BAC Information

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BAC

Clone NameB6Ng01-100P15
Chromosome8 (Build37)
Map Location 6,824,318 - 6,825,495
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100P15.bB6Ng01-100P15.g
ACCDH910309DH910310
length1,165746
definitionDH910309|Mus musculus domesticus DNA, BAC clone: B6Ng01-100P15, 5' end.DH910310|Mus musculus domesticus DNA, BAC clone: B6Ng01-100P15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatagcagagaaacagctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
atatgctggtgaggatgtggagaaaggggaacgctcctccattgttggtg
ggattgcaggcttttacaaacactctggaaatcagtctggcagttcctca
gaaaattggacatagtactattggaggatcctgaaatacctctcctgggc
atatatccagaagatatcccaaccggtaagaaggacacatgctctactat
gttcatagcagtcttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatacaactcagctatttaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctcagtgaagtaacccaatcacaaag
gaactcgcacaatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaaattgccaaacgcatgaaattcaag
aagaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaa
caaaacacccatggaaggagttacaaagacaaaatttggagatgtgacta
aaggatggaccctctagtgattgccatatgcagggatccatcacataatc
agcttccaaatgctgacaccatggcatacactagtaagattttggtgaaa
ggacccagatatagctctctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgatcacagtcagctattggatgggtcacacggccctc
aatggaggagctagagaattactcatgagctaaagggatcttgcaaccct
atagtgacacatatgactaccagtactccggagctctgactcttagctgc
tatgtaacaaagatggcctagtagcatcactgcaagagaggccattgact
tgctaactttaattgctcagtcaggaacgtcaggcaaatgggatggagtt
ctggaattgggtggg

gaattctcagctcctccagtcccatgtttgccctcctccttccttgatga
taatgaactgaacctctaagaacctatatgccatcccctattcaatgtca
tccttataagagttgccttggtcatggtgtctgttcacagcagtaaaacc
ctcaataagacatgaacctagtactttctgtgcactaggactaagatggt
taatcactgccatctgttaaagtcttgtcatggttttgttcctctccatt
tctgttttcttttgggatatctatgcaggtaagaaaaggataattattaa
attaacatttggacaataatgtactctagtacctagtaccactacccacg
taacaggaagtttctctgagcaagactgtaaacagcacctatctatgttt
ataaacacacatttttaggagttacattgacaatatgcatatggtctgca
atgtacctattctttgatactgattatgtttacagtgccaggcatacact
tttgggacaggcttaacacagtcaaaattgcagttggttacatccattaa
tcttgacactactgcattagtgggcacatctaacgtggcactttggtact
gtagcatgcagagtccagtgtgaggtatcattttccccccagaaccatgc
aagtcatttgtatcaagtctataatcctagttctgctgaagctgaggcaa
gaagattgctgtcagttagagtctattttgacttcagagtgaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6824318_6825495
seq2: B6Ng01-100P15.g_68_1252 (reverse)

seq1  CTCTGACTCTGAAGATATTTCTCC--ATCACTTCCTTAGAAAGA-TCATA  47
      |||||| || |||||| |||||||  ||||||| | |||||||| |||||
seq2  CTCTGAGTC-GAAGAT-TTTCTCCCTATCACTTTCCTAGAAAGATTCATA  48

seq1  G-GTGTGTGAGA-GGTGAATTCTTCCTGTCAGCA-CAGA-GTTTGGAA--  91
      | |||   |||| ||||||||||||||||||||| |||| ||||||||  
seq2  GAGTGGTGGAGAGGGTGAATTCTTCCTGTCAGCACCAGAGGTTTGGAAAT  98

seq1  TTTCTAATGCTTTCAGGGAATTAAAGCCACGCCTTCCTATTTTATCTAAG  141
       ||||||||||||||| ||| |||||| ||||||| ||  ||| ||||||
seq2  CTTCTAATGCTTTCAGAGAA-TAAAGCAACGCCTTTCTTATTTTTCTAAG  147

seq1  ATGAAGTTAAGCATCAGACCCTAGGGAAGGGACCTGCCTAATCGTAGAAA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTAAGCATCAGACCCTAGGGAAGGGACCTGCCTAATCGTAGAAA  197

seq1  TCGTCAAGGAAGCAAGTCCACTCCAGAGGCTAGACAATAATTAGCACTGC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCAAGGAAGCAAGTCCACTCCAGAGGCTAGACAATAATTAGCACTGC  247

seq1  ACCTGTCTGTAGCAGCACTGTGTTCCTCCAAGTGGCACCAGAGATGTCAG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCTGTAGCAGCACTGTGTTCCTCCAAGTGGCACCAGAGATGTCAG  297

seq1  ACTAAAAATAGATCACAGTTTATAGCTGACATAGCATATCTTATTTAAGA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAATAGATCACAGTTTATAGCTGACATAGCATATCTTATTTAAGA  347

seq1  TCCAAAGTGAATTAGATAATGCAGTTCATTG-AAAGTGTGAATCTGGCCT  390
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCAAAGTGAATTAGATAATGCAGTTCATTGAAAAGTGTGAATCTGGCCT  397

seq1  CTCCTAACCTTTTTATGTGTTTGCTAATTTGAGGGCAGTTTGGATTTCAC  440
      |||||||||||||||||||||||||                 ||||||||
seq2  CTCCTAACCTTTTTATGTGTTTGCTNNNNNNNNNNNNNNNNNGATTTCAC  447

seq1  TCTGAAGTCAAAATAGACTCTAACTGACAGCAATCTTCTTGCCTCAGCTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTCAAAATAGACTCTAACTGACAGCAATCTTCTTGCCTCAGCTT  497

seq1  CAGCAGAACTAGGATTATAGACTTGATACAAATGACTTGCATGGTTCTGG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAACTAGGATTATAGACTTGATACAAATGACTTGCATGGTTCTGG  547

seq1  GGGGAAAATGATACCTCACACTGGACTCTGCATGCTACAGTACCAAAGTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAATGATACCTCACACTGGACTCTGCATGCTACAGTACCAAAGTG  597

seq1  CCACGTTAGATGTGCCCACTAATGCAGTAGTGTCAAGATTAATGGATGTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTTAGATGTGCCCACTAATGCAGTAGTGTCAAGATTAATGGATGTA  647

seq1  ACCAACTGCAATTTTGACTGTGTTAAGCCTGTCCCAAAAGTGTATGCCTG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTGCAATTTTGACTGTGTTAAGCCTGTCCCAAAAGTGTATGCCTG  697

seq1  GCACTGTAAACATAATCAGTATCAAAGAATAGGTACATTGCAGACCATAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTAAACATAATCAGTATCAAAGAATAGGTACATTGCAGACCATAT  747

seq1  GCATATTGTCAATGTAACTCCTAAAAATGTGTGTTTATAAACATAGATAG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTGTCAATGTAACTCCTAAAAATGTGTGTTTATAAACATAGATAG  797

seq1  GTGCTGTTTACAGTCTTGCTCAGAGAAACTTCCTGTTACGTGGGTAGTGG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTTTACAGTCTTGCTCAGAGAAACTTCCTGTTACGTGGGTAGTGG  847

seq1  TACTAGGTACTAGAGTACATTATTGTCCAAATGTTAATTTAATAATTATC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGTACTAGAGTACATTATTGTCCAAATGTTAATTTAATAATTATC  897

seq1  CTTTTCTTACCTGCATAGATATCCCAAAAGAAAACAGAAATGGAGAGGAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTACCTGCATAGATATCCCAAAAGAAAACAGAAATGGAGAGGAA  947

seq1  CAAAACCATGACAAGACTTTAACAGATGGCAGTGATTAACCATCTTAGTC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATGACAAGACTTTAACAGATGGCAGTGATTAACCATCTTAGTC  997

seq1  CTAGTGCACAGAAAGTACTAGGTTCATGTCTTATTGAGGGTTTTACTGCT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGCACAGAAAGTACTAGGTTCATGTCTTATTGAGGGTTTTACTGCT  1047

seq1  GTGAACAGACACCATGACCAAGGCAACTCTTATAAGGATGACATTGAATA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAGACACCATGACCAAGGCAACTCTTATAAGGATGACATTGAATA  1097

seq1  GGGGATGGCATATAGGTTCTTAGAGGTTCAGTTCATTATCATCAAGGAAG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGGCATATAGGTTCTTAGAGGTTCAGTTCATTATCATCAAGGAAG  1147

seq1  GAGGAGGGCAAACATGGGACTGGAGGAGCTGAGAATTC  1178
      ||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGGCAAACATGGGACTGGAGGAGCTGAGAATTC  1185


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