BAC Information

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BAC

Clone NameB6Ng01-102P20
Chromosome8 (Build37)
Map Location 131,049,664 - 131,171,166
singlet/doubletdoublet
Overlap geneLOC668494
Upstream genePard3, EG628847, Nrp1
Downstream geneItgb1, LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102P20.bB6Ng01-102P20.g
ACCDH911721DH911722
length1,1291,107
definitionDH911721|Mus musculus domesticus DNA, BAC clone: B6Ng01-102P20, 5' end.DH911722|Mus musculus domesticus DNA, BAC clone: B6Ng01-102P20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,170,029 - 131,171,166)(131,049,664 - 131,050,793)
sequence
gaattctctggattcacataaaactgagctcttgctaaacaccatagtca
gggaaacagctatagaaatcacatggggaccacccatctcaggcccgggt
cctgttcctaaagtgctcttcctgtccttatttcctactaggtctgattt
ttcatgtggaagaatgtcaatcagttgcatctaggcttgtttccagggag
cacagagctcagacccactacatgcctcctaaacaaatatatgtatatac
agaataagtcaggttaaagtcaggcaaacacctcagacaccacatcatag
gtttgaaagaggaagaataaagtgagtcatgacaggccgaaacctcgact
ccatcagaaccccctccatgcctggtcctgagtttgaaatccagcatttg
tcttaatcaaatttagacatagtcatgcattcttacttcctagatgtcag
ttcttttcctagggctgggaaattggaagggattcctgaggacatgtatt
gggataaatgtcttctcctggaagcaggactgaacccatagagattgcct
caaggcctggttccatgcagctggcctgtactctgaaggaagtggtcagc
caggggtggaatgacgtcagggacagctgagtgtctgccaccaacgagct
taggagagtttagtatgagggtgtgagcttagctcaagaggaaagtgagc
aagtggtattggtgtttatccgccgaacactgcgtctcaatgtcttgtta
gcccctacctgttttctgagaactttcccactcagtagattacctgctag
cttaaatgctatagcagaaaaatcccatgcccagcttctcagcaaggaaa
gctccctcactaatctccgggtcactgtccaattgttatgggtacacagt
ctcctatgaagtgactctggacctggaattcttccaccttggctttgcca
gctttggggtctggaggctctccagtagatgattctagaaaggtatccat
ttcactagaaatatctcattggaactcagggatgaagctttcatgtagta
ggagtgcagccattgtggtctttccttggtgccagagtagacaaactggt
ttgagaaacagtacgaaggcatggggggg
gaattcaatgcatacaagataactaagtgtgctcttattgattgtcctac
tgaagataagattttaggcggggacttgtcttcccttggcattttaaagg
cactggccccttgtcttctggcctttagttttacaactgagaaatcctgg
gttattctctcttcaccttttgtgtgtgacctgacttagggaacctgtaa
gacccatttcatatcataagtcccacaatgctatactcctgtggaagcca
tttttcagttctcaatgtgttgttctgagcatgttatggctcctttcaat
ttagaactgtggcctttggctcggaatttttttattgtattgatcctgtg
gtagttctgataccatcttctatttctttcactttctggttctgatttga
ctctgacaagtcaaatcttgcattttctcaccccttgatggatatctcat
tctttatttcttattctccatttctccctttatgccttgtgcattaattt
gtttggttttgttgttggttttcttgtttgtttgtttgtttgttttttag
acagagccttaccatgtagcccaaactggccttgaactcaaaattgttct
gcttcagtcttcagccacctaagactcatgcagatgtgtctaccatgccc
agattttaaaatacttttaatgacctatttttttcatctttctcccccga
ctttgctaacaaaacattagaagagaattggcaagatggtacagcacgtg
acagtgcttgtgtcacaagtctgacagaaagagttcaagccccagaactc
acacagtacaagaagaaaaccagctgtcctctgacctccacaggtacact
aatataattaaataaaataaataaataaataaataaatgaaataaaaaaa
tattaaataaatgtttaagagttgaaagagggaaactcttgttttagtct
ctgtgatgctttgtttctggttatttgctttccattttaagtatatttat
ttttgtttttgttttgggtgttatgccaaggtatcgtgcacatgtgctgt
actgcattgagccaaagagatgcctggtcttctgaactagagtatgatgt
tgttggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_131170029_131171166
seq2: B6Ng01-102P20.b_45_1173 (reverse)

seq1  CCCCCCCATGTGCTTTCCTTAACTGTTTCTTCAAACCAGTTTGTCTTCCT  50
      ||||||||  ||| ||| |  |||||||| ||||||||||||||| | ||
seq2  CCCCCCCA--TGCCTTCGT--ACTGTTTC-TCAAACCAGTTTGTC-TACT  44

seq1  CTTGGGCACCCA-GAAAGACCACAATGCCTGCACTCTAACTACATG-AAG  98
      ||  |||||| | |||||||||||||| ||||||||  |||||||| |||
seq2  CT--GGCACCAAGGAAAGACCACAATGGCTGCACTCCTACTACATGAAAG  92

seq1  CTTCATCCCTGAGTTCCAATGAGATATTTCTAGTGAAATGGATACCCCTT  148
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  CTTCATCCCTGAGTTCCAATGAGATATTTCTAGTGAAATGGATA-CCTTT  141

seq1  CTAGAATCATCTACTGGAGAGCCTCCAGACCCCAAAGCTGGCAAAGCCCA  198
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTAGAATCATCTACTGGAGAGCCTCCAGACCCCAAAGCTGGCAAAG-CCA  190

seq1  AGGTGGAAGAATTCCAGGTCCCAGAGTCACTTCATAGGAGACTGTGTACC  248
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGTGGAAGAATTCCAGGT-CCAGAGTCACTTCATAGGAGACTGTGTACC  239

seq1  CATAACAATTGGACAGTGACCCGGAGATTAGTGAGGGAGCTTTCCTTGCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACAATTGGACAGTGACCCGGAGATTAGTGAGGGAGCTTTCCTTGCT  289

seq1  GAGAAGCTGGGCATGGGATTTTTCTGCTATAGCATTTAAGCTAGCAGGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCTGGGCATGGGATTTTTCTGCTATAGCATTTAAGCTAGCAGGTA  339

seq1  ATCTACTGAGTGGGAAAGTTCTCAGAAAACAGGTAGGGGCTAACAAGACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTGAGTGGGAAAGTTCTCAGAAAACAGGTAGGGGCTAACAAGACA  389

seq1  TTGAGACGCAGTGTTCGGCGGATAAACACCAATACCACTTGCTCACTTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACGCAGTGTTCGGCGGATAAACACCAATACCACTTGCTCACTTTC  439

seq1  CTCTTGAGCTAAGCTCACACCCTCATACTAAACTCTCCTAAGCTCGTTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGCTAAGCTCACACCCTCATACTAAACTCTCCTAAGCTCGTTGG  489

seq1  TGGCAGACACTCAGCTGTCCCTGACGTCATTCCACCCCTGGCTGACCACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGACACTCAGCTGTCCCTGACGTCATTCCACCCCTGGCTGACCACT  539

seq1  TCCTTCAGAGTACAGGCCAGCTGCATGGAACCAGGCCTTGAGGCAATCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGAGTACAGGCCAGCTGCATGGAACCAGGCCTTGAGGCAATCTC  589

seq1  TATGGGTTCAGTCCTGCTTCCAGGAGAAGACATTTATCCCAATACATGTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTTCAGTCCTGCTTCCAGGAGAAGACATTTATCCCAATACATGTC  639

seq1  CTCAGGAATCCCTTCCAATTTCCCAGCCCTAGGAAAAGAACTGACATCTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAATCCCTTCCAATTTCCCAGCCCTAGGAAAAGAACTGACATCTA  689

seq1  GGAAGTAAGAATGCATGACTATGTCTAAATTTGATTAAGACAAATGCTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAAGAATGCATGACTATGTCTAAATTTGATTAAGACAAATGCTGG  739

seq1  ATTTCAAACTCAGGACCAGGCATGGAGGGGGTTCTGATGGAGTCGAGGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAACTCAGGACCAGGCATGGAGGGGGTTCTGATGGAGTCGAGGTT  789

seq1  TCGGCCTGTCATGACTCACTTTATTCTTCCTCTTTCAAACCTATGATGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCTGTCATGACTCACTTTATTCTTCCTCTTTCAAACCTATGATGTG  839

seq1  GTGTCTGAGGTGTTTGCCTGACTTTAACCTGACTTATTCTGTATATACAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGAGGTGTTTGCCTGACTTTAACCTGACTTATTCTGTATATACAT  889

seq1  ATATTTGTTTAGGAGGCATGTAGTGGGTCTGAGCTCTGTGCTCCCTGGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTTTAGGAGGCATGTAGTGGGTCTGAGCTCTGTGCTCCCTGGAA  939

seq1  ACAAGCCTAGATGCAACTGATTGACATTCTTCCACATGAAAAATCAGACC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCTAGATGCAACTGATTGACATTCTTCCACATGAAAAATCAGACC  989

seq1  TAGTAGGAAATAAGGACAGGAAGAGCACTTTAGGAACAGGACCCGGGCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGAAATAAGGACAGGAAGAGCACTTTAGGAACAGGACCCGGGCCT  1039

seq1  GAGATGGGTGGTCCCCATGTGATTTCTATAGCTGTTTCCCTGACTATGGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGGTGGTCCCCATGTGATTTCTATAGCTGTTTCCCTGACTATGGT  1089

seq1  GTTTAGCAAGAGCTCAGTTTTATGTGAATCCAGAGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGCAAGAGCTCAGTTTTATGTGAATCCAGAGAATTC  1129

seq1: chr8_131049664_131050793
seq2: B6Ng01-102P20.g_68_1174

seq1  GAATTCAATGCAGACAAGATAACTAAGTGTGCTCTTATTGATTGTCCTAC  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCATACAAGATAACTAAGTGTGCTCTTATTGATTGTCCTAC  50

seq1  TGAAGATAAGATTTTAGGCGGGGACTTGTCTTCCCTTGGCATTTTAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATAAGATTTTAGGCGGGGACTTGTCTTCCCTTGGCATTTTAAAGG  100

seq1  CACTGGCCCCTTGTCTTCTGGCCTTTAGTTTTACAACTGAGAAATCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCCCCTTGTCTTCTGGCCTTTAGTTTTACAACTGAGAAATCCTGG  150

seq1  GTTATTCTCTCTTCACCTTTTGTGTGTGACCTGACTTAGGGAACCTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCTCTCTTCACCTTTTGTGTGTGACCTGACTTAGGGAACCTGTAA  200

seq1  GACCCATTTCATATCATAAGTCCCACAATGCTATACTCCTGTGGAAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCATTTCATATCATAAGTCCCACAATGCTATACTCCTGTGGAAGCCA  250

seq1  TTTTTCAGTTCTCAATGTGTTGTTCTGAGCATGTTATGGCTCCTTTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGTTCTCAATGTGTTGTTCTGAGCATGTTATGGCTCCTTTCAAT  300

seq1  TTAGAACTGTGGCCTTTGGCTCGGAATTTTTTTATTGTATTGATCCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACTGTGGCCTTTGGCTCGGAATTTTTTTATTGTATTGATCCTGTG  350

seq1  GTAGTTCTGATACCATCTTCTATTTCTTTCACTTTCTGGTTCTGATTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCTGATACCATCTTCTATTTCTTTCACTTTCTGGTTCTGATTTGA  400

seq1  CTCTGACAAGTCAAATCTTGCATTTTCTCACCCCTTGATGGATATCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACAAGTCAAATCTTGCATTTTCTCACCCCTTGATGGATATCTCAT  450

seq1  TCTTTATTTCTTATTCTCCATTTCTCCCTTTATGCCTTGTGCATTAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTCTTATTCTCCATTTCTCCCTTTATGCCTTGTGCATTAATTT  500

seq1  GTTTGGTTTTGTTGTTGGTTTTCTTGTTTGTTTGTTTGTTTGTTTTTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTTTGTTGTTGGTTTTCTTGTTTGTTTGTTTGTTTGTTTTTTAG  550

seq1  ACAGAGCCTTACCATGTAGCCCAAACTGGCCTTGAACTCAAAATTGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCTTACCATGTAGCCCAAACTGGCCTTGAACTCAAAATTGTTCT  600

seq1  GCTTCAGTCTTCAGCCACCTAAGACTCATGCAGATGTGTCTACCATGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGTCTTCAGCCACCTAAGACTCATGCAGATGTGTCTACCATGCCC  650

seq1  AGATTTTAAAATACTTTTAATGACCTATTTTTTTCATC-TTCTCCCCCGA  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGATTTTAAAATACTTTTAATGACCTATTTTTTTCATCTTTCTCCCCCGA  700

seq1  CTTTGCTAACAAAACATTAGAAGAGAATTGGCAAGATGGTACAGCACGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTAACAAAACATTAGAAGAGAATTGGCAAGATGGTACAGCACGTG  750

seq1  ACAGTGCTTGTGTCACAAGTCTGACAGAAAGAGTTCAAGCCCCAGAACTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCTTGTGTCACAAGTCTGACAGAAAGAGTTCAAGCCCCAGAACTC  800

seq1  ACACAGTACAAGAAGAAAACCAGCTGTCCTCTGACCTCCACAGGTACACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTACAAGAAGAAAACCAGCTGTCCTCTGACCTCCACAGGTACACT  850

seq1  AATAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATGAAAT  899
      ||||   ||| ||||||||| |||||||   |||||||   |||||||||
seq2  AATA--TAATTAAATAAAAT-AAATAAA--TAAATAAA--TAAATGAAAT  893

seq1  AAAAAAATAATAAAATAAAATGTTTAAGAGGTTGAAAGAGGGAAACTCTT  949
      ||||||||| ||||   |||||||||||| ||||||||||||||||||||
seq2  AAAAAAATATTAAA--TAAATGTTTAAGA-GTTGAAAGAGGGAAACTCTT  940

seq1  GTTTTAGTCTCTGTGATTGCTTTGTTTTCTGGTTATTTGCTTTCCATTTT  999
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  GTTTTAGTCTCTGTGA-TGCTTTG-TTTCTGGTTATTTGCTTTCCATTTT  988

seq1  AAGTATATTTATTTTTGTTTTATGTTTTGGGTGTTATGCCCAGGTATCTG  1049
      ||||||||||||||||||||| |||||||||||||||||| ||||||| |
seq2  AAGTATATTTATTTTTGTTTT-TGTTTTGGGTGTTATGCCAAGGTATC-G  1036

seq1  TGCACCATGTGCATGTACTGCATTTGGAGGCCAGAGAGGATGCTCGTTCT  1099
      |||| ||||||| |||||||||||  || |||| ||| |||||  | |||
seq2  TGCA-CATGTGC-TGTACTGCATT--GA-GCCAAAGA-GATGCCTGGTCT  1080

seq1  TCTGGAGCTAGAGTTATAGATTGTTGTTGGC  1130
      ||| || |||||| ||| || ||||||||||
seq2  TCT-GAACTAGAG-TAT-GA-TGTTGTTGGC  1107