa
gtaggcttgactttgatttcctgcctggacttccagcagtgatggactat
gacctgacaacataaatcaaatagaagcttttacctactaagttactttt
ggtcaaagtgccttatcccagctacagaaatgagatagaccctgttttaa
tgtgcaatttaaagttgtggtcattggcctttgcccaaaattgaaatgac
tctttagaagcatgagaatgttgctgctagttgagtttgattatgcttat
cagcaaaaagtggaaagataattgaactgcatttataacacacacacaca
tacacacacaagcacacagacaaacatacacacacacacacacacacaca
cacacggccttggacatccactttgagcatatccagactcccctcagcac
actatgtatttgttctgtgatgtgatttgttctgttccacttgtagtccc
cacattttatacagatttactgtagggttgtgctaaaatgcatgcactta
acaactgtgatcaacttttaacaagtagtgactactcacattggggtatg
tctcctgctctgtttcctcacacactgattttgtcttgtaaccagggacc
actgaacagttgcatagaggttgtgttataatgtaagtgacaacattgcc
atgttggctaatatttttaaagtttaaaagaagtgatcagtcaataacac
ttaaatatcaggacatggagttgtagtcatagatgtgcaggaaaatgcaa
gtagtaaatttgactaaagatggcgggttctgagtcaatactggtcctga
gggatggcaatggcagtgggagaaaataggttcttattcatgagaggggg
agagtgaaggtctaagggaggtcaggaactcacctggaacggagactgga
aactacataca

gaattctgttcatgtggctatcatcttttaggtttatcaaaagattattt
tcttgctttttcttgggagtagaaactccttgtgttgtagttttcccttt
attatcctttgaagggcttgagttgtggaaagatattgtgtaaagttggt
tttgtcatggtataccttggtttctccatctatggtaatttagaatttgg
ctgggtatagtaccctgggctggcatttatgttctcttagggtctgtatg
acatctgcccaggatcttctgtctttcatagtctctggtgagaagtctgg
tgtaattctgatacgtctgcctttatatgatacttgatctttttcccctt
tcgtttttaatattctttctttgtattgttcatttggtgttttgattact
atgtgacaggaggaatttcttttctactgcaaactacttggagttctgaa
ggcttcttgtatgttcatgagcatctttctttggctttgggaagttttct
tccataattttgttgaagatatttactggccctttaagttggaaatctcc
ctctagtctataccttttatccttagatttggtcttctcattgtgtcctg
gatttcttggatgttttgggttaggatctttttgtgtttcagattttctt
tgattgttgtgtcaattttttttttttttttggtatcttctgcacctgat
tttctctttctatctcttgtattctgttggagatgcttgcatctatggat
ccttacttctttcctaggttttctatattcagatttctctctctttgtga
tttctttagtgtttcttcttccattttgagatcctgatggttttgtacaa
ttacttcacctatttcattgtgtttcctgtattctttaaggatctgtgtg
tttctcttgaagtgcctctacctgtttactgtgtctcctgtattttttta
agaatttctgtatttcctcttaaggcttctactgtttagctgggttctct
atagttctctaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84159127_84160300
seq2: B6Ng01-099F17.b_47_1207 (reverse)

seq1  TGTATGTAGTTCTCCAGTCTCTGTACAAGGTGAGTATGCTGGACTTCCTT  50
      ||||||||||| ||||||||| || | |||||||| | || ||| ||| |
seq2  TGTATGTAGTT-TCCAGTCTCCGTTCCAGGTGAGT-TCCT-GACCTCCCT  47

seq1  TAAGGACCCTATCACTCCACTCTCTCATTGCAATAAGAACCTA-TTTCTC  99
      ||  |||| |  | |||| | |||||||   |||||||||||| ||||||
seq2  TA--GACCTTCACTCTCC-CCCTCTCAT--GAATAAGAACCTATTTTCTC  92

seq1  CCACTGCCCATTGCCATCACCTTCAGAACCAGTGATGACTCAGAACTCGC  149
      |||||| ||||||||||  || |||| ||||||  ||||||||||| |||
seq2  CCACTG-CCATTGCCAT--CCCTCAGGACCAGTATTGACTCAGAACCCGC  139

seq1  CAATTTTAGTCAAAATTTACTACTTGCATTTTCCTGCACAATCTATGGAC  199
      ||  ||||||| ||||||||||||||||||||||||||| |||||| |||
seq2  CATCTTTAGTC-AAATTTACTACTTGCATTTTCCTGCAC-ATCTAT-GAC  186

seq1  TAC-ACTCATTGTCCTGATATTTAAGTGTTATTGACTTGATCACTTCTTT  248
      ||| ||||  |||||||||||||||||||||||||| |||||||||||||
seq2  TACAACTCCATGTCCTGATATTTAAGTGTTATTGAC-TGATCACTTCTTT  235

seq1  TAAAACTTTAAAAATATTAGCCAACATGGCAATGTTGTCACTTACATTAT  298
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AAACTTTAAAAATATTAGCCAACATGGCAATGTTGTCACTTACATTAT  284

seq1  AACACAACCTCTATGCAACTGTTCAGTGGTCCCTGGTTACAAGACAAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACCTCTATGCAACTGTTCAGTGGTCCCTGGTTACAAGACAAAAT  334

seq1  CAGTGTGTGAGGAAACAGAGCAGGAGACATA-CCCAATGTGAGTAGTCAC  397
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGTGTGTGAGGAAACAGAGCAGGAGACATACCCCAATGTGAGTAGTCAC  384

seq1  TACTTGTTAAAAGTTGATCACAGTTGTTAAGTGCATGCATTTTAGCACAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTTAAAAGTTGATCACAGTTGTTAAGTGCATGCATTTTAGCACAA  434

seq1  CCCTACAGTAAATCTGTATAAAATGTGGGGACTACAAGTGGAACAGAACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACAGTAAATCTGTATAAAATGTGGGGACTACAAGTGGAACAGAACA  484

seq1  AATCACATCACAGAACAAATACATAGTGTGCTGAGGGGAGTCTGGATATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACATCACAGAACAAATACATAGTGTGCTGAGGGGAGTCTGGATATG  534

seq1  CTCAAAGTGGATGTCCAAGGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTGGATGTCCAAGGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGT  584

seq1  ATGTTTGTCTGTGTGCTTGTGTGTGTATGTGTGTGTGTGTTATAAATGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGTCTGTGTGCTTGTGTGTGTATGTGTGTGTGTGTTATAAATGCA  634

seq1  GTTCAATTATCTTTCCACTTTTTGCTGATAAGCATAATCAAACTCAACTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTATCTTTCCACTTTTTGCTGATAAGCATAATCAAACTCAACTA  684

seq1  GCAGCAACATTCTCATGCTTCTAAAGAGTCATTTCAATTTTGGGCAAAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAACATTCTCATGCTTCTAAAGAGTCATTTCAATTTTGGGCAAAGG  734

seq1  CCAATGACCACAACTTTAAATTGCACATTAAAACAGGGTCTATCTCATTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGACCACAACTTTAAATTGCACATTAAAACAGGGTCTATCTCATTT  784

seq1  CTGTAGCTGGGATAAGGCACTTTGACCAAAAGTAACTTAGTAGGTAAAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCTGGGATAAGGCACTTTGACCAAAAGTAACTTAGTAGGTAAAAG  834

seq1  CTTCTATTTGATTTATGTTGTCAGGTCATAGTCCATCACTGCTGGAAGTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTTGATTTATGTTGTCAGGTCATAGTCCATCACTGCTGGAAGTC  884

seq1  CAGGCAGGAAATCAAAGTCAAGCCTACTTTCTATTTTATGCAGTGTTTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGAAATCAAAGTCAAGCCTACTTTCTATTTTATGCAGTGTTTCT  934

seq1  CTGGACTAGGTAACTAAAGCGCATCCAAGTGAGTACAGCAGAAACTCCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTAGGTAACTAAAGCGCATCCAAGTGAGTACAGCAGAAACTCCAG  984

seq1  GGGAAAGGTGCTTCTTGACTCATGGAGGCTCATCCTCAGCTGGCTTCCTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGGTGCTTCTTGACTCATGGAGGCTCATCCTCAGCTGGCTTCCTC  1034

seq1  ATACAGCTCAGGACCTCCTGTCCAAAAAATTATAACACCCACAGAGGGCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCTCAGGACCTCCTGTCCAAAAAATTATAACACCCACAGAGGGCT  1084

seq1  GAGCTCTCCATTGCCAGTTAGAAATCAAGACAATCCCCCACCCACATGGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTCCATTGCCAGTTAGAAATCAAGACAATCCCCCACCCACATGGT  1134

seq1  TACAGGCCAATTTGGTCTAGGGAATTC  1174
      |||||||||||||||||||||||||||
seq2  TACAGGCCAATTTGGTCTAGGGAATTC  1161


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