BAC Information

Click to search

BAC

Clone NameB6Ng01-100N08
Chromosome8 (Build37)
Map Location 44,533,232 - 44,534,224
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628212, Triml1, LOC622082, EG622117, LOC100039417, Zfp42
Downstream geneAdam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100N08.bB6Ng01-100N08.g
ACCDH910211DH910212
length9961,185
definitionDH910211|Mus musculus domesticus DNA, BAC clone: B6Ng01-100N08, 5' end.DH910212|Mus musculus domesticus DNA, BAC clone: B6Ng01-100N08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattccctggtgaaaaagcccaggaacacttgagtccactggcac
agctgataaaccatgccccgataagagtggcatggtaaactgaactccct
aattttttgtggggtgggggaagtagttctgagaaaccttgaatctgtct
caatatattattataaaaacctgaccgagcataaagccctcaaaggtgag
taaagaggggagtccacgtgctttgaagaaaatgcgggtgacttcatcaa
ctcgagggatctaatgaaatcactacacacccttaaatccgactgcattc
gcatgcgcaatcaatgcctacccaaacaattatatttggagtagtgtgct
tggcattagagattcagggatgaaaaagacaaggcatgacctatattcgt
agagctcgcagaccttgccatcattgtttaatgggcagtaagtacaactc
agatcagtaaatgattttccatgatatgatttctagtgatatagtcatca
cctctgaaacctacatgtaaagaaaatttttatgtttcagatacttgttc
tatggcttattaaagcttcaatggaaatggttttgtggccaaaatatttt
gaagggacaggtttatgaataaataggaaaatggttatttatttgcacat
acttacatgaactctgcacatatttgtgctcatttgcatgtacttgtgtg
accagtgttcgtcgtgctggaaagttgaatttgtaaactttatgtcaacc
atgcaacttttcttttctcaacatcttttctaccctctcattttgatgtt
ttctcacgtatccttatcagaggggttggaagatacatttaaaagctttc
tcttaccatcatactaaaaacatacaacatttagctcatacagatggttt
tgccatataatcctgctgcagccagtgtccaggaaaaggaacagacagta
attgtagcctattttgttgatgatgagcaattggagtgctacactc
gaattcttacctgaggaatacagaatggctgagaagcacctgaaaaaaat
attcagcatccttaatcatcagggaaatgcaaatgaaaacaacctgagat
tccacctcacaccagtcagaatggctaatatcaaaagttcaagtgacaac
agatgctgtcgagaatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttttacaaccattgtggaaatcagtctggtggttcctca
gaaaattggacatagtactaccagaggatcttgcaatacctctcctgggc
atatatccaggagatattccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatatggtacatttacacaatg
gagtactacttagctatttaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ataattcacatgatatgtactcactgataagaggatattagcccagcaac
ttagaatacccaagatataagatacaatttgcgaaacaaatgaaactcaa
aaagaacaaaaaccaaagtgtggacagtttgtcccttcttagatttggga
acaaaacacccatggaaggagttacggagacaaagtttggagctgagttg
aaaggatggaccatgtagagactgccatatctggggatacatcacataat
cagcctccaaaccctgacatcattgcatgcaatagcaagattttgctgaa
aagaccctgatatagttatctcttgtgagactatgttggggcctaccaaa
cacagaagtggatgctcacagtcagctactggatggatcacagggcccac
aatgtaggagctagagaaagtacccaaggagcttgggggatttgcaccct
attaggtggaacacatattgaactaccagcacatcccccacacacactgg
agcttctgtcctagctgcattgtatcaggagatggcctagtcggccacag
atagaagagagatctttgtgtgtgcttactttaattaaatgaatacgggg
aacgccagggcagaagattggatagtgtattagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44533232_44534224
seq2: B6Ng01-100N08.b_49_1044

seq1  GAATTCATTCCCTGGTGAAAAAGCCCAGGAACACTTGAGTCCACTGGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCCTGGTGAAAAAGCCCAGGAACACTTGAGTCCACTGGCAC  50

seq1  AGCTGATAAACCATGCCCCGATAAGAGTGGCATGGTAAACTGAACTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATAAACCATGCCCCGATAAGAGTGGCATGGTAAACTGAACTCCCT  100

seq1  AATTTTTTGTGGGGTGGGGGAAGTAGTTCTGAGAAACCTTGAATCTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTGTGGGGTGGGGGAAGTAGTTCTGAGAAACCTTGAATCTGTCT  150

seq1  CAATATATTATTATAAAAACCTGACCGAGCATAAAGCCCTCAAAGGTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATTATTATAAAAACCTGACCGAGCATAAAGCCCTCAAAGGTGAG  200

seq1  TAAAGAGGGGAGTCCACGTGCTTTGAAGAAAATGCGGGTGACTTCATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGGGGAGTCCACGTGCTTTGAAGAAAATGCGGGTGACTTCATCAA  250

seq1  CTCGAGGGATCTAATGAAATCACTACACACCCTTAAATCCGACTGCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGGGATCTAATGAAATCACTACACACCCTTAAATCCGACTGCATTC  300

seq1  GCATGCGCAATCAATGCCTACCCAAACAATTATATTTGGAGTAGTGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCGCAATCAATGCCTACCCAAACAATTATATTTGGAGTAGTGTGCT  350

seq1  TGGCATTAGAGATTCAGGGATGAAAAAGACAAGGCATGACCTATATTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTAGAGATTCAGGGATGAAAAAGACAAGGCATGACCTATATTCGT  400

seq1  AGAGCTCGCAGACCTTGCCATCATTGTTTAATGGGCAGTAAGTACAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCGCAGACCTTGCCATCATTGTTTAATGGGCAGTAAGTACAACTC  450

seq1  AGATCAGTAAATGATTTTCCATGATATGATTTCTAGTGATATAGTCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGTAAATGATTTTCCATGATATGATTTCTAGTGATATAGTCATCA  500

seq1  CCTCTGAAACCTACATGTAAAGAAAATTTTTATGTTTCAGATACTTGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAAACCTACATGTAAAGAAAATTTTTATGTTTCAGATACTTGTTC  550

seq1  TATGGCTTATTAAAGCTTCAATGGAAATGGTTTTGTGGCCAAAATATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTATTAAAGCTTCAATGGAAATGGTTTTGTGGCCAAAATATTTT  600

seq1  GAAGGGACAGGTTTATGAATAAATAGGAAAATGGTTATTTATTTGCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGACAGGTTTATGAATAAATAGGAAAATGGTTATTTATTTGCACAT  650

seq1  ACTTACATGAACTCTGCACATATTTGTGCTCATTTGCATGTACTTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACATGAACTCTGCACATATTTGTGCTCATTTGCATGTACTTGTGTG  700

seq1  ACCAGTGTTCGTCGTGCTGGAAAGTTGAATTTGTAAACTTTATGTCAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGTTCGTCGTGCTGGAAAGTTGAATTTGTAAACTTTATGTCAACC  750

seq1  ATGCAACTTTTCTTTTCTCAACATC-TTTCTACCCTCTCATTTTGATGTT  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGCAACTTTTCTTTTCTCAACATCTTTTCTACCCTCTCATTTTGATGTT  800

seq1  TTCTCACGTATCCTTATCAGA-GGGTTGGAAGATACATTTAAAAGCTTTC  848
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTCTCACGTATCCTTATCAGAGGGGTTGGAAGATACATTTAAAAGCTTTC  850

seq1  TCCTACCATCATACTAAAAACATACAACATTTAGCTCATACAGATGGTTT  898
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCATCATACTAAAAACATACAACATTTAGCTCATACAGATGGTTT  900

seq1  TGCCATATAATCCTGCTGCAGCCAGTGTCCAGGAAAAGGAACAGACAGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATATAATCCTGCTGCAGCCAGTGTCCAGGAAAAGGAACAGACAGTA  950

seq1  ATTGTAGCCTA-TGTGGTGATGATGAGCAATAGGAGTGCTACACTC  993
      ||||||||||| | || |||||||||||||| ||||||||||||||
seq2  ATTGTAGCCTATTTTGTTGATGATGAGCAATTGGAGTGCTACACTC  996