BAC Information

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BAC

Clone NameB6Ng01-100J07
Chromosome8 (Build37)
Map Location 127,875,921 - 128,045,328
singlet/doubletdoublet
Overlap geneSipa1l2
Upstream genePgbd5, Cog2, Agt, Capn9, 2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67, 2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1, Tsnax, Disc1
Downstream gene4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100J07.bB6Ng01-100J07.g
ACCDH910034DH910035
length562982
definitionDH910034|Mus musculus domesticus DNA, BAC clone: B6Ng01-100J07, 5' end.DH910035|Mus musculus domesticus DNA, BAC clone: B6Ng01-100J07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,044,761 - 128,045,328)(127,875,921 - 127,876,904)
sequence
caggtgcactgcttcccgaggttcagaacagaacccgggctttatccgtg
ctaggcaagcactcttccagcagaactgcagcctgggccaagaaccaaga
aggaagtgcttccctgagcaccaggttcctcgtccagggaagcagggtgg
cctgtggactctgccactcccttctttccttccctttccttttaccgtag
gtaggtgtgagtttgtaaacagtatcggaactgtcaccagatgcagttgt
gatttaacagggtaatctgaaacacccttctccttctggtcttggtgttg
cctccacaacactgagaagtgactgtgatcataaaggctgctgggggatg
tggttgattcgtgttgctgtttcctgtggtagaattagaactcaggcgtt
ttaagagtatttattaaggctggagaaatgggtcagtgataagggtccag
gttctaaatgaatgagtgaaagagaaagagagagagagatatagagagag
agagagagaaaggaaggaaggaagaaagaatgaaaggaagaaatagaatg
agagagaatgaa
gaattcacaggctatatttgtttttattgtgtatgttttctggtaggatg
gagtctattgatctatgcccatgtgactaaagatggagggtgaagaggaa
gaatgtccgaactcacactgagagagagattgaaaggagcgaaacagaag
ccagaatcaacggaatgtcaggtcacacgcaggaacaagcactgcagagg
ccttagaaattagtctggtgaaacacttcccaaagcagagagaagaaaga
aattctagtccaggccaggacaagacccctggaaggaaaataatgagaac
agaaaaagcaaaggcgaacaaaataagaaaactccaaggctcagacgttg
gaactcaggagcccagcaggcaggaggctcagagacagcctgagaaagat
tcaaaagccacgtgcaggggccaaaggtgcagagaggaggaggcaaggag
cttccaaggccacagaaggtggtttctcataggacttgcaaatgagagca
agtgtggagtggtttaacttgtcactcacccttcttggctggctaaggca
ttgatgacctaagaggctcatttgtgaggcaagagtggatcagtccccca
tgcaggactgtgggaataagaaagttaacttgtggggctggaaagatggt
tcaggtgttaaagacaccactgttctttcaaaggactggggttcaattcc
cagcacttacatggcatcttacaaccatctgtaactccagatccagtcga
tcaaataccacttcttctggcttctgcaggcaccgtacacatgtggtgca
caagtggacaaaacgcccacacacaaaaagcaaaaagttttataagaaag
tttactccaagagccagaaaacaggaaaggccgtcatatgcactgccctg
tacaaattctctctgcaaatcaagaaaatcataacctgcagaaatcaaaa
aggagtctccccttccaagctccccccccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_128044761_128045328
seq2: B6Ng01-100J07.b_46_613 (reverse)

seq1  TTCTTTCTCTCTCTTTCTTTTTCTTCCTTTCTTTCTTTCTTCCTTCCTTC  50
      ||| ||||||||| |||| |||||||||||| ||||||||||||||||||
seq2  TTCATTCTCTCTCATTCTATTTCTTCCTTTCATTCTTTCTTCCTTCCTTC  50

seq1  CTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCACTCA  100
      |||||||||||||||||||| | |||||||||||||||||||||||||||
seq2  CTTTCTCTCTCTCTCTCTCTATATCTCTCTCTCTCTTTCTCTTTCACTCA  100

seq1  TTCATTTAGAACCTGGACCCTTATCACTGACCCATTTCTCCAGCCTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTAGAACCTGGACCCTTATCACTGACCCATTTCTCCAGCCTTAAT  150

seq1  AAATACTCTTAAAACGCCTGAGTTCTAATTCTACCACAGGAAACAGCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTCTTAAAACGCCTGAGTTCTAATTCTACCACAGGAAACAGCAAC  200

seq1  ACGAATCAACCACATCCCCCAGCAGCCTTTATGATCACAGTCACTTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATCAACCACATCCCCCAGCAGCCTTTATGATCACAGTCACTTCTCA  250

seq1  GTGTTGTGGAGGCAACACCAAGACCAGAAGGAGAAGGGTGTTTCAGATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTGGAGGCAACACCAAGACCAGAAGGAGAAGGGTGTTTCAGATTA  300

seq1  CCCTGTTAAATCACAACTGCATCTGGTGACAGTTCCGATACTGTTTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTAAATCACAACTGCATCTGGTGACAGTTCCGATACTGTTTACAA  350

seq1  ACTCACACCTACCTACGGTAAAAGGAAAGGGAAGGAAAGAAGGGAGTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACCTACCTACGGTAAAAGGAAAGGGAAGGAAAGAAGGGAGTGGC  400

seq1  AGAGTCCACAGGCCACCCTGCTTCCCTGGACGAGGAACCTGGTGCTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCACAGGCCACCCTGCTTCCCTGGACGAGGAACCTGGTGCTCAGG  450

seq1  GAAGCACTTCCTTCTTGGTTCTTGGCCCAGGCTGCAGTTCTGCTGGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACTTCCTTCTTGGTTCTTGGCCCAGGCTGCAGTTCTGCTGGAAGA  500

seq1  GTGCTTGCCTAGCACGGATAAAGCCCGGGTTCTGTTCTGAACCTCGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGCCTAGCACGGATAAAGCCCGGGTTCTGTTCTGAACCTCGGGAA  550

seq1  GCAGTGCACCTGGAATTC  568
      ||||||||||||||||||
seq2  GCAGTGCACCTGGAATTC  568

seq1: chr8_127875921_127876904
seq2: B6Ng01-100J07.g_71_1052

seq1  GAATTCACAGGCTATATTTGTTTTTATTGTGTATGTTTTCTGGTAGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGCTATATTTGTTTTTATTGTGTATGTTTTCTGGTAGGATG  50

seq1  GAGTCTATTGATCTATGCCCATGTGACTAAAGATGGAGGGTGAAGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTATTGATCTATGCCCATGTGACTAAAGATGGAGGGTGAAGAGGAA  100

seq1  GAATGTCCGAACTCACACTGAGAGAGAGATTGAAAGGAGCGAAACAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCCGAACTCACACTGAGAGAGAGATTGAAAGGAGCGAAACAGAAG  150

seq1  CCAGAATCAACGGAATGTCAGGTCACACGCAGGAACAAGCACTGCAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATCAACGGAATGTCAGGTCACACGCAGGAACAAGCACTGCAGAGG  200

seq1  CCTTAGAAATTAGTCTGGTGAAACACTTCCCAAAGCAGAGAGAAGAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAAATTAGTCTGGTGAAACACTTCCCAAAGCAGAGAGAAGAAAGA  250

seq1  AATTCTAGTCCAGGCCAGGACAAGACCCCTGGAAGGAAAATAATGAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAGTCCAGGCCAGGACAAGACCCCTGGAAGGAAAATAATGAGAAC  300

seq1  AGAAAAAGCAAAGGCGAACAAAATAAGAAAACTCCAAGGCTCAGACGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGCAAAGGCGAACAAAATAAGAAAACTCCAAGGCTCAGACGTTG  350

seq1  GAACTCAGGAGCCCAGCAGGCAGGAGGCTCAGAGACAGCCTGAGAAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGAGCCCAGCAGGCAGGAGGCTCAGAGACAGCCTGAGAAAGAT  400

seq1  TCAAAAGCCACGTGCAGGGGCCAAAGGTGCAGAGAGGAGGAGGCAAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGCCACGTGCAGGGGCCAAAGGTGCAGAGAGGAGGAGGCAAGGAG  450

seq1  CTTCCAAGGCCACAGAAGGTGGTTTCTCATAGGACTTGCAAATGAGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAGGCCACAGAAGGTGGTTTCTCATAGGACTTGCAAATGAGAGCA  500

seq1  AGTGTGGAGTGGTTTAACTTGTCACTCACCCTTCTTGGCTGGCTAAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGAGTGGTTTAACTTGTCACTCACCCTTCTTGGCTGGCTAAGGCA  550

seq1  TTGATGACCTAAGAGGCTCATTTGTGAGGCAAGAGTGGATCAGTCCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGACCTAAGAGGCTCATTTGTGAGGCAAGAGTGGATCAGTCCCCCA  600

seq1  TGCAGGACTGTGGGAATAAGAAAGTTAACTTGTGGGGCTGGAAAGATGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGACTGTGGGAATAAGAAAGTTAACTTGTGGGGCTGGAAAGATGGT  650

seq1  TCAGGTGTTAAAGACACCACTGTTCTTTCAAAGGACTGGGGTTCAATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGTTAAAGACACCACTGTTCTTTCAAAGGACTGGGGTTCAATTCC  700

seq1  CAGCACTTACATGGCATCTTACAACCATCTGTAACTCCAGATCCAGTCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTACATGGCATCTTACAACCATCTGTAACTCCAGATCCAGTCGA  750

seq1  TCAAATACCACTTCTTCTGGCTTCTGCAGGCACCGTACACATGTGGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATACCACTTCTTCTGGCTTCTGCAGGCACCGTACACATGTGGTGCA  800

seq1  CAAGTGGACAAAACGCCCACACACAAAAAGCAAAAAGTTTTATAAGAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGACAAAACGCCCACACACAAAAAGCAAAAAGTTTTATAAGAAAG  850

seq1  TTTACTCCAAGAGCCAGAAAACAAGAAAGGCCGTCATATGCACTGCCCTG  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTACTCCAAGAGCCAGAAAACAGGAAAGGCCGTCATATGCACTGCCCTG  900

seq1  TACAAATTCTCTCTGCAAATCAAGAAAATCAATAACCTGCAGAAATCAAA  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TACAAATTCTCTCTGCAAATCAAGAAAATC-ATAACCTGCAGAAATCAAA  949

seq1  AAGGAGTCTCCCCTTCCCAAGCTCCCCCCCCCCC  984
      ||||||||||||||| ||||||||||||||||||
seq2  AAGGAGTCTCCCCTT-CCAAGCTCCCCCCCCCCC  982