BAC Information

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BAC

Clone NameB6Ng01-099G10
Chromosome8 (Build37)
Map Location 25,577,656 - 25,722,135
singlet/doubletdoublet
Overlap geneIndol1, Indo, Adam18
Upstream geneLOC100040931, Zmat4, 1810011O10Rik
Downstream geneAdam3, Adam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099G10.bB6Ng01-099G10.g
ACCDH909205DH909206
length1,106859
definitionDH909205|Mus musculus domesticus DNA, BAC clone: B6Ng01-099G10, 5' end.DH909206|Mus musculus domesticus DNA, BAC clone: B6Ng01-099G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,721,014 - 25,722,135)(25,577,656 - 25,578,512)
sequence
gaattcttaaatatttaaatgagagttactattaaattattcataaaata
atgatttgaatcaggttgatcagacctggttctttcagaatttgtgactg
tgagagaaccctccactgtcctttgtttttgcagtgtttgaattacacag
ctgttgttcttgtccacagatgctctgctgtggacatgggaacctgtccc
tcctttctagaagagcttagagccctgggatgtgggtatagtaggttggt
cagtgatatcttttgagttactggtgttaccagtgaaccacataagatga
acttcattccaagcaagtatacagcaccagaatatttaaataaatatgta
gaaagcatcaatggggaaaaaaactctatggaaaacatataatgtgagtt
tgaagtgttctcttattttccccaggatggttgcttgtggtttgtcaaag
tattagccacgttacacacacgtgagattaaagaggctcagaccaatccg
tcctttctggcgtttcctttccagagtcggcttttgctacaaagcgcctg
agtaagaatgaggacagctgggtgatcctgggcttcttcatctttctgcc
ttttcatcgtaactttcctttgttgggatcatgaagagaaacgaaaggaa
aatcgtgcctcagggagaacacaaaatatgaggggtaatattgcccgcct
ggtgttagctcactgggttaacggacttgcgccttcagtagctttgtaaa
ctcatacttacggcctcttaacatcctaccattctctttctctgcacttg
ggtgccctggatcttttcctgaaattacacgctgttccccatattcacgc
atgcttttctggcttgtgcttcttctctggacattttcactcacagacgg
taagaaactgattgtccaagtgaaacactttgctgctatttaactgtgga
gggaaggcctcattaagagaggccgataaagaaggattacggaattctca
ctgtacatctaggttcctaactgcttgagaagggacatgtacctgacaca
caagctgttacctgggtccactggctggtccttttggccaacgtcccaat
tagatg
gaattcttcccaatagtccataagaaaagaacctttctccctggctattg
agtttgaaaacaacaacaacaaaaaccaaaaacaaccaaaacaaacaaac
aaacaaacaaaaacttaaatctctgataaaatcacctggcctctgcccaa
ttcaaacacagatgctatttaggccacaggtcaggaactgatgagcagaa
ctcattacagagagtacagtctggcttgattccagggtagggtcatgagt
taaaacaggtcatgctattgaaaggatgggacaggcagggctgggttctc
gggaactcagggagtaaacacaacctctttcactcaccaacagtcaagca
ttaccagggcttcagaagtagatgatccgacgcacacagtattttaggga
aattaagcttaccagttgaacgatgtgcagaaaggacaaacttgagcaga
attgcaatggcgaagacccgtagtgggggaggagtgggcaaaaagatgca
tgtaggcagtggtttcaaagaaataggaaggctttggtggaaaacatgga
cctagacggagttagagacacaaaacatgagagtgatgcctttagccttc
aagactgaagatgaaggacaggcaaggcacactagagaaggctagtttgc
ctgcagatttgaacatgctgttttgtgatgaccgacatgcatacctttaa
gtaaacagcatgtagcatgactagggcggtagccatcaggtgtctaatca
tctggctaattcaacaaagagaccagattgagaaggaagagcagagaaga
tgagaaaagtcatctccgtggcttagcaggccaaggtgaggagggaggga
agggtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25721014_25722135
seq2: B6Ng01-099G10.b_44_1149 (reverse)

seq1  CATCTAATGTGGGCAGTTTGGCCAAAGGGCACAGCCAGTGGACACCAGGC  50
      |||||||| |||| |  ||||||||| ||  |||||||||||| ||||| 
seq2  CATCTAAT-TGGG-ACGTTGGCCAAAAGGACCAGCCAGTGGAC-CCAGG-  46

seq1  TAACAGCTTTGTGGTGTCAGGTTACAGTGTTCCTTACTCCAGCAGTTTAG  100
      ||||||| |||| |||||||| |||| ||| |||| ||| ||||| ||||
seq2  TAACAGC-TTGT-GTGTCAGG-TACA-TGTCCCTT-CTCAAGCAG-TTAG  90

seq1  GAACCCTGGAATGTACTTGTGAAGACTCCCTTATGCCTTCTTTATCTGGC  150
      |||||  |  ||||||  ||| ||| | || ||  ||||||||||| |||
seq2  GAACCTAG--ATGTAC-AGTG-AGAATTCCGTAATCCTTCTTTATC-GGC  135

seq1  CTCTTCTTTAACTGATGGCCTTCCCTCCACAGTTAAAATAGCAGCAAAAG  200
      ||| ||||  | ||| |||||||||||||||||| |||||||||| ||||
seq2  CTC-TCTT--AATGA-GGCCTTCCCTCCACAGTT-AAATAGCAGC-AAAG  179

seq1  TGTTTCACTTGGGCAATCAGTTTCTTACCGTCTGTGAGTG-AAATGTCCA  249
      |||||||||||| ||||||||||||||||||||||||||| |||||||||
seq2  TGTTTCACTTGGACAATCAGTTTCTTACCGTCTGTGAGTGAAAATGTCCA  229

seq1  GAG-AGAAGCACAAGCCAGAAAAGCATGCGTGAATATGGGGAACAGCGTG  298
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAGCACAAGCCAGAAAAGCATGCGTGAATATGGGGAACAGCGTG  279

seq1  TAATTTCAGGAAAAGATCCAGGGCACCCAAGTGCAGAG-AAGAGAATGGT  347
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAATTTCAGGAAAAGATCCAGGGCACCCAAGTGCAGAGAAAGAGAATGGT  329

seq1  AGGATGTTAAGAGGCCGTAAGTATGAGTTTACAAAGCTACTGAAGGCGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTTAAGAGGCCGTAAGTATGAGTTTACAAAGCTACTGAAGGCGCA  379

seq1  AGTCCGTTAACCCAGTGAGCTAACACCAGGCGGGCAATATTACCCCTCAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCGTTAACCCAGTGAGCTAACACCAGGCGGGCAATATTACCCCTCAT  429

seq1  ATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCATGAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCATGAT  479

seq1  CCCAAC-AAGGAAAGTTACGATG-AAAGGCAGAAAGATGAAGAAGCCCAG  545
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  CCCAACAAAGGAAAGTTACGATGAAAAGGCAGAAAGATGAAGAAGCCCAG  529

seq1  GATCACCCAGCTGTCCTCATTCTTACTCAGGCGCTTTGTAGCAAAAGCCG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACCCAGCTGTCCTCATTCTTACTCAGGCGCTTTGTAGCAAAAGCCG  579

seq1  ACTCTGGAAAGGAAACGCCAGAAAGGACGGATTGGTCTGAGCCTCTTTAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGAAAGGAAACGCCAGAAAGGACGGATTGGTCTGAGCCTCTTTAA  629

seq1  TCTCACGTGTGTGTAACGTGGCTAATACTTTGACAAACCACAAGCAACCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACGTGTGTGTAACGTGGCTAATACTTTGACAAACCACAAGCAACCA  679

seq1  TCCTGGGGAAAATAAGAGAACACTTCAAACTCACATTATATGTTTTCCAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGAAAATAAGAGAACACTTCAAACTCACATTATATGTTTTCCAT  729

seq1  AGAGTTTTTTTCCCCATTGATGCTTTCTACATATTTATTTAAATATTCTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTTTTCCCCATTGATGCTTTCTACATATTTATTTAAATATTCTG  779

seq1  GTGCTGTATACTTGCTTGGAATGAAGTTCATCTTATGTGGTTCACTGGTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTATACTTGCTTGGAATGAAGTTCATCTTATGTGGTTCACTGGTA  829

seq1  ACACCAGTAACTCAAAAGATATCACTGACCAACCTACTATACCCACATCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGTAACTCAAAAGATATCACTGACCAACCTACTATACCCACATCC  879

seq1  CAGGGCTCTAAGCTCTTCTAGAAAGGAGGGACAGGTTCCCATGTCCACAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTCTAAGCTCTTCTAGAAAGGAGGGACAGGTTCCCATGTCCACAG  929

seq1  CAGAGCATCTGTGGACAAGAACAACAGCTGTGTAATTCAAACACTGCAAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATCTGTGGACAAGAACAACAGCTGTGTAATTCAAACACTGCAAA  979

seq1  AACAAAGGACAGTGGAGGGTTCTCTCACAGTCACAAATTCTGAAAGAACC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGACAGTGGAGGGTTCTCTCACAGTCACAAATTCTGAAAGAACC  1029

seq1  AGGTCTGATCAACCTGATTCAAATCATTATTTTATGAATAATTTAATAGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGATCAACCTGATTCAAATCATTATTTTATGAATAATTTAATAGT  1079

seq1  AACTCTCATTTAAATATTTAAGAATTC  1122
      |||||||||||||||||||||||||||
seq2  AACTCTCATTTAAATATTTAAGAATTC  1106

seq1: chr8_25577656_25578512
seq2: B6Ng01-099G10.g_69_927

seq1  GAATTCTTCCCAATAGTCCATAAGAAAAGAACCTTTCTCCCTGGCTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCAATAGTCCATAAGAAAAGAACCTTTCTCCCTGGCTATTG  50

seq1  AGTTTGAAAACAACAACAACAAAAACCAAAAACAACCAAAACAAACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAAAACAACAACAACAAAAACCAAAAACAACCAAAACAAACAAAC  100

seq1  AAACAAACAAAAACTTAAATCTCTGATAAAATCACCTGGCCTCTGCCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAAAACTTAAATCTCTGATAAAATCACCTGGCCTCTGCCCAA  150

seq1  TTCAAACACAGATGCTATTTAGGCCACAGGTCAGGAACTGATGAGCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACACAGATGCTATTTAGGCCACAGGTCAGGAACTGATGAGCAGAA  200

seq1  CTCATTACAGAGAGTACAGTCTGGCTTGATTCCAGGGTAGGGTCATGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTACAGAGAGTACAGTCTGGCTTGATTCCAGGGTAGGGTCATGAGT  250

seq1  TAAAACAGGTCATGCTATTGAAAGGATGGGACAGGCAGGGCTGGGTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGGTCATGCTATTGAAAGGATGGGACAGGCAGGGCTGGGTTCTC  300

seq1  GGGAACTCAGGGAGTAAACACAACCTCTTTCACTCACCAACAGTCAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTCAGGGAGTAAACACAACCTCTTTCACTCACCAACAGTCAAGCA  350

seq1  TTACCAGGGCTTCAGAAGTAGATGATCCGACGCACACAGTATTTTAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGGGCTTCAGAAGTAGATGATCCGACGCACACAGTATTTTAGGGA  400

seq1  AATTAAGCTTACCAGTTGAACGATGTGCAGAAAGGACAAACTTGAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGCTTACCAGTTGAACGATGTGCAGAAAGGACAAACTTGAGCAGA  450

seq1  ATTGCAATGGCGAAGACCCGTAGTGGGGGAGGAGTGGGCAAAAAGATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAATGGCGAAGACCCGTAGTGGGGGAGGAGTGGGCAAAAAGATGCA  500

seq1  TGTAGGCAGTGGTTTCAAAGAAATAGGAAGGCTTTGGTGGAAAACATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCAGTGGTTTCAAAGAAATAGGAAGGCTTTGGTGGAAAACATGGA  550

seq1  CCTAGACGGAGTTAGAGACACAAAACATGAGAGTGATGCCTTTAGCCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACGGAGTTAGAGACACAAAACATGAGAGTGATGCCTTTAGCCTTC  600

seq1  AAGACTGAAGATGAAGGACAGGCAAGGCACACTAGAGAAGGCTAGTTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGAAGATGAAGGACAGGCAAGGCACACTAGAGAAGGCTAGTTTGC  650

seq1  CTGCAGATTTGAACATGCTG-TTTGTGATGACCGACATGCATACCTTTAA  699
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGCAGATTTGAACATGCTGTTTTGTGATGACCGACATGCATACCTTTAA  700

seq1  GTAAACAGCATGTAGCATGACTAGGGCGGTAGCCATCAGGTGTCTAATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAGCATGTAGCATGACTAGGGCGGTAGCCATCAGGTGTCTAATCA  750

seq1  TCTGGCTAATTCAACAAAGAGACCAGATTGAGAAGGAAGAGCAGAGAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTAATTCAACAAAGAGACCAGATTGAGAAGGAAGAGCAGAGAAGA  800

seq1  TGAGAAAAGTCATCTCCGTGGCTTAGCAGGCCAAGGTGAGGAGGGAGGG-  848
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGAGAAAAGTCATCTCCGTGGCTTAGCAGGCCAAGGTGAGGAGGGAGGGA  850

seq1  AGGGTGGGT  857
      |||||||||
seq2  AGGGTGGGT  859