MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-103A13
Chromosome	8 (Build37)
Map Location	83,436,244 - 83,436,660
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Hhip, LOC546075, Gypa, Frem3, Smarca5, Gab1, LOC666237, LOC100039496
Downstream gene	LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852, Inpp4b
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hhip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15245 MGI:1341847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546075 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 97 ESTs, 4 Proteins pseudo : _no_value

name	Gypa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14934 MGI:95880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Frem3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333315 MGI:2685641
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 6 Proteins

name	Smarca5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93762 MGI:1935129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gab1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14388 MGI:108088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666237 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 23 Proteins pseudo : _no_value

name	LOC100039496 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	LOC234501 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:234501
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC100039518 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Usp38 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74841 MGI:1922091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG70793 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70793 MGI:3646552
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC236010 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:236010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 58 ESTs, 6 Proteins pseudo : _no_value

name	LOC384852 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384852
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins pseudo : _no_value

name	Inpp4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234515 MGI:2158925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hhip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328502 GeneID:15245 MGI:1341847
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hedgehog-interacting protein transcript_id : NM_020259.3

name	Gypa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185917 GeneID:14934 MGI:95880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycophorin A transcript_id : NM_010369.3

name	Frem3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383693 GeneID:333315 MGI:2685641
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 6 Proteins product : Fras1 related extracellular matrix protein 3 transcript_id : XM_984073.1

name	Smarca5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254123 GeneID:93762 MGI:1935129
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 transcript_id : NM_053124.2

name	Gab1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542870 GeneID:14388 MGI:108088
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth factor receptor bound protein 2-associated protein 1 transcript_id : NM_021356.2

name	LOC100039496 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258952 GeneID:100039496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100039496 transcript_id : XM_001472995.1

name	LOC100039518 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258954 GeneID:100039518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039518 transcript_id : XM_001473039.1

name	Usp38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328300 GeneID:74841 MGI:1922091
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 38 transcript_id : NM_027554.2

name	Inpp4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131212 GeneID:234515 MGI:2158925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol polyphosphate-4-phosphatase, type II transcript_id : NM_001024617.2

name	Hhip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328503 CCDS:CCDS22440.1 GeneID:15245 MGI:1341847
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IGI]; GO:0030324 - lung development [Evidence IMP]; GO:0045879 - negative regulation of smoothened signaling pathway [Evidence IDA]; GO:0007405 - neuroblast proliferation [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0040036 - regulation of fibroblast growth factor receptor signaling pathway [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0007224 - smoothened signaling pathway [Evidence IMP] codon_start : 1 exception : mismatches in translation note : hedgehog-interacting product : Hedgehog-interacting protein protein_id : NP_064655.3

name	Gypa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185918 GeneID:14934 MGI:95880
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0007016 - cytoskeletal anchoring [Evidence IMP]; GO:0047484 - regulation of response to osmotic stress [Evidence IMP] codon_start : 1 product : glycophorin A protein_id : NP_034499.3

name	Frem3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383694 GeneID:333315 MGI:2685641
definition	codon_start : 1 product : similar to FRAS1-related extracellular matrix protein 3 precursor (NV domain-containing protein 2) protein_id : XP_989167.1

name	Smarca5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254124 CCDS:CCDS22442.1 GeneID:93762 MGI:1935129
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence TAS] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence IDA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006338 - chromatin remodeling [Evidence IDA] codon_start : 1 product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein_id : NP_444354.2

name	Gab1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542871 CCDS:CCDS22443.1 GeneID:14388 MGI:108088
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IDA] GO_process : GO:0007257 - activation of JNK activity [Evidence IMP]; GO:0000187 - activation of MAPK activity [Evidence IDA]; GO:0030334 - regulation of cell migration [Evidence IGI]; GO:0006979 - response to oxidative stress [Evidence IDA]; GO:0007165 - signal transduction [Evidence IDA] codon_start : 1 product : growth factor receptor bound protein 2-associated protein 1 protein_id : NP_067331.2

name	LOC100039496 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258953 GeneID:100039496
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473045.1

name	LOC100039518 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258955 GeneID:100039518
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473089.1

name	Usp38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328301 CCDS:CCDS22444.1 GeneID:74841 MGI:1922091
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 38 protein_id : NP_081830.2

name	Inpp4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71725387 CCDS:CCDS22446.1 GeneID:234515 MGI:2158925
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence ISS]; GO:0016316 - phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity [Evidence IEA] GO_process : GO:0048016 - inositol phosphate-mediated signaling [Evidence ISS] codon_start : 1 note : inositol polyphosphate 4-phosphatase type II beta isoform product : inositol polyphosphate-4-phosphatase, type II protein_id : NP_001019788.1

name	LOC234501 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:234501
definition	number : 1 pseudo : _no_value

name	LOC384852 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384852
definition	number : 1 pseudo : _no_value

name	LOC546075 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258956 GeneID:546075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 97 ESTs, 4 Proteins product : similar to erythropoietin 4 immediate early response pseudo : _no_value transcript_id : XR_031274.1

name	LOC666237 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258957 GeneID:666237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 23 Proteins product : similar to lactate dehydrogenase 1, A chain pseudo : _no_value transcript_id : XR_031340.1

name	EG70793 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149258921 GeneID:70793 MGI:3646552
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG70793 transcript_id : XR_035158.1

name	LOC236010 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258958 GeneID:236010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 58 ESTs, 6 Proteins product : similar to Coenzyme Q10 homolog B (S. cerevisiae) pseudo : _no_value transcript_id : XR_031370.1

clone name	MSMg01-425N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545F08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-543K24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-461G22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-117N02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-186P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492I02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-363M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-403C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369E15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-291N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429B08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-137G08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-156O01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-123F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145N06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-103A13.b	B6Ng01-103A13.g
ACC	DH911749	DH911750
length	1,275	411
definition	DH911749\|Mus musculus domesticus DNA, BAC clone: B6Ng01-103A13, 5' end.	DH911750\|Mus musculus domesticus DNA, BAC clone: B6Ng01-103A13, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgtttagatctgttccacactttttaattgggtaatttttttca cgatgtccaggtttttgagttctgtatatatgttggatatatctctcaga aaagatataatcttttcccattctatagactaccacttcgtctgcatgac tgtaccctttgctttaaagaatcttttcatttcatgaggtcccatttatt aattttgatcttagtggctgcactaacagtgttctgttcagaaagtcttt tcctgtgccaatgagtttgagactcttctccactgttttttctattgtat acagtgtgtctggccctatgtcgaggtgtttgttttctgtacagcatgat aggtatggttctatttgtcttctacatgcagaaatctagtttgaccagcg ccatttgttgaagatgctgtatttttcccagtgtatatttctggcttctt tgtcaaaaatcaggtgtagatttgtctgggtttttgattcagttccattg atcagtagtgtctgtttctgtgctggtggcaccatgctggttttattact atagctctgtagtgcaactcgaaattagggataatgacacctccctaagt tcttcattacccaagattgttttagcatcctgaatttttgtttttctaag tgaaactgaaaattgtcctttgaagatctgtgaagaattgttgtgacatt ttgatggggattgcattgattctgtagactgcatttggtaggatggccat tgctactatattaatcctaatggtctctgaacatgagagatcttcccatc ttttaatatcttcttcaatttctttcttaaatctcttagttttctgggtt ttgtatcatacaagcctttaacctgcttgcgtagagtgacccggaggtgt tttatattagttgaggctgtagttgatgctgttgtgaaaggcgttgttgc ccttatttctttctcagtccactgtcatttgtacacaggcagctactgat ttttatgaattaccgtgtgtcaggtactttgctgaagggtttatcagcta ctagttcctggtagaatttttaggtcaaaatatttaataacatatcactg ttaagtaaaaatactttaaattcttctttgcaatttctttcccttgaacc ccctcagatggcctcggcttaagctaagactcaggtcattattggatagc tatggagagagggacaccttgtatggtgcaatcttatggcaatggtctcg aacactctctccaaataggagtaag	ctaagggggaaactcagctattcctccaggaaacagtacctgggaattct catcggtggtagctagccatatggtttttgttgtgggtttttattttgtt gttttttttttgttttgttttgttttttgtacgcttaaattcaataaagc agagggtgtgggaaggtactgggtagagaaagccccccccacccccttta atgtatgaaaagtatcctttactagagcctagaagactacttacccaaga cttggtggtgtgacctggacatgcattatccaatgcaggacacaaattag agtgcaagtccagaatccataattcaaaatcgtgtggttacagaatgtgc actctttcatggttttgatgagatttggttcagtttttaagtttgtgtgt atgaatgtgtg
quality values	Open. Hide. 11 8 10 13 61 47 43 31 47 61 47 47 47 61 47 61 47 43 61 61 61 38 32 61 52 16 16 12 9 8 11 12 12 11 7 28 23 33 59 61 61 61 61 59 55 59 59 59 59 49 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 17 14 27 12 18 18 24 29 35 35 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 55 55 55 59 59 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 44 55 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 59 61 61 61 59 61 52 59 59 61 61 59 59 59 59 59 59 52 59 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 52 53 61 61 57 57 57 45 53 57 53 57 57 57 50 57 57 57 53 57 57 53 53 57 53 53 57 57 53 57 53 53 53 53 53 53 57 53 47 57 53 53 47 57 57 45 57 57 43 47 52 57 50 53 57 57 53 57 57 53 36 57 57 57 57 47 35 57 57 57 57 53 45 33 46 41 52 53 53 57 47 45 57 57 53 57 57 45 45 57 52 45 52 47 50 53 53 53 52 57 42 37 32 50 52 43 33 53 46 57 37 57 37 30 53 41 32 57 52 50 53 52 45 45 43 57 57 57 53 43 42 53 57 57 53 31 20 52 53 44 30 38 41 50 42 38 52 53 53 41 30 50 21 57 42 50 53 36 37 42 57 53 50 34 28 53 28 37 40 24 46 46 16 26 33 39 40 52 44 42 36 48 42 37 37 42 40 40 40 41 40 37 53 40 40 52 37 57 53 29 53 33 48 40 37 40 53 37 30 41 44 53 31 48 30 33 25 37 40 44 48 57 37 29 40 40 36 57 57 41 32 32 30 30 29 47 30 38 44 33 31 30 29 27 28 46 30 31 29 45 39 32 25 32 31 51 30 29 31 30 37 27 27 44 25 48 47 45 29 29 29 33 51 46 22 51 51 36 31 26 34 33 37 25 33 33 29 26 33 28 39 33 28 51 32 31 33 23 31 28 39 32 31 29 29 28 28 29 38 24 41 28 29 29 30 30 36 30 28 23 46 17 36 19 29 24 51 51 34 33 28 31 30 27 41 22 29 43 34 41 20 36 24 29 29 23 24 19 34 29 29 14 4 12 18 35 43 21 33 30 27 29 27 46 13 13 29 14 20 23 33 38 18 31 27 28 51 33 27 27 24 28 51 26 28 30 51 29 25 21 31 31 19 28 29 23 9 13 9 29 26 28 23 32 51 30 29 22 27 28 12 28 9 20 20 22 11 13 12 22 26 25 28 35 30 19 51 51 51 21 18 22 28 30 24 18 14 18 5 16 22 13 10 4 5 13 8 15 25 30 19 23 14 20 39 17 30 28 25 22 31 10 10 11 4 6 28 15 9 6 15 21 19 33 20 19 23 19 26 6 13 24 10 16 22 18 22 5 4 5 14 26 7 31 42 34 17 5 6 17 8 17 6 4 4 5 6 12 9 8 6 6 13 9 10 10 30 9 12 9 4 6 7 29 9 10 4 5 22 23 4 6 20 22 29 27 23 9 19 10 8 27 9 18 26 17 11 5 6 15 7 13 4 29 9 22 11 22 9 13 24 5 4 6 26 4 4 24 11 2 5 12 4 4 4 4 10 13 5 8 5 6 13 9 16 5 2 3 4 3 1 3 7 9 11 20 7 10 7 19 4 20 19 5 18 4 6 3 5 3 3 4 3 5 5 4 5 4 10 6 5 13 8 6 3 1 2 5 3 5 6 6 4 12 7 16 9 6 14 3 4 3 3 4 12 3 5 11 8 8 6 3 3 5 5 5 7 5 3 17 8 7 5 6 7 5 7 7 3 3 8 6 3 13 4 4 8 7 3 6 7 5 9 4 6 4 4 6 10 13 5 6 7 5 3 3 3 8 4 5 3	Open. Hide. 23 19 19 18 12 26 24 26 24 59 59 59 59 59 61 59 59 61 61 61 61 61 61 59 61 61 59 49 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 59 52 37 36 49 52 37 36 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 44 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 52 61 59 61 61 59 61 61 61 61 61 61 61 59 61 50 44 59 59 59 59 61 61 61 59 61 59 61 61 61 59 61 61 61 61 61 59 59 59 44 59 59 61 59 59 59 61 59 59 59 61 61 59 52 59 59 61 59 61 59 59 59 59 61 59 61 61 59 59 59 59 59 59 43 59 52 59 61 59 61 49 61 61 59 61 61 61 61 61 59 59 49 44 43 41 52 59 45 59 59 59 59 61 59 59 61 61 59 59 59 59 59 59 59 61 61 59 59 61 61 59 59 59 45 59 59 61 59 59 59 59 59 59 61 59 59 52 61 61 59 52 52 45 35 52 59 59 59 49 61 59 59 61 52 52 59 52 59 59 61 59 49 61 59 59 55 55 52 55 52 55 55 52 61 61 61 61 61 61 55 55 52 61 55 61 61 49 55 55 61 55 55 61 55 52 55 49 52 52 43 55 61 61 61 50 41 37 37 49 50 55 43 55 55 61 55 55 55 55 61 49 55 47 55 55 55 61 34 49 14 13 7 13 16 19 39 50 31 50 43 52 61 61 61 50 53 50 61 35 31 35 33 50 43 50 53 47 50 38 26

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_83436244_83436660
seq2: B6Ng01-103A13.g_67_483 (reverse)

seq1  CACACATTCATACACACAAACTTAAAAACTGAACCAAATCTCATCAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTCATACACACAAACTTAAAAACTGAACCAAATCTCATCAAAAC  50

seq1  CATGAAAGAGTGCACATTCTGTAACCACACGATTTTGAATTATGGATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGAGTGCACATTCTGTAACCACACGATTTTGAATTATGGATTCT  100

seq1  GGACTTGCACTCTAATTTGTGTCCTGCATTGGATAATGCATGTCCAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGCACTCTAATTTGTGTCCTGCATTGGATAATGCATGTCCAGGTC  150

seq1  ACACCACCAAGTCTTGGGTAAGTAGTCTTCTAGGCTCTAGTAAAGGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACCAAGTCTTGGGTAAGTAGTCTTCTAGGCTCTAGTAAAGGATAC  200

seq1  TTTTCATACATTAAAGGGGGTGGGGGGGGCTTTCTCTACCCAGTACCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATACATTAAAGGGGGTGGGGGGGGCTTTCTCTACCCAGTACCTTC  250

seq1  CCACACCCTCTGCTTTATTGAATTTAAGCGTACAAAAAACAAAACAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCTCTGCTTTATTGAATTTAAGCGTACAAAAAACAAAACAAAAC  300

seq1  AAAAAAAAAACAACAAAATAAAAACCCACAACAAAAACCATATGGCTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACAACAAAATAAAAACCCACAACAAAAACCATATGGCTAGC  350

seq1  TACCACCGATGAGAATTCCCAGGTACTGTTTCCTGGAGGAATAGCTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACCGATGAGAATTCCCAGGTACTGTTTCCTGGAGGAATAGCTGAGT  400

seq1  TTCCCCCTTAGGAATTC  417
      |||||||||||||||||
seq2  TTCCCCCTTAGGAATTC  417

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information