BAC Information

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BAC

Clone NameB6Ng01-099N13
Chromosome8 (Build37)
Map Location 7,086,911 - 7,274,012
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665127, EG546032
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099N13.bB6Ng01-099N13.g
ACCDH909526DH909527
length1,088845
definitionDH909526|Mus musculus domesticus DNA, BAC clone: B6Ng01-099N13, 5' end.DH909527|Mus musculus domesticus DNA, BAC clone: B6Ng01-099N13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,272,902 - 7,274,012)(7,086,911 - 7,087,755)
sequence
gaattccttttccattgaggatggacaataagaggtttattcagccactc
aagaccatgttgtttgaaatggagaacggaagcattttctttcactttaa
ttagcaaagaggagaaagatgctctgctgttccctgacttctcatggcct
gaaaaggtacaaccctgaaactgaactccctcacttgcctacataggtct
aactcaacctcattttctgagtttggaaatctgaatttcaagatgcttcg
actctttatgaaccagttcccccaaaagaaactgtacaatattcttattc
cttgcagcacaccctccacatccttgcctttgcctactagttaagatttg
catacaaggaaaatgagcacatgatctctatcctgttaaacccagacttt
agattttatgctaggagctgtataccttttagggcaaacaagcactatgc
aatgtcatgcacacaaactaatgtaaagttaatttacatcagaaagaaag
ccttgcctatccttttccccctcccccaggacccagaaggtggaggtaaa
tcctcaataaaccaatgatttttttcttaggtatcccaattctttggagg
atgctacaaatgtaaatagattcattaaatgttccacaaagtcctggtgt
tagctgaggaactattggcaattgatacctgctgggaaagggagagtcag
cttttttttttttttttcaaggttgtgtcctctgatctgataggctgttc
atgttccagtgaatggtcacatatccatgcctatacttatatactgcacc
aaaatgtagagtcagtgtgaaacaaaacaaaacaaagcaaaaacattaaa
aacatcttgaagctgagaaagaaaatgtggtggcagcatatgggccaagc
aggaagttggtagatgggcttcataaagttttattatgtacattattata
catactcataatataattttacaaaatttccacattcttctcttccattt
tacccctctttcttcttccttcatctggtccttaaaagtttagttatttc
atttctttcccccccttccctcctctgctcctttggca

gaattcacatgtttgcctacatgtaaagtttacaagctttctggcacaca
tatatattgattgacagtgtttcagaatagttgcttcataagaatattca
ttttatactgttttattgatttgctatgtttacatgtctatcaattatcg
aaactggaatggttagattatatttccaatttataacaaatttatttcta
acatcagcttcctcaagtataactttaagtactttgggaccttgttgctt
actctagacagtattaaaaaaaaactgattatttaccaataagtgtagca
ttattgagaaagtttttttctctgataatagataaggattcagttatttt
gctctttctgttgatttttattcacacagaatcaccatattttgtatcta
gttctaaaataagtctcacatatacaaaaaatgaaacgttcaatatttta
attactcctgctggtgtaatttaaaaatcccaagaaaagtgctctaagaa
acaattcctccaatagttctctgttctcacccatccctgttggtaaatca
ccagagcagaacttgaagcctttggtcacattgcatctgtagtaaagaca
ctaagaggaaagaatgcttgtattcagatcaatttatccttagtataaag
gccatatttcaactcacagaacagtacaacccatgaggggcaggtattcc
aacctcagttaacctaaccaaggtatttccccacaggcatcacaaggagc
tggtctcctgaatgattctaagattttgataatccattctttcagcatct
gccttttcaccttaaacatgccttaggtgtgtttgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_7272902_7274012
seq2: B6Ng01-099N13.b_49_1136 (reverse)

seq1  TGCCAAGAGGGAGCAGGAAGGGGAAGGGGAAGGGGGGGAAAAGAAAATGA  50
      |||||  | |||||||  |||     |||||||||||||||   ||||||
seq2  TGCCA--AAGGAGCAG--AGG----AGGGAAGGGGGGGAAA--GAAATGA  40

seq1  AAATAAAACTAAAAACTATTAAAGAACCAGATGAAAGGAAAGAAGAAAGG  100
      |   | ||||  ||||| || ||| ||||||||||  | |||||||||| 
seq2  A---ATAACT--AAACT-TTTAAGGACCAGATGAA--GGAAGAAGAAAG-  81

seq1  AAGGGGGTAAAAATGGAAGAGAAGAATGTTGGAAATTTTGTTAAAATTAT  150
       |||||   ||||||||||||||||||| ||||||||||| |||||||||
seq2  -AGGGG--TAAAATGGAAGAGAAGAATG-TGGAAATTTTG-TAAAATTAT  126

seq1  ATTATTGAGTATTGTATAATAATGTACATAATAAAA-TTTATGAAGCCCA  199
      |||| |||||| |||||||||||||||||||||||| |||||||||||||
seq2  ATTA-TGAGTA-TGTATAATAATGTACATAATAAAACTTTATGAAGCCCA  174

seq1  TCTACCAACTTCCTGCTTGG-CCATATGCTGCCACCACATTTTC-TTCTC  247
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  TCTACCAACTTCCTGCTTGGCCCATATGCTGCCACCACATTTTCTTTCTC  224

seq1  AGCTTCAAGATGTTTTTAATGTTTTTGCTTTGTTTTGTTTTGTTTCACAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAAGATGTTTTTAATGTTTTTGCTTTGTTTTGTTTTGTTTCACAC  274

seq1  TGACTCTACATTTTGGTGCAGTATATAAGTATAGGCATGGATATGTGACC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTACATTTTGGTGCAGTATATAAGTATAGGCATGGATATGTGACC  324

seq1  ATTCACTGGAACATGAACAGCCTATCAGATCAGAGGACACAACCTTGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGGAACATGAACAGCCTATCAGATCAGAGGACACAACCTTGAAA  374

seq1  AAAAAAAAAAAAAGCTGACTCTCCCTTTCCCAGCAGGTATCAATTGCCAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGCTGACTCTCCCTTTCCCAGCAGGTATCAATTGCCAA  424

seq1  TAGTTCCTCAGCTAACACCAGGACTTTGTGGAACATTTAATGAATCTATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCTCAGCTAACACCAGGACTTTGTGGAACATTTAATGAATCTATT  474

seq1  TACATTTGTAGCATCCTCCAAAGAATTGGGATACCTAAGAAAAAAATCAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGTAGCATCCTCCAAAGAATTGGGATACCTAAGAAAAAAATCAT  524

seq1  TGGTTTATTGAGGATTTACCTCCACCTTCTGGGTCCTGGGGGAGGGGGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTATTGAGGATTTACCTCCACCTTCTGGGTCCTGGGGGAGGGGGAA  574

seq1  AAGGATAGGCAAGGCTTTCTTTCTGATGTAAATTAACTTTACATTAGTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAGGCAAGGCTTTCTTTCTGATGTAAATTAACTTTACATTAGTTT  624

seq1  GTGTGCATGACATTGCATAGTGCTTGTTTGCCCTAAAAGGTATACAGCTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATGACATTGCATAGTGCTTGTTTGCCCTAAAAGGTATACAGCTC  674

seq1  CTAGCATAAAATCTAAAGTCTGGGTTTAACAGGATAGAGATCATGTGCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATAAAATCTAAAGTCTGGGTTTAACAGGATAGAGATCATGTGCTC  724

seq1  ATTTTCCTTGTATGCAAATCTTAACTAGTAGGCAAAGGCAAGGATGTGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTTGTATGCAAATCTTAACTAGTAGGCAAAGGCAAGGATGTGGA  774

seq1  GGGTGTGCTGCAAGGAATAAGAATATTGTACAGTTTCTTTTGGGGGAACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGCTGCAAGGAATAAGAATATTGTACAGTTTCTTTTGGGGGAACT  824

seq1  GGTTCATAAAGAGTCGAAGCATCTTGAAATTCAGATTTCCAAACTCAGAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATAAAGAGTCGAAGCATCTTGAAATTCAGATTTCCAAACTCAGAA  874

seq1  AATGAGGTTGAGTTAGACCTATGTAGGCAAGTGAGGGAGTTCAGTTTCAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGTTGAGTTAGACCTATGTAGGCAAGTGAGGGAGTTCAGTTTCAG  924

seq1  GGTTGTACCTTTTCAGGCCATGAGAAGTCAGGGAACAGCAGAGCATCTTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACCTTTTCAGGCCATGAGAAGTCAGGGAACAGCAGAGCATCTTT  974

seq1  CTCCTCTTTGCTAATTAAAGTGAAAGAAAATGCTTCCGTTCTCCATTTCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTTGCTAATTAAAGTGAAAGAAAATGCTTCCGTTCTCCATTTCA  1024

seq1  AACAACATGGTCTTGAGTGGCTGAATAAACCTCTTATTGTCCATCCTCAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATGGTCTTGAGTGGCTGAATAAACCTCTTATTGTCCATCCTCAA  1074

seq1  TGGAAAAGGAATTC  1111
      ||||||||||||||
seq2  TGGAAAAGGAATTC  1088


seq1: chr8_7086911_7087755
seq2: B6Ng01-099N13.g_67_911

seq1  GAATTCACATGTTTGCCTACATGTAAAGTTTACAAGCTTTCTGGCACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGTTTGCCTACATGTAAAGTTTACAAGCTTTCTGGCACACA  50

seq1  TATATATTGATTGACAGTGTTTCAGAATAGTTGCTTCATAAGAATATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTGATTGACAGTGTTTCAGAATAGTTGCTTCATAAGAATATTCA  100

seq1  TTTTATACTGTTTTATTGATTTGCTATGTTTACATGTCTATCAATTATCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATACTGTTTTATTGATTTGCTATGTTTACATGTCTATCAATTATCG  150

seq1  AAACTGGAATGGTTAGATTATATTTCCAATTTATAACAAATTTATTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAATGGTTAGATTATATTTCCAATTTATAACAAATTTATTTCTA  200

seq1  ACATCAGCTTCCTCAAGTATAACTTTAAGTACTTTGGGACCTTGTTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGCTTCCTCAAGTATAACTTTAAGTACTTTGGGACCTTGTTGCTT  250

seq1  ACTCTAGACAGTATTAAAAAAAAACTGATTATTTACCAATAAGTGTAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGACAGTATTAAAAAAAAACTGATTATTTACCAATAAGTGTAGCA  300

seq1  TTATTGAGAAAGTTTTTTTCTCTGATAATAGATAAGGATTCAGTTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAGAAAGTTTTTTTCTCTGATAATAGATAAGGATTCAGTTATTTT  350

seq1  GCTCTTTCTGTTGATTTTTATTCACACAGAATCACCATATTTTGTATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTCTGTTGATTTTTATTCACACAGAATCACCATATTTTGTATCTA  400

seq1  GTTCTAAAATAAGTCTCACATATACAAAAAATGAAACGTTCAATATTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAAATAAGTCTCACATATACAAAAAATGAAACGTTCAATATTTTA  450

seq1  ATTACTCCTGCTGGTGTAATTTAAAAATCCCAAGAAAAGTGCTCTAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTCCTGCTGGTGTAATTTAAAAATCCCAAGAAAAGTGCTCTAAGAA  500

seq1  ACAATTCCTCCAATAGTTCTCTGTTCTCACCCATCCCTGTTGGTAAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCCTCCAATAGTTCTCTGTTCTCACCCATCCCTGTTGGTAAATCA  550

seq1  CCAGAGCAGAACTTGAAGCCTTTGGTCACATTGCATCTGTAGTAAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCAGAACTTGAAGCCTTTGGTCACATTGCATCTGTAGTAAAGACA  600

seq1  CTAAGAGGAAAGAATGCTTGTATTCAGATCAATTTATCCTTAGTATAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGGAAAGAATGCTTGTATTCAGATCAATTTATCCTTAGTATAAAG  650

seq1  GCCATATTTCAACTCACAGAACAGTACAACCCATGAGGGGCAGGTATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATTTCAACTCACAGAACAGTACAACCCATGAGGGGCAGGTATTCC  700

seq1  AACCTCAGTTAACCTAACCAAGGTATTTCCCCACAGGCATCACAAGGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAGTTAACCTAACCAAGGTATTTCCCCACAGGCATCACAAGGAGC  750

seq1  TGGTCTCCTGAATGATTCTAAGATTTTGATAATCCATTCTTTCAGCATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCCTGAATGATTCTAAGATTTTGATAATCCATTCTTTCAGCATCT  800

seq1  GCCTTTTCACCTTAAACATGCCTTAGGTGTGTTTGTGTGTGTGTG  845
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTCACCTTAAACATGCCTTAGGTGTGTTTGTGTGTGTGTG  845


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