BAC Information

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BAC

Clone NameB6Ng01-103M22
Chromosome8 (Build37)
Map Location 53,490,703 - 53,491,837
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
Downstream geneLOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103M22.bB6Ng01-103M22.g
ACCDH912284DH912285
length1,1891,125
definitionDH912284|Mus musculus domesticus DNA, BAC clone: B6Ng01-103M22, 5' end.DH912285|Mus musculus domesticus DNA, BAC clone: B6Ng01-103M22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaatgatacctattcagtaacattcaaattacctctagt
attgtaggggggtagtgaaagaaatcagacattacaatttacttaaatag
agctagtaatctcagggctagtctatatagtaaatacttagaacaatagc
tgagtcattcccatacacaggaatttagaaagaagaaggtggattgtggt
ttcaagacgaactgtagtattattcgtgaaagggtaagtagaacagaatt
cctccggtgcatgttttttcactaggcccagtggaataatagcataatca
ggtatttactaagggactcctagtggtgggtttaacaatagactagcatt
gcaccagaccattcacctggctcctgtgtttagctgatcttagatagagc
tgttccaatctcagtagtaaacactgcctggctctccctagctttttatg
gattcattttctttgttttgtatacagaaccattatctatgtaccttggc
agatgtattcgcctagctttcttgtttttcttctgtattattaagactgg
tcctcggttttgagaaattacattcagatactatactcccttgtgtccat
gtctgtttgtcaccctttttacgtccaactcctgcccacatgtaacagaa
tcctgatttctcctgcggattgaggggggcccaatgaggccagtctgagg
caccgatttaactttggtacctgttatctgtttagaaaattgtccaattc
atccaagttttcctgttttgttgggtataggcttttgtagcacgatttct
taattaggttactatttctgtgccctctgatttgtctggccaagggttta
tctatctatctttttttttttttttctcaaagagccagttcctgggtttg
ggttgatcctttgtatagttctttttgtttctattttgttgatttcagcc
ctgagttgattatttttctaccatctaatcctcttgggtgtatttgcttc
ttttgtctagaacttcaggtgtgctgtcagctgctagtatatgctctctc
attccttttgaaagcaccagagctatggttttcttctagcactgctcatg
ggtccataagtttttatgttgggcttcatatcattaagcttaaagccgtg
acttccaatcttctggaccagctgtcaattaatagagag
gaattcagtgtttatctgatggtttctaatacttctttggggttttcagc
ttgtcttgaactttccatggatattcacttttagggtaaatctacatggc
accaccaaatgtagttagtatccttgtataagccccacaatgaggcaagt
ttacatacttataatatgctttgattaaaatttgggtcagtttctagtct
tgttattaaactgattcattttttgtgcttgaaaaataaataatagacta
catagtaataaatggttttatattatcagtacactgttataaatgagaga
ctcaaagctatgaaattgtgatatttttcacaaaacaacatatgttatta
atacaaaactttctcatacctggagtcctcaaagacatttaagcttcaca
tagttttctagcttaaaagtactgtagtaattttatttttaagttgaaaa
agaacattctgtttatcaaattgacttgaaagctgaaatggtagatttta
aaaatgtaaatctaataaagatgcaatttgaaattcaaatatatcttagg
taatcctagcttccccagaagtttctatataagtctcataatcgatgatt
tcagagtgacctatctgtctttgtatgcccatacaacagttctgtaaagt
taaaacttcatagtcttatacaaaacataatcattaaatgataaatacaa
ggacttttctataatttattttttcatatttaagacagaataaagaacat
gatgcaattcaactatgaaaagatggatggttttaaaatcatttataaat
cattttaagttttccatcatgtattgaaattgccttttggtgaatgagaa
ctaaaagaaaatataaatggatgtattatctcttggaactttgctttcag
taaaatattttaaaatttcttaatgtaaatacttttattagtgtgttatc
tacatagcattctaaaataatttactttctacatatctatatctatcttt
gacaattttatacatatagtttgatatttactctactctcaaagattcat
tcacttcttacatacccacctttatagcttttcaaatttaataatgtacc
ttgtacctctcatatatttttgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53490703_53491837
seq2: B6Ng01-103M22.g_68_1192 (reverse)

seq1  ACCC-AAAATATATGAGAAGTACAAGTTACATTTATTAAATTTTTGAAAA  49
      |||| ||||||||||||| ||||||| |||| ||||||||  ||||||||
seq2  ACCCAAAAATATATGAGAGGTACAAGGTACA-TTATTAAA--TTTGAAAA  47

seq1  GCTATAAAGTTGGGTATGTAAGGAAGGTGAAATGAATCTTTGAGGAGTTA  99
      ||||||||| ||||||||||||  | ||| ||||||||||||| ||| ||
seq2  GCTATAAAGGTGGGTATGTAAG--AAGTG-AATGAATCTTTGA-GAG-TA  92

seq1  GAGGTAAATATCAAACTATATTGTATAAAATTGTCAAAGATAGATATAGA  149
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GA-GTAAATATCAAACTATA-TGTATAAAATTGTCAAAGATAGATATAGA  140

seq1  TATGTAGAAAGTAAATTATTTTAGAATGCTATGTAGATAACACCACTAAT  199
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATGTAGAAAGTAAATTATTTTAGAATGCTATGTAGATAACA-CACTAAT  189

seq1  AAAAGTATTTACATTAAGAAATTTTAAAATATTTTACTGAAAGCAAAGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATTTACATTAAGAAATTTTAAAATATTTTACTGAAAGCAAAGTT  239

seq1  CCAAGAGATAATACATCCATTTATATTTTCTTTTAGTTCTCATTCACCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGATAATACATCCATTTATATTTTCTTTTAGTTCTCATTCACCAA  289

seq1  AAGGCAATTTCAATACATGATGGAAAACTTAAAATGATTTATAAATGATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAATTTCAATACATGATGGAAAACTTAAAATGATTTATAAATGATT  339

seq1  TTAAAACCATCCATCTTTTCATAGTTGAATTGCATCATGTTCTTTATTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCATCCATCTTTTCATAGTTGAATTGCATCATGTTCTTTATTCT  389

seq1  GTCTTAAATATGAAAAAATAAATTATAGAAAAGTCCTTGTATTTATCATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAATATGAAAAAATAAATTATAGAAAAGTCCTTGTATTTATCATT  439

seq1  TAATGATTATGTTTTGTATAAGACTATGAAGTTTTAACTTTACAGAACTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATTATGTTTTGTATAAGACTATGAAGTTTTAACTTTACAGAACTG  489

seq1  TTGTATGGGCATACAAAGACAGATAGGTCACTCTGAAATCATCGATTATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGGGCATACAAAGACAGATAGGTCACTCTGAAATCATCGATTATG  539

seq1  AGACTTATATAGAAACTTCTGGGGAAGCTAGGATTACCTAAGATATATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTATATAGAAACTTCTGGGGAAGCTAGGATTACCTAAGATATATTT  589

seq1  GAATTTCAAATTGCATCTTTATTAGATTTACATTTTTAAAATCTACCATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCAAATTGCATCTTTATTAGATTTACATTTTTAAAATCTACCATT  639

seq1  TCAGCTTTCAAGTCAATTTGATAAACAGAATGTTCTTTTTCAACTTAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTCAAGTCAATTTGATAAACAGAATGTTCTTTTTCAACTTAAAA  689

seq1  ATAAAATTACTACAGTACTTTTAAGCTAGAAAACTATGTGAAGCTTAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTACTACAGTACTTTTAAGCTAGAAAACTATGTGAAGCTTAAAT  739

seq1  GTCTTTGAGGACTCCAGGTATGAGAAAGTTTTGTATTAATAACATATGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGAGGACTCCAGGTATGAGAAAGTTTTGTATTAATAACATATGTT  789

seq1  GTTTTGTGAAAAATATCACAATTTCATAGCTTTGAGTCTCTCATTTATAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTGAAAAATATCACAATTTCATAGCTTTGAGTCTCTCATTTATAA  839

seq1  CAGTGTACTGATAATATAAAACCATTTATTACTATGTAGTCTATTATTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTACTGATAATATAAAACCATTTATTACTATGTAGTCTATTATTTA  889

seq1  TTTTTCAAGCACAAAAAATGAATCAGTTTAATAACAAGACTAGAAACTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAGCACAAAAAATGAATCAGTTTAATAACAAGACTAGAAACTGA  939

seq1  CCCAAATTTTAATCAAAGCATATTATAAGTATGTAAACTTGCCTCATTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATTTTAATCAAAGCATATTATAAGTATGTAAACTTGCCTCATTGT  989

seq1  GGGGCTTATACAAGGATACTAACTACATTTGGTGGTGCCATGTAGATTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTATACAAGGATACTAACTACATTTGGTGGTGCCATGTAGATTTA  1039

seq1  CCCTAAAAGTGAATATCCATGGAAAGTTCAAGACAAGCTGAAAACCCCAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAAGTGAATATCCATGGAAAGTTCAAGACAAGCTGAAAACCCCAA  1089

seq1  AGAAGTATTAGAAACCATCAGATAAACACTGAATTC  1135
      ||||||||||||||||||||||||||||||||||||
seq2  AGAAGTATTAGAAACCATCAGATAAACACTGAATTC  1125