BAC Information

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BAC

Clone NameB6Ng01-100N17
Chromosome8 (Build37)
Map Location 90,394,479 - 90,499,039
singlet/doubletdoublet
Overlap geneZfp423
Upstream geneBC004022, LOC666960, EG625298, EG330819, Cbln1, LOC100040294, 4933402J07Rik
Downstream geneLOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100N17.bB6Ng01-100N17.g
ACCDH910227DH910228
length4631,006
definitionDH910227|Mus musculus domesticus DNA, BAC clone: B6Ng01-100N17, 5' end.DH910228|Mus musculus domesticus DNA, BAC clone: B6Ng01-100N17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,394,479 - 90,394,947)(90,498,033 - 90,499,039)
sequence
ctgcttctgccatcctctccgagggctccgaagagcactttccaaaagct
caggggcccaccaggccaactctgcctcgccagccaggaccaccctaaat
aagtcctacaccttgcttcctgcctgcccccatgttcccatgtaccaagt
atagtgggcacttgttaaatacacctcctgctattgatcaccgcagtttg
ttggaccagcctcgcttgccctttagcatccagcataagatctggtacac
agtaggtgctccaaaaaaaaagacttgtgagccaagtatggtggcacagc
actcaggaggcaggaaggtaggaggatctctgtgagttcaaagtcaccct
ggtctacatagacattcaagaccagccaaaggtacataatgaggccctgt
ctcaagaaagagaaggaaggaaggaaggaaggaaggaaggaaggaaggaa
ggagggagggagg
gaattccaggaccctgaggagtcactgtccagacttggcggcaggggatg
tcgatcgagccttgtgcactgaccacgtcctgtgctttcagaggagcccc
tggggacaggactccgggctcctcgcctgtgaacttcacttgcaggtcat
tcaacaaagatcccgtgcttgcccccagattcctggctgtgcgccccgtg
ttcttcccggttctcccccaccttgccagctgggcagcttagtaatgggg
gaagggctccctcccttctgaacccctgcggcggcttccttccccctccc
tgtggctctggaattcttggtggagcccactcctccggccctgtggagcg
aaccccctcccgtgcgctgggtgcggctgggtgtgcgggacatggagcac
ggagatcgcgggtcgagtggggcttgggccctgcacgctggtgtttctgc
atccaaccgtgtttatacaccggggcataattttttgtgcacacacgcag
cgacgcttggggaactttcctgaaaatcctgggctggcagtttaaatata
aaaaggctttgtttaatgccagaacgttttccccctgttctgggagtcgc
gaagcattcacctgcttcctcactcctttaaagactcgggaggccagact
tgttttaggggtgaagagttagggaggagacccctggatccaagcacaag
gttatctttccaagtccatgccacagccttctccatctctgtcgttcaag
gctatggaagccctctaaacctcgccagtcctgcctctctcctggggctg
tttaactttggatctttcctctgcaaatatctgggagtgttaaaccgatg
ccaacagcattgtggctgtggaattcaagtgaaatgtggccaaaaacgtt
gaaaggctgaggatcagaggtcggaggagctgaaggggaggtgttgttgg
caatgcatagtgaccatggaagcaaaccctcttctcggacttgaccactt
taaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_90394479_90394947
seq2: B6Ng01-100N17.b_49_517

seq1  GAATTCCTGCTTCTGCCATCCTCTCCGAGGGCTCCGAAGAGCACTTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTTCTGCCATCCTCTCCGAGGGCTCCGAAGAGCACTTTCCA  50

seq1  AAAGCTCAGGGGCCCACCAGGCCAACTCTGCCTCGCCAGCCAGGACCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCAGGGGCCCACCAGGCCAACTCTGCCTCGCCAGCCAGGACCACC  100

seq1  CTAAATAAGTCCTACACCTTGCTTCCTGCCTGCCCCCATGTTCCCATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAGTCCTACACCTTGCTTCCTGCCTGCCCCCATGTTCCCATGTA  150

seq1  CCAAGTATAGTGGGCACTTGTTAAATACACCTCCTGCTATTGATCACCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTATAGTGGGCACTTGTTAAATACACCTCCTGCTATTGATCACCGC  200

seq1  AGTTTGTTGGACCAGCCTCGCTTGCCCTTTAGCATCCAGCATAAGATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTGGACCAGCCTCGCTTGCCCTTTAGCATCCAGCATAAGATCTG  250

seq1  GTACACAGTAGGTGCTCCAAAAAAAAAGACTTGTGAGCCAAGTATGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAGTAGGTGCTCCAAAAAAAAAGACTTGTGAGCCAAGTATGGTGG  300

seq1  CACAGCACTCAGGAGGCAGGAAGGTAGGAGGATCTCTGTGAGTTCAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCACTCAGGAGGCAGGAAGGTAGGAGGATCTCTGTGAGTTCAAAGT  350

seq1  CACCCTGGTCTACATAGACATTCAAGACCAGCCAAAGGTACATAATGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGGTCTACATAGACATTCAAGACCAGCCAAAGGTACATAATGAGG  400

seq1  CCCTGTCTCAAGAAAGAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAAGAAAGAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  450

seq1  AAGGAAGGAGGGAGGGAGG  469
      |||||||||||||||||||
seq2  AAGGAAGGAGGGAGGGAGG  469

seq1: chr8_90498033_90499039
seq2: B6Ng01-100N17.g_69_1074 (reverse)

seq1  TCTTTAAAGTGGTCAAGTCCGAG-AGAGGGTCTGCCCTCCATGGTCACCT  49
      ||||||||||||||||||||||| ||||||| || | |||||||||||  
seq2  TCTTTAAAGTGGTCAAGTCCGAGAAGAGGGTTTG-CTTCCATGGTCACTA  49

seq1  TGCCTTGCCCACAACACCCTCCCCTTCAGCTTCCTCCAGCCCTCTGTTCC  99
      ||| ||||| |||||| ||||||||||||| |||||| | |||||| |||
seq2  TGCATTGCCAACAACA-CCTCCCCTTCAGC-TCCTCC-GACCTCTGATCC  96

seq1  TCAGCC-TTCCACGTTTTTGGCCACATTTCAACTTGAATTCCACAGCCAC  148
      |||||| ||| ||||||||||||||||||| |||||||||||||||||||
seq2  TCAGCCTTTCAACGTTTTTGGCCACATTTC-ACTTGAATTCCACAGCCAC  145

seq1  AATGCTGTTGGCATCGGTTTAACACTCCCAGATATTTGCAGAGGAAAGAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTTGGCATCGGTTTAACACTCCCAGATATTTGCAGAGGAAAGAT  195

seq1  CCAAAGTTAAACAGCCCCAGGAGAGAGGCAGGACTGGCGAGGTTTAG-GG  247
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCAAAGTTAAACAGCCCCAGGAGAGAGGCAGGACTGGCGAGGTTTAGAGG  245

seq1  GCTTCCATAGCCTTGAACGACAGAGATGGAGAAGGCTGTGGCATGGACTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCATAGCCTTGAACGACAGAGATGGAGAAGGCTGTGGCATGGACTT  295

seq1  GG-AAGATAACCTTGTGCTTGGATCCAGGGGTCTCCTCCCTAACTCTTCA  346
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGATAACCTTGTGCTTGGATCCAGGGGTCTCCTCCCTAACTCTTCA  345

seq1  CCCCTAAAACAAGTCTGGCCTCCCGAGTCTTTAAAGGAGTGAGGAAGCAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAAAACAAGTCTGGCCTCCCGAGTCTTTAAAGGAGTGAGGAAGCAG  395

seq1  GTGAATGCTTCGCGACTCCCAGAACAGGGGGAAAACGTTCTGGCATTAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGCTTCGCGACTCCCAGAACAGGGGGAAAACGTTCTGGCATTAAA  445

seq1  CAAAGCCTTTTTATATTTAAACTGCCAGCCCAGGATTTTCAGGAAAGTTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCTTTTTATATTTAAACTGCCAGCCCAGGATTTTCAGGAAAGTTC  495

seq1  CCCAAGCGTCGCTGCGTGTGTGCACAAAAAATTATGCCCCGGTGTATAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCGTCGCTGCGTGTGTGCACAAAAAATTATGCCCCGGTGTATAAA  545

seq1  CACGGTTGGATGCAGAAACACCAGCGTGCAGGGCCCAAGCCCCACTCGAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTTGGATGCAGAAACACCAGCGTGCAGGGCCCAAGCCCCACTCGAC  595

seq1  CCGCGATCTCCGTGCTCCATGTCCCGCACACCCAGCCGCACCCAGCGCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCGATCTCCGTGCTCCATGTCCCGCACACCCAGCCGCACCCAGCGCAC  645

seq1  GGGAGGGGGTTCGCTCCACAGGGCCGGAGGAGTGGGCTCCACCAAGAATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGGTTCGCTCCACAGGGCCGGAGGAGTGGGCTCCACCAAGAATT  695

seq1  CCAGAGCCACAGGGAGGGGGAAGGAAGCCGCCGCAGGGGTTCAGAAGGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCCACAGGGAGGGGGAAGGAAGCCGCCGCAGGGGTTCAGAAGGGA  745

seq1  GGGAGCCCTTCCCCCATTACTAAGCTGCCCAGCTGGCAAGGTGGGGGAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCCTTCCCCCATTACTAAGCTGCCCAGCTGGCAAGGTGGGGGAGA  795

seq1  ACCGGGAAGAACACGGGGCGCACAGCCAGGAATCTGGGGGCAAGCACGGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGGAAGAACACGGGGCGCACAGCCAGGAATCTGGGGGCAAGCACGGG  845

seq1  ATCTTTGTTGAATGACCTGCAAGTGAAGTTCACAGGCGAGGAGCCCGGAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGTTGAATGACCTGCAAGTGAAGTTCACAGGCGAGGAGCCCGGAG  895

seq1  TCCTGTCCCCAGGGGCTCCTCTGAAAGCACAGGACGTGGTCAGTGCACAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCCCCAGGGGCTCCTCTGAAAGCACAGGACGTGGTCAGTGCACAA  945

seq1  GGCTCGATCGACATCCCCTGCCGCCAAGTCTGGACAGTGACTCCTCAGGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGATCGACATCCCCTGCCGCCAAGTCTGGACAGTGACTCCTCAGGG  995

seq1  TCCTGGAATTC  1007
      |||||||||||
seq2  TCCTGGAATTC  1006