BAC Information

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BAC

Clone NameB6Ng01-102A16
Chromosome8 (Build37)
Map Location 100,708,444 - 100,709,557
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546090, LOC636859, EG384885, LOC100041173
Downstream geneEG636915, Cdh8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102A16.bB6Ng01-102A16.g
ACCDH911047DH911048
length6381,105
definitionDH911047|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A16, 5' end.DH911048|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattgtgtcttctttcttaagtgtgatagaagcttctctggaat
ttcagagcttgctcatttagaagatagaatgatgactatggaaacgagtc
ggggggtggtatgcaattcttatgaaacaagagcagatttatcaaatgtc
tgcatggaggtgtagcatcataacaaggaaccgaatctatgtgtttgtat
atccagtgaagtaaagtccactagaaaagagtagtatttcagggatccat
cccataatcagcctccaaacactgacaccattgtgtacactagcaagatt
ttgctgaaaggaccctgatatagctgtctctagtgagactatgccggggc
ctagcaaacacagaagtggatgctcacagtcagctattggatggatcaca
gggcccccaatggaggaggtagagaaagtacccaaggagctaaaggggtc
tgcaaccctataggtggaacaacactatgaactaaccagtaccccagagc
tcttgactctagctgcatatatatcaaaagatggcgtagtcatcactaga
aagagaggcccattggatttgcaaactttatatgccccagtataggggaa
tgccagggccaaaaagtgggagtgggggggggagggta

gaattcattatcaaaaatgagttcattcatttatgaattataaaaattat
agctaaataataatgtttctttataaagcatagagttactgtcttagtta
ggacttctattggtgtgaaaaaaaaaacatcttggacaaaaatgacatgt
tggaggggtatgttttctgacagttggttgttgatcatctagggaagtca
gagcaggaactcaagacaggaacctggaggaaaaaagtgaagcagaggcc
atccatggccaatacttcttagtagcttcctttctattggtgcatctttt
tgtataacattcaggaccacctgcctgtggaccaccactcacagtgggct
tagaccctcaatcagttattactcaggaaacacacaagccagttggatgt
gtgtgaagtttaagttgtgacgctctccacttagattacttaagctcata
taaaattaacaaaacaaagaacaaaaactaaccagggtagagcatctgtc
tcatttctataatctacccacaacctggcacctgtttctcacaatgataa
cctcataaagatcagacgctagatatgcattcttgggtataaaaatgact
gtcatatgtaataggacaaaagagcatgccagtctttaattatttatact
ccttgtcccattttccaattcaatttcctctttaggatgaaagaacaaga
gtgcattcatgaaactaaggcatgaagtttgataagagttctaaaatatc
ttgtattacttatcttccagtttatcctagcgaaaacaaaatcgattttt
atgtaagaatacatgatcagttagatacccagtgttattgtatgatcttt
cttcttgttctaggtatcagaccagaaactcatttacataaacacatgcc
ttattttcttttaaaaatacttgtggtccattcctgtctcttctagattg
cataccatgcaatgaacttctgtgtataataaaagtttaagaaagcatag
aactgtgctttgaaatttcagagtctttttctaacagcataacataagtt
ttctgacaagatgaacatcatcagtttaacatggaatatggaatagccgt
ctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_100708444_100709557
seq2: B6Ng01-102A16.g_68_1172

seq1  GAATTCATTATCAAAAATGAGTTCATTCATTTATGAATTATAAAAATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATCAAAAATGAGTTCATTCATTTATGAATTATAAAAATTAT  50

seq1  AGCTAAATAATAATGTTTCTTTATAAAGCATAGAGTTACTGTCTTAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAATAATAATGTTTCTTTATAAAGCATAGAGTTACTGTCTTAGTTA  100

seq1  GGACTTCTATTGGTGTGAAAAAAAAAACATCTTGGACAAAAATGACATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCTATTGGTGTGAAAAAAAAAACATCTTGGACAAAAATGACATGT  150

seq1  TGGAGGGGTATGTTTTCTGACAGTTGGTTGTTGATCATCTAGGGAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGGTATGTTTTCTGACAGTTGGTTGTTGATCATCTAGGGAAGTCA  200

seq1  GAGCAGGAACTCAAGACAGGAACCTGGAGGAAAAAAGTGAAGCAGAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGAACTCAAGACAGGAACCTGGAGGAAAAAAGTGAAGCAGAGGCC  250

seq1  ATCCATGGCCAATACTTCTTAGTAGCTTCCTTTCTATTGGTGCATCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGGCCAATACTTCTTAGTAGCTTCCTTTCTATTGGTGCATCTTTT  300

seq1  TGTATAACATTCAGGACCACCTGCCTGTGGACCACCACTCACAGTGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAACATTCAGGACCACCTGCCTGTGGACCACCACTCACAGTGGGCT  350

seq1  TAGACCCTCAATCAGTTATTACTCAGGAAACACACAAGCCAGTTGGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCCTCAATCAGTTATTACTCAGGAAACACACAAGCCAGTTGGATGT  400

seq1  GTGTGAAGTTTAAGTTGTGACGCTCTCCACTTAGATTACTTAAGCTCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAGTTTAAGTTGTGACGCTCTCCACTTAGATTACTTAAGCTCATA  450

seq1  TAAAATTAACAAAACAAAGAACAAAAACTAACCAGGGTAGAGCATCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAACAAAACAAAGAACAAAAACTAACCAGGGTAGAGCATCTGTC  500

seq1  TCATTTCTATAATCTACCCACAACCTGGCACCTGTTTCTCACAATGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTATAATCTACCCACAACCTGGCACCTGTTTCTCACAATGATAA  550

seq1  CCTCATAAAGATCAGACGCTAGATATGCATTCTTGGGTATAAAAATGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAAAGATCAGACGCTAGATATGCATTCTTGGGTATAAAAATGACT  600

seq1  GTCATATGTAATAGGACAAAAGAGCATGCCAGTCTTTAATTATTTATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATGTAATAGGACAAAAGAGCATGCCAGTCTTTAATTATTTATACT  650

seq1  CCTTGTCCCATTTTCCAATTCAATTTCCTCTTTAGGATGAAAGAACAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCCCATTTTCCAATTCAATTTCCTCTTTAGGATGAAAGAACAAGA  700

seq1  GTGCATTCATGAAACTAAGGCATGAAGTTTGATAAGAGTTCTAAAATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTCATGAAACTAAGGCATGAAGTTTGATAAGAGTTCTAAAATATC  750

seq1  TTGTATTACTTATCTTCCAGTTTATCCTAGCGAAAACAAAATCGATTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTACTTATCTTCCAGTTTATCCTAGCGAAAACAAAATCGATTTTT  800

seq1  ATGTAAGAATACATGATCAGTTAGATACCCAGTGTTATTGTATGATCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGAATACATGATCAGTTAGATACCCAGTGTTATTGTATGATCTTT  850

seq1  CTTCTTGTTCTAGGTATCAGACCAGAAACTCATTTACATAAAACACATGC  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTCTTGTTCTAGGTATCAGACCAGAAACTCATTTACAT-AAACACATGC  899

seq1  CTTAATTTTCTTTTAAAAATACTTGTGGTCCATTCCTGTCTCTTCTTAGA  950
      ||| ||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTT-ATTTTCTTTTAAAAATACTTGTGGTCCATTCCTGTCTCTTC-TAGA  947

seq1  TTGCAATACCATGCAATGAACTTCTGTGTAATAATAAAAGTTTAAGAAAG  1000
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGC-ATACCATGCAATGAACTTCTGTGT-ATAATAAAAGTTTAAGAAAG  995

seq1  CATAGAACTGTTGCTTTTGAAATTTTCAGAGTC-TCTTCTAACAAGCATT  1049
      |||||||||| ||| ||||||| |||||||||| | ||||||| ||||| 
seq2  CATAGAACTG-TGC-TTTGAAA-TTTCAGAGTCTTTTTCTAAC-AGCATA  1041

seq1  ACATAAGTATCTGGACAAGATG-ACATCATTCAGTTTAACATGG-ATATT  1097
      |||||||| |   ||||||||| |||||| |||||||||||||| |||| 
seq2  ACATAAGTTTTCTGACAAGATGAACATCA-TCAGTTTAACATGGAATATG  1090

seq1  GAATAGCCTGTTCTAGC  1114
      ||||||||   ||||||
seq2  GAATAGCC--GTCTAGC  1105


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