BAC Information

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BAC

Clone NameB6Ng01-103G08
Chromosome8 (Build37)
Map Location 40,532,841 - 40,670,427
singlet/doubletdoublet
Overlap geneLOC434304
Upstream geneTusc3, LOC100038974, LOC632066, EG621335
Downstream geneMsr1, EG621431, LOC100039072, LOC666959, EG632166, Fgf20, 2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103G08.bB6Ng01-103G08.g
ACCDH911999DH912000
length1,2151,085
definitionDH911999|Mus musculus domesticus DNA, BAC clone: B6Ng01-103G08, 5' end.DH912000|Mus musculus domesticus DNA, BAC clone: B6Ng01-103G08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,669,194 - 40,670,427)(40,532,841 - 40,533,539)
sequence
gaattcctcacggtgtggtgaatcccaaccataaaattatttttattgct
gcttcataactgtaattttgctactgatgtgaatcataatatgaatatct
gtgtcttcagatggtcttaggtccctgtgaggggtcattgacagccccca
agggagctgagaacctcaggttgtgaactagtggcttatagagtaaacag
aattatatggaattatagctaggaaagcatcttcaagcactcaaaacgtt
cccatggttactgaatactcttcaactagtaaaggcaatagtcattgaag
gtatcttatattttatcacctatatatgtcctaagtataaggtctagaat
aataatcagaaattgtgggtgcacaaataaacaacagatttataaatagc
agagttttctgctattacattggtgacgtcaagtgttttgcctacctacc
tacagaaacccccaggtagaagccattcttaaagagtatggatttggttt
ctttgcactcaaaacaggttcatggtatggttaaatctaagaatgcagag
gaatgcagtgatattgattggcttgaggcagacttaacataaggattctg
tgtggcttttgggtgcagttcttatttctgcatgattttctgttctgtca
gtcgaagaattgaacaaaaatgaaatttaactatttgaatattagtgaga
gattcagtgagtcaccaaattgaacgaaccatgaatgtgtcctgtgtcac
atgaacagtctttgaagagtcagcctgcattttcattatgacccttgagc
accagtgtactaacacccatgaaattgcttggtcacagtttctaaaatca
tgtgtgctcacacatcagcacattgaatatgtaatttcttttttcatgga
atagctacaaccaatgagattcttctcactctcattttctttcactcaat
gacaaaaactatactgctaagctttggacaaaatgatatagctataaaat
aattcagagcatgcctatcaaggtagcttggaacagggacatgaactttt
cattcttcttgtcttcagaaggataaaaaaaaatcatggtttctcgagtt
cacatgtgatatttacatctatgatttgatgatttaattctctgcctgta
ctctttatgaataacatgggaatgaccattactccttatatttcctgcac
ttgagatccttgggg
gaattctttgtttggctttgtaccccattttaataggattatttgtttct
aactccttgagtcttatttagacttatttgaatctaacttcttgagtttt
ttgtatatattggatattatccctctatcagatgtaggattggtaaagat
cttttcccaatatatgttggttgctgttttgtcctattgacagtgtcctt
tgccttacagaacttttgcaattttatgaggtcccatttgtcaattcttg
atcttagagcaaaagctattgatgttctgttcaggaaaatttcccctgtg
cccacatgcttgaggctcttccccactttctttctattagtttcagtgta
tctggttttatgtagaggatcttgacgcacttggacttgagctttgtaca
aggagctaagaatggattgatttgcattcttctacatgctaaccaccatt
tgatccggcaccatttgttgaaaatgctgtcttttttccactggatggtt
ttagctccattctcaaagatcaattgaccataggtgtgtgtgttcatttc
tggctcttcaattctattccattgatctacctgcctttcactgtaccaat
tccatgcagttttttatcacaactgctctgtagtacagcttgaggtcagg
gatggtgattccaccagaagttattttattgttgagaatagttttgctac
cctaggtttttgttattccagatgaatttacaaattgctctttctaattc
tgtgaagaattgagttggaattttgatggggattacattgaatctgtaga
ttgctttcagcatgatggccatgttttctatattatcctgccaatccatg
agcatgggatatgtttccattcctctgaggtcttttgaaaagatccgcta
tgctcacagaaagaaattgaaaccactagcgttttagtattctcaatcta
ttagcgtcttttaagtctttaacatgaatgattatgtgtggccactgcac
ttgtatttaaacaaaatcctgactgatgcttttatttagagattagaggt
tatggtttatttttgacctatagaatctcttggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_40669194_40670427
seq2: B6Ng01-103G08.b_49_1263 (reverse)

seq1  CCCCAAGGGATACTCAAAGAGTGCAGGAAAATAATAAGAATGTATGGTCA  50
      |||||| |||| ||||   |||||||||||   ||||| |   |||||||
seq2  CCCCAA-GGAT-CTCA---AGTGCAGGAAA--TATAAGGAGTAATGGTCA  43

seq1  TTCCCATGTTA-TCATAAAAAGAGTACAAAGCAGAGGAATATATCAATCA  99
      ||||||||||| ||||  ||||||||| | |||||| | || ||| ||||
seq2  TTCCCATGTTATTCAT--AAAGAGTAC-AGGCAGAGAATTAAATC-ATCA  89

seq1  TATTCATTAGATGTAAATTATTTACATGTGAAACTCTGGAGAAACCATGA  149
       | ||| |||||||||||   | |||||||||   || ||||||||||||
seq2  -AATCA-TAGATGTAAAT--ATCACATGTGAA---CTCGAGAAACCATGA  132

seq1  -TTTTTTTTATCCTTCTGGAGAC-AGGAGAATGGAAAAGTTCATGGTCCC  197
       ||||||||||||||||| |||| || ||||| ||||||||||| |||||
seq2  TTTTTTTTTATCCTTCTGAAGACAAGAAGAAT-GAAAAGTTCAT-GTCCC  180

seq1  TGTTCCAAGGCTACCTTGATAGGCATGCTCTGAATTATTTTATAGCTATA  247
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAA-GCTACCTTGATAGGCATGCTCTGAATTATTTTATAGCTATA  229

seq1  TTCATTTTGTCCAGAGCTTAGCAGTATAGTTTTTGTCATTGAGTGAAAGA  297
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  -TCATTTTGTCCAAAGCTTAGCAGTATAGTTTTTGTCATTGAGTGAAAGA  278

seq1  AAATTGAGAGTGAGAAGAATCTCATTGGTTGTAGCTATTCCATGAGAAAA  347
      ||| ||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAA-TGAGAGTGAGAAGAATCTCATTGGTTGTAGCTATTCCATGAAAAAA  327

seq1  GAAATTACATATTCAATGTGCTGATGTGTGAGCACACATGATTTTAGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTACATATTCAATGTGCTGATGTGTGAGCACACATGATTTTAGAAA  377

seq1  CTGTGACCAAGCAA-TTCATGGGTGTTAGTACACTGGTGCTCAAGGGTCA  446
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTGTGACCAAGCAATTTCATGGGTGTTAGTACACTGGTGCTCAAGGGTCA  427

seq1  TAATGAAAATGCAGGCTGACTCTTCAAAGACTGTTCATGTGACACAGGAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAATGCAGGCTGACTCTTCAAAGACTGTTCATGTGACACAGGAC  477

seq1  ACATTCATGGTTCGTTCAATTTGGTGACTCACTGAATCTCTCACTAATAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATGGTTCGTTCAATTTGGTGACTCACTGAATCTCTCACTAATAT  527

seq1  TCAAATAGTTAAATTTCATTTTTGTTCAATTCTTCGACTGACAGAACAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAGTTAAATTTCATTTTTGTTCAATTCTTCGACTGACAGAACAGA  577

seq1  AAATCATGCAGAAATAAGAACTGCACCCAAAAGCCACACAGAATCCTTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGCAGAAATAAGAACTGCACCCAAAAGCCACACAGAATCCTTAT  627

seq1  GTTAAGTCTGCCTCAAGCCAATCAATATCACTGCATTCCTCTGCATTCTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTCTGCCTCAAGCCAATCAATATCACTGCATTCCTCTGCATTCTT  677

seq1  AGATTTAACCATACCATGAACCTGTTTTGAGTGCAAAGAAACCAAATCCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAACCATACCATGAACCTGTTTTGAGTGCAAAGAAACCAAATCCA  727

seq1  TACTCTTTAAGAATGGCTTCTACCTGGGGGTTTCTGTAGGTAGGTAGGCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTTAAGAATGGCTTCTACCTGGGGGTTTCTGTAGGTAGGTAGGCA  777

seq1  AAACACTTGACGTCACCAATGTAATAGCAGAAAACTCTGCTATTTATAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTGACGTCACCAATGTAATAGCAGAAAACTCTGCTATTTATAAA  827

seq1  TCTGTTGTTTATTTGTGCACCCACAATTTCTGATTATTATTCTAGACCTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTTTATTTGTGCACCCACAATTTCTGATTATTATTCTAGACCTT  877

seq1  ATACTTAGGACATATATAGGTGATAAAATATAAGATACCTTCAATGACTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAGGACATATATAGGTGATAAAATATAAGATACCTTCAATGACTA  927

seq1  TTGCCTTTACTAGTTGAAGAGTATTCAGTAACCATGGGAACGTTTTGAGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTACTAGTTGAAGAGTATTCAGTAACCATGGGAACGTTTTGAGT  977

seq1  GCTTGAAGATGCTTTCCTAGCTATAATTCCATATAATTCTGTTTACTCTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAAGATGCTTTCCTAGCTATAATTCCATATAATTCTGTTTACTCTA  1027

seq1  TAAGCCACTAGTTCACAACCTGAGGTTCTCAGCTCCCTTGGGGGCTGTCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCACTAGTTCACAACCTGAGGTTCTCAGCTCCCTTGGGGGCTGTCA  1077

seq1  ATGACCCCTCACAGGGACCTAAGACCATCTGAAGACACAGATATTCATAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCCTCACAGGGACCTAAGACCATCTGAAGACACAGATATTCATAT  1127

seq1  TATGATTCACATCAGTAGCAAAATTACAGTTATGAAGCAGCAATAAAAAT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTCACATCAGTAGCAAAATTACAGTTATGAAGCAGCAATAAAAAT  1177

seq1  AATTTTATGGTTGGGATTCACCACACCGTGAGGAATTC  1234
      ||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATGGTTGGGATTCACCACACCGTGAGGAATTC  1215

seq1: chr8_40532841_40533539
seq2: B6Ng01-103G08.g_457_1152

seq1  AGCTTTGTACAAGGAGCTAAGAATGGATTGATTTGCATTCTTCTACATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGTACAAGGAGCTAAGAATGGATTGATTTGCATTCTTCTACATGC  50

seq1  TAACCACCATTTGATCCGGCACCATTTGTTGAAAATGCTGTCTTTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACCATTTGATCCGGCACCATTTGTTGAAAATGCTGTCTTTTTTCC  100

seq1  ACTGGATGGTTTTAGCTCCATTCTCAAAGATCAATTGACCATAGGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATGGTTTTAGCTCCATTCTCAAAGATCAATTGACCATAGGTGTGT  150

seq1  GTGTTCATTTCTGGCTCTTCAATTCTATTCCATTGATCTACCTGCCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATTTCTGGCTCTTCAATTCTATTCCATTGATCTACCTGCCTTTC  200

seq1  ACTGTACCAATTCCATGCAGTTTTTTATCACAACTGCTCTGTAGTACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACCAATTCCATGCAGTTTTTTATCACAACTGCTCTGTAGTACAGC  250

seq1  TTGAGGTCAGGGATGGTGATTCCACCAGAAGTTATTTTATTGTTGAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTCAGGGATGGTGATTCCACCAGAAGTTATTTTATTGTTGAGAAT  300

seq1  AGTTTTGCTACCCTAGGTTTTTGTTATTCCAGATGAATTTACAAATTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGCTACCCTAGGTTTTTGTTATTCCAGATGAATTTACAAATTGCT  350

seq1  CTTTCTAATTCTGTGAAGAATTGAGTTGGAATTTTGATGGGGATTACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAATTCTGTGAAGAATTGAGTTGGAATTTTGATGGGGATTACATT  400

seq1  GAATCTGTAGATTGCTTTCAGCATGATGGCCATGTTTTCTATATTAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAATCTGTAGATTGCTTTCAGCATGATGGCCATGTTTTCTATATT-ATCC  449

seq1  TGCCAATCCATGAGCATGGGATATGTTTCCATTCCTCTGAGGTCTTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATCCATGAGCATGGGATATGTTTCCATTCCTCTGAGGTCTTTTGA  499

seq1  AAAGATCCGCTATGCTCACAGAAAGAAATTGAAACCACTAGCGTTTTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAGATCCGCTATGCTCACAGAAAGAAATTGAAACCACTAGCG-TTTTAG  548

seq1  TATTCTCAATCTATTAGCGTCTTTTAGGTCTTTAACATGAATGA-TATGT  599
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  TATTCTCAATCTATTAGCGTCTTTTAAGTCTTTAACATGAATGATTATGT  598

seq1  GTGG-CACTGCACTTTGTATTTAAACAAAATCCTGACTGAATGCTTTTAT  648
      |||| |||||||| ||||||||||||||||||||||||| ||||||||||
seq2  GTGGCCACTGCAC-TTGTATTTAAACAAAATCCTGACTG-ATGCTTTTAT  646

seq1  TTAGAGATTTAGTAGGTTATGGTTTATTTTTGA-CTATAGAATACTTTGG  697
      ||||||| |||| |||||||||||||||||||| |||||||||   ||||
seq2  TTAGAGA-TTAG-AGGTTATGGTTTATTTTTGACCTATAGAATCTCTTGG  694

seq1  AA  699
      ||
seq2  AA  696